Basic Information

Insect: Catonia carolina
Gene Symbol: -
Assembly: GCA_035578175.1
Location: JAQMRL010000015.1:13241543-13253822[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.047 88 5.0 0.4 19 38 2 22 1 22 0.84

2 29 1.5 2.9e+03 0.2 0.1 18 35 29 48 26 50 0.84

3 29 0.003 5.6 8.8 0.3 13 38 52 78 45 78 0.83

4 29 0.78 1.5e+03 1.1 0.2 18 38 85 106 83 106 0.75

5 29 0.17 3.2e+02 3.2 4.6 15 38 110 134 101 134 0.83

6 29 0.15 2.8e+02 3.4 0.5 18 34 141 159 138 164 0.75

7 29 2.7 5.1e+03 -0.6 5.2 15 38 166 190 157 197 0.78

8 29 0.026 50 5.8 1.0 18 38 270 287 267 292 0.84

9 29 0.31 5.8e+02 2.4 0.4 18 38 298 315 288 319 0.78

10 29 0.0015 2.7 9.8 0.8 5 38 314 347 310 348 0.83

11 29 0.06 1.1e+02 4.7 1.0 13 34 349 372 342 375 0.76

12 29 0.019 35 6.3 0.5 14 38 378 403 370 403 0.77

13 29 0.17 3.2e+02 3.2 1.1 18 38 410 431 406 435 0.93

14 29 0.78 1.5e+03 1.1 0.1 18 34 438 456 432 459 0.75

15 29 0.034 64 5.5 0.5 15 35 463 485 454 487 0.79

16 29 0.0035 6.7 8.6 0.2 14 38 490 515 486 515 0.82

17 29 0.057 1.1e+02 4.7 0.2 18 35 522 541 518 543 0.86

18 29 0.028 53 5.7 0.3 13 39 545 568 539 572 0.72

19 29 0.11 2e+02 3.8 2.1 18 38 578 599 566 599 0.90

20 29 0.033 63 5.5 1.0 18 35 606 625 602 627 0.85

21 29 0.005 9.3 8.1 0.3 13 36 629 654 622 655 0.80

22 29 0.04 76 5.2 0.4 18 35 662 681 658 683 0.81

23 29 0.04 76 5.2 0.1 18 39 690 708 682 712 0.81

24 29 0.19 3.5e+02 3.1 0.1 18 38 718 739 714 743 0.77

25 29 0.33 6.1e+02 2.3 0.6 17 30 745 760 737 767 0.73

26 29 0.0099 19 7.2 0.4 13 39 769 792 762 796 0.76

27 29 0.033 62 5.5 0.8 18 35 802 821 797 823 0.81

28 29 0.0082 15 7.4 0.2 13 38 825 851 819 851 0.83

29 29 0.14 2.6e+02 3.5 0.1 18 34 858 876 854 879 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.047	88	5.0	0.4	19	38	2	22	1	22	0.84
2	29	1.5	2.9e+03	0.2	0.1	18	35	29	48	26	50	0.84
3	29	0.003	5.6	8.8	0.3	13	38	52	78	45	78	0.83
4	29	0.78	1.5e+03	1.1	0.2	18	38	85	106	83	106	0.75
5	29	0.17	3.2e+02	3.2	4.6	15	38	110	134	101	134	0.83
6	29	0.15	2.8e+02	3.4	0.5	18	34	141	159	138	164	0.75
7	29	2.7	5.1e+03	-0.6	5.2	15	38	166	190	157	197	0.78
8	29	0.026	50	5.8	1.0	18	38	270	287	267	292	0.84
9	29	0.31	5.8e+02	2.4	0.4	18	38	298	315	288	319	0.78
10	29	0.0015	2.7	9.8	0.8	5	38	314	347	310	348	0.83
11	29	0.06	1.1e+02	4.7	1.0	13	34	349	372	342	375	0.76
12	29	0.019	35	6.3	0.5	14	38	378	403	370	403	0.77
13	29	0.17	3.2e+02	3.2	1.1	18	38	410	431	406	435	0.93
14	29	0.78	1.5e+03	1.1	0.1	18	34	438	456	432	459	0.75
15	29	0.034	64	5.5	0.5	15	35	463	485	454	487	0.79
16	29	0.0035	6.7	8.6	0.2	14	38	490	515	486	515	0.82
17	29	0.057	1.1e+02	4.7	0.2	18	35	522	541	518	543	0.86
18	29	0.028	53	5.7	0.3	13	39	545	568	539	572	0.72
19	29	0.11	2e+02	3.8	2.1	18	38	578	599	566	599	0.90
20	29	0.033	63	5.5	1.0	18	35	606	625	602	627	0.85
21	29	0.005	9.3	8.1	0.3	13	36	629	654	622	655	0.80
22	29	0.04	76	5.2	0.4	18	35	662	681	658	683	0.81
23	29	0.04	76	5.2	0.1	18	39	690	708	682	712	0.81
24	29	0.19	3.5e+02	3.1	0.1	18	38	718	739	714	743	0.77
25	29	0.33	6.1e+02	2.3	0.6	17	30	745	760	737	767	0.73
26	29	0.0099	19	7.2	0.4	13	39	769	792	762	796	0.76
27	29	0.033	62	5.5	0.8	18	35	802	821	797	823	0.81
28	29	0.0082	15	7.4	0.2	13	38	825	851	819	851	0.83
29	29	0.14	2.6e+02	3.5	0.1	18	34	858	876	854	879	0.76

