Cfun000807.1
Basic Information
- Insect
- Cecidostiba fungosa
- Gene Symbol
- ZNF462
- Assembly
- GCA_900474305.1
- Location
- UCOJ01000826.1:48630-51480[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 6.7e-06 0.00056 20.3 5.5 2 23 45 66 45 66 0.97 2 18 0.00014 0.012 16.2 2.7 1 23 72 95 72 95 0.96 3 18 0.23 19 6.0 0.3 1 23 102 125 102 125 0.92 4 18 0.0012 0.1 13.2 1.1 1 23 131 154 131 154 0.97 5 18 0.0007 0.059 13.9 0.4 2 23 160 182 159 182 0.93 6 18 0.00032 0.027 15.0 0.5 1 23 189 211 189 211 0.98 7 18 0.00065 0.055 14.0 10.1 1 23 215 237 215 237 0.96 8 18 0.00054 0.045 14.3 0.1 1 23 243 265 243 265 0.98 9 18 4.2e-06 0.00035 20.9 0.8 1 23 271 294 271 294 0.98 10 18 3.7 3.1e+02 2.2 0.7 1 9 580 588 580 588 0.92 11 18 1.4e-06 0.00012 22.4 3.7 1 23 609 631 609 631 0.99 12 18 1.3 1.1e+02 3.7 7.8 1 23 639 662 639 662 0.95 13 18 0.0082 0.69 10.6 6.7 1 20 668 687 668 690 0.96 14 18 0.00016 0.013 16.0 0.6 1 23 695 717 695 717 0.98 15 18 0.00014 0.011 16.2 0.2 1 23 723 745 723 745 0.97 16 18 0.00016 0.014 16.0 1.5 1 23 749 771 749 771 0.98 17 18 8.5e-05 0.0072 16.8 0.0 1 23 777 799 777 799 0.95 18 18 0.00044 0.037 14.6 0.5 1 23 805 828 805 828 0.98
Sequence Information
- Coding Sequence
- ATGAGCTTTGAACGGATAGAAGATCTTTACCCGCAGTTAATAAACGATATTGACACAGACCTTTTCGACGACCAATTCGAACAGTCTTCCAATTCTTCCTTAGAGCCTATCGAGTACGACCCAAATGGCCCGACCTGCCATCTTTGCGACAAAGTCTTCCGCCGAAACAAGCACCTGCGCCTGCACATGAGTATACACCAGACCACCAAACCTCACCAATGCAAGCTCTGCTCGACAAACTTCAAGACCATCGAGTACCTCAATAGACACATGAATCTCATCCACGGCAACTCCAAGAAGCCGTATCCCTGCGACAAGTGCGATTACCAGGCGAACTCGAAGATCCGACTCCGAGACCACGTGGCCTACAAACACTCTACCGTCTTCAAATTTCCCTGCCATCTATgcgacaaaaaattcaaagtagaCTGGGTTCTGAGGATGCACGTGCGAAAATGGCATCAAAGTGGACCCAGCTCTTGCGACGTTTGCGGCAAGGTCTATCCGAACGAAGGTGCCCTATTCAATCACCACGTCAAGAAGCACAGAAATAGCGACAAGAACTTCCCGTGTAGTATCTGCAAGCAAAGCTTGGCTAGTCAGAAAAGTTTGGATACGCACATGAAGCTTCACGAGACGAAGCACTGCTGCAAGCACTGCGGCAAAATCTGTAAGTCTCAGAATAATTTGAAGAATCATTTAGCAACGCACAACAACGAGAAGAATTATTCCTGCCCAATCTGTGACAGCGAATTCACTCTCAAAGCTGCACAGCAGGTTCACATGCTGACGCATCTCAAAGAGAAACCCTACGTCTGTGATATATGCGGGAAAAAATTCACGCAGAGATCGCCGATGATGCTGCACAGAAGAAAACTTCATCCGGACGTGAATCAACCGCCTCCaccgaaaatcaaaatttcggAACTGTTGGAGAGAGTTCAGCACAAGATAGAGcacaaaataagaaagaataaaagtgtaaGACAAGCAAGAAGGGATCTTGTGAAAGTTATTTCAAACGATCCAAACTTTgcagcgaaaaagaaaaatagtacGGCAGGGACAATCTGCTGGCAAGGACTGAACAACCAGCTTATAATCATCAGTGTGAAAAACGCATTCGATACTCAGCCAGAGGTAGAACAAGCTTCTACGGAACAGCAAGTCGTACTtacacaacaacaacgacgaatCATACTTCCTCAGCAGCAACAACCTCTCATAGTCTTACAACAGCAGGGACAACAGTCTCAACAGccgattattttatttcaacaaCCGCACGAACAGCAGCCATTAATGCTACTACAGCAACCTCTAAAGACCGAATTGCAGCAGGAACAAGATGAACTGGCAGAGAAGAAGCTTGCTTTGCAAGCTCCGCAGCAGGAAGAAATtctgtttgaatttaaaagttcTGAAGATCCAATGTCACAGATTTCAGAGGTTGTTGCCGCTGGTCCTCCTATAAAAAACGTTATAAAGACAATTCGTAATCCCAAGCCTAAAATGAGGAGCTCGTCGAGAATAAAACAATCAATATCAAAGGTATCTATAGCAGTCGTAGACGAGCTAACACTAATCTCGCAAGAAGTTCAAACTGCTCAACCGTCTACTTCTCAAGAACCGTCTGCGCacttggaaaattatttctcagacgacgacgatgacgatgacgacgtGAAAGATTCCAATGTGAGCGAGGAAATCTTCGTGCGCATCGACGACGGTGGCTACCGTTGCAACGTCTGCCAAAAAACTAAACTCGACCGACGCAGCATTCTCAGACACGTCGTCGGTCAGCACTCACAGATACGGCCGTTCAAGTGCAACCAGTGTGACAAGCGCTTCAAGCGCAAGTACACTCTGGGCATCCACCAACGCTCGCACAATCTCAAGCAGTCGGACGGCTTCAAGTGCGAAAAGTGCAACTACCACACGCCGTTGAAGTCCTCGCTACATCTTCATCACTATCGTATGCATACCAACGAGTATCGTTTTACCTGTGAACACTGCGGTAAGCGCTGCAAGTTCAAGCGCGAGCTCGTCGATCACATGGTCTGCCACAGCGACGAGCGCTACATGTGTGATATTTGCGGTAAGCTCTACAAAGGCGTGCATCTTCTCAGAGCGCACAGGAGAATCCACCTCGACCCTTACAAATTTCCCTGCGCTTTGTGCAAGAAAAAGCTTGCCACCGCGGAGAGCTTACAGAACCACATGAAGCTCCACAACAGAACCTTCGAGTGCGACGAGTGCGGCATGAAGTTCTCCTGCAAGCCCAATCTCATCAAGCACAGGAACGTGCATACAAGGGAGCATGCTTTCGCCTGTCCCGAGTGTGGCAAGGTCTTCGCTGATCAGGCGACGCAAAAAGTACACTCGTTGATTCACGCTGGTCTGAGACCGTACAGGTGCAACGTGTGCGGACTGGGATTCACGCAGAGGACACCGATGATGCTGCACTGGAGGAAAAAACATCCTGGTGAGACCGAGACACCACCTCCGGttattttgaagaatataCTGAAGAGCATCGAGGAGCAAAATGGGAAGAAGGCAAGGCTGGAGAACAAGGAGTGA
- Protein Sequence
- MSFERIEDLYPQLINDIDTDLFDDQFEQSSNSSLEPIEYDPNGPTCHLCDKVFRRNKHLRLHMSIHQTTKPHQCKLCSTNFKTIEYLNRHMNLIHGNSKKPYPCDKCDYQANSKIRLRDHVAYKHSTVFKFPCHLCDKKFKVDWVLRMHVRKWHQSGPSSCDVCGKVYPNEGALFNHHVKKHRNSDKNFPCSICKQSLASQKSLDTHMKLHETKHCCKHCGKICKSQNNLKNHLATHNNEKNYSCPICDSEFTLKAAQQVHMLTHLKEKPYVCDICGKKFTQRSPMMLHRRKLHPDVNQPPPPKIKISELLERVQHKIEHKIRKNKSVRQARRDLVKVISNDPNFAAKKKNSTAGTICWQGLNNQLIIISVKNAFDTQPEVEQASTEQQVVLTQQQRRIILPQQQQPLIVLQQQGQQSQQPIILFQQPHEQQPLMLLQQPLKTELQQEQDELAEKKLALQAPQQEEILFEFKSSEDPMSQISEVVAAGPPIKNVIKTIRNPKPKMRSSSRIKQSISKVSIAVVDELTLISQEVQTAQPSTSQEPSAHLENYFSDDDDDDDDVKDSNVSEEIFVRIDDGGYRCNVCQKTKLDRRSILRHVVGQHSQIRPFKCNQCDKRFKRKYTLGIHQRSHNLKQSDGFKCEKCNYHTPLKSSLHLHHYRMHTNEYRFTCEHCGKRCKFKRELVDHMVCHSDERYMCDICGKLYKGVHLLRAHRRIHLDPYKFPCALCKKKLATAESLQNHMKLHNRTFECDECGMKFSCKPNLIKHRNVHTREHAFACPECGKVFADQATQKVHSLIHAGLRPYRCNVCGLGFTQRTPMMLHWRKKHPGETETPPPVILKNILKSIEEQNGKKARLENKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00287480;
- 90% Identity
- -
- 80% Identity
- -