Basic Information

Insect: Catotricha subobsoleta
Gene Symbol: Hr39_2
Assembly: GCA_011634745.1
Location: JAABKK010000767.1:6167430-6171114[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1.4 1.9e+04 -4.7 1.0 134 158 22 46 18 53 0.72

2 5 0.23 3.2e+03 -2.2 0.0 97 130 145 192 83 238 0.54

3 5 1.2 1.7e+04 -4.6 5.6 86 136 243 299 167 342 0.52

4 5 2.5e-08 0.00035 20.7 1.8 1 87 437 522 437 532 0.60

5 5 1.7e-75 2.4e-71 241.9 3.7 159 408 484 751 475 751 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1.4	1.9e+04	-4.7	1.0	134	158	22	46	18	53	0.72
2	5	0.23	3.2e+03	-2.2	0.0	97	130	145	192	83	238	0.54
3	5	1.2	1.7e+04	-4.6	5.6	86	136	243	299	167	342	0.52
4	5	2.5e-08	0.00035	20.7	1.8	1	87	437	522	437	532	0.60
5	5	1.7e-75	2.4e-71	241.9	3.7	159	408	484	751	475	751	0.86

Sequence Information

Coding Sequence: atgtccaCCTCTGGAGGTGGAAGTGGAGGAGGTGGTGGATCCAATACTCCTGGCCGCAGTAATGTGTCCGTAACCAGTATTAATTGTACAAATGTCACTTCATCAAATAGCCCAATgccatcaacatcaacatcatccGTTGTGGGTACAATAGTAGATAGTGGCATCATAAACAGCGATATAAATGGACCGTCCGCATTAAATAATGGAAACCATTTTTATGGAAACGGTAGTATTCGAATATCCGTGCCAAAAATGGAAGAATCTGATGAGTCTGAGACTGAATTATCGCACATTGAAAATGCAGCAATAGTTAATATGAGAGCAAATATTAGTAAAACTGGACCAAGGCCAATGTCATGGGAAGGCGAATTGTCGGAAAATGAAGATCTGATGGAGGCAGAAAACACaacaaattcaacaaaaacagGCGGTAACGAACAATTAAATGTAGTTGCTTATCCGGTTAATAACTTAGTAACAGAAAATTCGATACCAACAAATCAAACAATGCAAAATCAAAGTATGCAATTAATATCGAAAGATGCAATTAAACCTGAATATGGAGGAGAATATCTAATTGCTGTTGATGCAAATTTAAGTCCTTTATTCGCtaacaattcaaataaacgATATCCTGTTGATAttgctaatttaaaatttgaaccaGGTCTGCAGCAGGATACAAATGCAATTAATTCACCATTGCTGGCTCGCTCAAAAACCACACTCCTACCAGCAAATCCAAGTCCTGATTCAGCTATACATTCAGTTTACACACATAGTTCACCCAGTCAATCGCCATTGACATCTCGACATGCACCTTACACACCATCCTTAAGCCGTAATAATAGTGATGCATCGTATAGCAGTTGTTATTCGTATAGTTCCGAATTTAGTCCAACACATTCACCAATTCAAGGTCGTcataatatgtacaataattttaatggttCGCCATTACATCATTCAGTTTTGTATCGACCAATGATCGAtggtgaaaatataaaattacagtCCCAATCACATGAAGATGGTGTACTTGAAACTGAAGCCATTCCGTCAGCTGGAATATCACGACAGCAGCTAATAAATagTCCATGTCCAATATGTGGTGATAAAATATCTGGTTTTCATTATGGAATATTTTCATGTGAATCTTGTAAAGGATTTTTTAAACGTACCGTTCAAAATCGAAAGAATTATGTTTGTTTGCGTGGCGGTCCATGTCCAATAACAATagcaacaagaaaaaaatgtccAGCATgtcgatttgaaaaatgctTACAGCGTGGAATGAAATTGGAAGCCATTCGTGAAGATCGTACTAGAGGTGGACGCTCAACATATCAATGTTCTTATACACTTCCAATGTTGAGTCCGTCACTGGTTGATGGAACtcttttaatatcaaataatagaaCAAAAAGTGTAAATCAACAGGACGCAACTCCAGCAAACACACAAAATCGACAAAGCATTCCCACTTTATTACAAGAAATTATGGATGTTGAACATTTATGGAAGTACAGCGAAGCTGAGTTTTCTCGCATGAATGAAAATACTTCAACAACAACTAGCAGCAGCAGTGGCACTAACAGTGCAGCTAATCTTGCTACAAATCCATTATTGGCTAGTGCTGGTCTCGGTAATGGTGATGATTCTAATCCAGATCTCATCGCTAATTTGTGTAGTGTTGCCGACCATAGActgtataaaattgtaaagtgGTGCAAGAGTTTACcgctttttaaaaatatttcgATTGACGATCAAATTTGCCTACTTATAAATTCATGgtgtgaattattattattctcttgTTGTTTTCGATCGATTTCAACACCCGGTGAAGTTCGAATATCTCTTGggaaatcaattaatttggaACAAGCCAAATCGAGTGGTTTACAgGCATGTATTGAGAGAATGCTTAATTTGACTGATCATTTAAGAAGACTTCGTGTTGATAAGTATGAATATGTCGCAATGAAAGTTATTGTTTTGCTTCAATCGgACACATCCGACTTAAGGGAACCAGAGAAAGTACGAGCATGTCAAGAAAAAGCTTTACAAGCATTACAAACATACACATTGGCACATTATCCAGATTCACCATCAAAATTTGGTGAACTTCTATTACGGATTCCTGAGCTACAAAGAACATGTCaggttGGCAAAGAAAtgttaacaataaaatcaaaagacGGCGCGGAATTTAACTTACTCATGGAATTATTGCGTGGAGAACACTGA
Protein Sequence: MSTSGGGSGGGGGSNTPGRSNVSVTSINCTNVTSSNSPMPSTSTSSVVGTIVDSGIINSDINGPSALNNGNHFYGNGSIRISVPKMEESDESETELSHIENAAIVNMRANISKTGPRPMSWEGELSENEDLMEAENTTNSTKTGGNEQLNVVAYPVNNLVTENSIPTNQTMQNQSMQLISKDAIKPEYGGEYLIAVDANLSPLFANNSNKRYPVDIANLKFEPGLQQDTNAINSPLLARSKTTLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASYSSCYSYSSEFSPTHSPIQGRHNMYNNFNGSPLHHSVLYRPMIDGENIKLQSQSHEDGVLETEAIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGGPCPITIATRKKCPACRFEKCLQRGMKLEAIREDRTRGGRSTYQCSYTLPMLSPSLVDGTLLISNNRTKSVNQQDATPANTQNRQSIPTLLQEIMDVEHLWKYSEAEFSRMNENTSTTTSSSSGTNSAANLATNPLLASAGLGNGDDSNPDLIANLCSVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSISTPGEVRISLGKSINLEQAKSSGLQACIERMLNLTDHLRRLRVDKYEYVAMKVIVLLQSDTSDLREPEKVRACQEKALQALQTYTLAHYPDSPSKFGELLLRIPELQRTCQVGKEMLTIKSKDGAEFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00285545; iTF_00285469;
90% Identity: iTF_00285545; iTF_00285469;
80% Identity: iTF_00285545; iTF_00285469;