Basic Information

Insect: Cecidostiba fungosa
Gene Symbol: -
Assembly: GCA_900474305.1
Location: UCOJ01001010.1:30453-32471[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00023 0.019 15.5 0.4 1 23 272 295 272 295 0.97

2 10 5.8e-06 0.00049 20.5 0.5 1 23 301 323 301 323 0.99

3 10 1.1e-07 9.3e-06 25.9 0.3 1 23 329 351 329 351 0.99

4 10 0.033 2.8 8.7 0.7 1 23 357 379 357 379 0.98

5 10 5e-06 0.00042 20.7 0.2 1 20 385 404 385 405 0.96

6 10 0.008 0.67 10.6 3.1 1 23 414 434 414 434 0.95

7 10 1.2e-06 0.0001 22.6 0.5 3 23 442 462 441 462 0.98

8 10 0.00012 0.01 16.3 1.4 1 23 468 490 468 490 0.98

9 10 0.0024 0.2 12.3 2.6 1 21 496 516 496 519 0.96

10 10 0.42 36 5.2 1.2 1 20 525 544 525 546 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00023	0.019	15.5	0.4	1	23	272	295	272	295	0.97
2	10	5.8e-06	0.00049	20.5	0.5	1	23	301	323	301	323	0.99
3	10	1.1e-07	9.3e-06	25.9	0.3	1	23	329	351	329	351	0.99
4	10	0.033	2.8	8.7	0.7	1	23	357	379	357	379	0.98
5	10	5e-06	0.00042	20.7	0.2	1	20	385	404	385	405	0.96
6	10	0.008	0.67	10.6	3.1	1	23	414	434	414	434	0.95
7	10	1.2e-06	0.0001	22.6	0.5	3	23	442	462	441	462	0.98
8	10	0.00012	0.01	16.3	1.4	1	23	468	490	468	490	0.98
9	10	0.0024	0.2	12.3	2.6	1	21	496	516	496	519	0.96
10	10	0.42	36	5.2	1.2	1	20	525	544	525	546	0.93

Sequence Information

Coding Sequence: ATGACGAACACGATGGAAGAGGAGGAGGTCCAGCTGACGGAACTCAGGCCTGTCGAACAGTCCTGGATCAAGGAGACCGACGACAAGGATGGAAATGCTACCGATGGATTGAAAGCTCTCAGAAGCTTCTCCAGGAGACAGGTCGACGAGTTGGAACACTTCGGAGCTGGGTACCCCAGGAAACGTAAAGCCGACAGGTGGAAGCACACCGAGTTTGGTGTTCACAGTGATGTtgatgaggaggaggatgtGATTGACAAGTgcccgaagaagaagaagaagcaactCGAGAAGAAGAGCTTCAACGAACTCAGCGATGACTTCGACGAGGAGGACGTCGAGTTCTACGGAGTCAACGGTGACTTCGAGTACCTGGAGGACaggaacgacgacgagatctACGTCTATAGACAGAGGGACTCGTGTTCCAGTCCAGAGGCGGAGACCGAAGACGGGATACCCAGTACCGCGGAGAACGAGAAGCTGGAGAACGTCATCGAGCAGCAGAAAGCCAAGGTCGTCGAGAAGACCAAACCCGTCCCGGTACCCAGACCCAGAGGAAGACCCAGGAAGAAGAGACGAGGAGTCGCCCCGAAGCCCAAGGAGGTTGTGCTGGAGAAGGAACCGGAACAGCCGACGTCGGCGATCGACTCCGAGAAGGAACTTCAGAGCAAGATCAATGACATCATCCAGGCGAACTACCTCCTGGAGCAGGAGAACAACAACAtcgtcgagagcgagagcaacTCTCGGGCACAGGAGGACAGCACCACCTCCTCCAAGGAGAACGACTCCGAGGAACCCGAGAAGAAGTACCGCTGCGACCTCTGCAAGGCGCGTTTCAAGGGCAGCGGTGGTCTCCGGAACCACTACAAGGTCGTCCACGCGACCGGGCCGCTCTTCAAGTGCGACGAGTGCGGCAAGGAGTTTCCTCTCAAGGAACGACTCAAGCTCCACGTCCGCACCCACACCGGCTTCAAACCCTACAAGTGCCCGGAGTGCGACAAGAGCTTCGCTCGAGGTGGTCAACTGGTCCAGCACCGGCGAACCCACAGCCAGGTCAAACCTTACAGCTGCGACCTCTGCTCCGGGACGTTCACCTGCGCTGCCAACCTGGCGCTCCACGTCAAGCGTCACAACGGCCAGAAGGACCACAAGTGCGACATCTGCGGACGCGGCTTCGTCCGTCGTGACGCACTGAAGAAACACCTCGAGTGTCTTCACCGGGACGTCAAGTCCTTCCTCTGCAACATCTGCAACAAGACCTTCAAGGGACATCTACCCCAGCACATGCGCACTCACGCACAGGACCGACCTCACGGCTGCGCCACCTGTGGTCAACGCTTCGCCCAAAAGTCCCAGTTAACCGTCCACCAGAGGACGCACTCGGGACAACGGCCCTTCAGGTGTCTGGTCTGCTGGCAGGCCTTCGCCCACTCGACCGCGTTGAAGCTTCACACCAGGAGACACACAGGTGAACGTCCCTTCAAGTGCGCCGAGTGCAACGCCGGCTTCACCCAGTTGCCCCACTGGAAGAAACACATGAAGTGCATCCACGGAAGAAGCGAACCCTACCACTGCCGACGCTGCAACAGCTTCTTCAGGATCAAGAACGAGCTTGAAGCTCACGAGAAGGACTGCCAACCTGACGACAACAGCTCTGATCCTGATGGAAACTCACACGACGGCATGTCGGCTAGTGCTTTGGCCAGGTTCCGTAACATGTCGATCGAGAAGATGAGACTACTTCTGGCTGTTCTACTGAAGCGCATCTCCAAACCGGAGAGACTCGACGAGTTGGGCTTTGGGAAGAGACTCATCGACGAGGTTCTCGTTGACTCGCTGGTATCGGCTGGCAAAGAGGTGGTCAAGGTAAACGGTGTTACCGGGGAATTCGAAGCGCTGAGGAAGAATCTTGAAGTCTTCCTCGAGTGGACGGTACCGAAGGAACACTGGCAGAACTTCCGGAAAATGGAGAAGACCCCGGAGGAAGTGCTCGAGACCCTCACTGCTACGTAA
Protein Sequence: MTNTMEEEEVQLTELRPVEQSWIKETDDKDGNATDGLKALRSFSRRQVDELEHFGAGYPRKRKADRWKHTEFGVHSDVDEEEDVIDKCPKKKKKQLEKKSFNELSDDFDEEDVEFYGVNGDFEYLEDRNDDEIYVYRQRDSCSSPEAETEDGIPSTAENEKLENVIEQQKAKVVEKTKPVPVPRPRGRPRKKRRGVAPKPKEVVLEKEPEQPTSAIDSEKELQSKINDIIQANYLLEQENNNIVESESNSRAQEDSTTSSKENDSEEPEKKYRCDLCKARFKGSGGLRNHYKVVHATGPLFKCDECGKEFPLKERLKLHVRTHTGFKPYKCPECDKSFARGGQLVQHRRTHSQVKPYSCDLCSGTFTCAANLALHVKRHNGQKDHKCDICGRGFVRRDALKKHLECLHRDVKSFLCNICNKTFKGHLPQHMRTHAQDRPHGCATCGQRFAQKSQLTVHQRTHSGQRPFRCLVCWQAFAHSTALKLHTRRHTGERPFKCAECNAGFTQLPHWKKHMKCIHGRSEPYHCRRCNSFFRIKNELEAHEKDCQPDDNSSDPDGNSHDGMSASALARFRNMSIEKMRLLLAVLLKRISKPERLDELGFGKRLIDEVLVDSLVSAGKEVVKVNGVTGEFEALRKNLEVFLEWTVPKEHWQNFRKMEKTPEEVLETLTAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00287501; iTF_00739320; iTF_01274747; iTF_01035677; iTF_01037271; iTF_01036479; iTF_00144063;
90% Identity: iTF_00287501;
80% Identity: -