Sequence Information

Coding Sequence: ATGTGCGATTTATGCGGGAAAGAATTTACGCAAAAAGCGACGCTGAGTAGtcacatgttatcacatagtggcgCTAAGCCGTTTAAATGCGAATTGTGCCAATATGAATTCACGCAGAAAGTTTCGCTAAATACTCATATGTTATTGCATGCCGATTCGAAGCCGTTCAAGTGCGATTTATGCGGGAAAGAATTTACGCAAAAAGCATCGCTGAGTAGtcacatgttatcacatagtggcgCTGAACCGTTTAAATGTGATTTGTGTCCGAACGAATACACACAGAAATCTTATCTAGTTACCCACATGTTGTCACATAGTGACGCTAAGCCGTTTAAATGTGATTTGTGTCATCACGAATTCAAACAGAAATCTCATCTAACCACGCACATGTTTTCACATAGTGGTGTTAAACCGTTCAAATGCAATTTGTGTCGTTCCGAATTCAGACGGAAAACTGATCTTGCCACCCACATGTTGTCACATAGTGACGCTAAACCGTTTAAATGTGATTTGTGTTGTAACGAATTCAGACGGAAATCTCATCTAACCACGCACATGTTGTTACATAGAGCGCTAAACCATTTAAATGCAATTTGTGTCGATAACGCAAGCGGTTCTGAAGAGGTGAAATGGGAAGTCGAAAAATCTAGTGGAGAACTGGTGTCGATTAATATAGACTATAGTTATTCTAGCGGTGATATAGACAGTGATTGTGGTGCAACACGTGTCACCATAAGTAGTGATTCTGAATTAAATAGCGCAACGTATCGTAAGACATCATCGCGTGGTGGTATTACGCCATTTAAATGTAACGTCTGTAATAAAGAGTTCACTCAGAGAGGTAATTTGAAACGTCACCGGTTAACACATACCGGTGCTAAACCGTTTAAATGCGAATTGTGCCAAAAGGAATTCAGGCAGAAAGATACGCTAAAGACTCATATGTTATTGCATACCGATTCGAAGCCGTTCAAGTGCGATTTATGCGGAAAAGAATTTACGAAAAAAGCGTCGCTCAGTAGCCACATGTTGTCACATAGTGACGCTAAACCGTTTAAATGCGAATTGTGCCAAAAGGAATTCACGCAGAAATATTCGCTGAATACTCATATGTTTTTGCATGGCGATTCGAAGCCGTTCAAGTGCGATTTATGCGGGAAAGAATTTATGCAAAAATCGTCGCTGAGTAGccacatgttatcacatagtggcgCTAAGCCATTTAAATGTGATTTGTGTCCGAACAAATACAGACAGAAATCTCATCTAACCAAgcacatgttatcacatagtgaGGCTAAACCGTTTAAATGTGATTTGTGTCCGAACGAATACACACAGAAATCTTATCTAGCCACCCACATGTTGTCACATAGTGATGCTAAACCGTTTAAATGCGAATTGTGCCAAAAGGAATTCACGCAGAAATATTCGCTGAACACTCATATGTTATTGCATGCCGATTCGAAGCCATTCAAGTGCGATTTATGCGGGAAAGAATTTACGCAAAAAGGGTCGCTGAGTAGtcacatgttatcacatagtggcgCTAAGCCGTTTAAATGCGAATTGTGCCAAAAGGAATTCACGCAGAAATATTCGCTGAACACTCATATGTTATTGCATGCCGATTCGAAGCCATTCAAGTGCGATTTATGCGGGAAAGAATTTACGCTAAAAGCATCGCTTAGTCGtcacatgttatcacatagtggcgCTAAACCGTTTAAATGTGATTTGTGTCCGAACGAATACACACAGAAATCTCATCTAACCAAgcacatgttatcacatagtggcgCTAAACCGTTTAAATGCAATGTTTGCCGAAAGGAATTCAAGCATAAATATTCGCTGAACACTCATATGTTATTGCATGCCGATTCGAAGCCATTCAAGTGCGATTTATGCGGAAAAGAATTTACGCAAAAAGGGTCGCTGAGTAGTCACACGTTATCACATAGTGGCGCTAAGCCGTTTAAATGCGAATTGTGCCGAAAAGAATTCACGCAGAAAAGTTCGCTGAACACTCATATGTTATTGCATGCCGATTCGGAGCCTTTCATGTGCGATTTATGCGGGAAAGAATTTACGCAAAAAGCAACGCTGAGTAGgcacatgttatcacatagtggcgCTAAGCCGTTTAAATGTGATTTGTGTCCGAACGAATTCACACGAAAATCTTATCTAGCCACCCACATGTTGTCACATATTGACGCTAAACCGTTTAAATGCGAATTGTGCCAAAAGGAATTCATGCAGAAACATTCGCTGAACTCTCATATGTTATTGCATACCAATTCCAAGCCGTTCGAGTGCGATTTATGCGGGAAAGAATTTACGCAAAAAGCAACGCTGAGTAGgcacatgttatcacatagtggcgCTAAGCTGTTTAAATGCGAATTGTGCCGAAAGAAATTCACGCAGAAAAGTTCGCTGAACACTCATATGTTATTGCATGCCGATTCGAAGCCGTTCAAGTGCGATTTATGCGGGAAAGATTTTACGCAAAAAGCATCGCTGAGTAGtcacatgttatcacatagtggcgCTAAGCCGTTTAAATGTGATTTGTGTCCGAACGAATACACACGGAAATCTTATCTAGCCACCCACATGTTGTCACATAGTGACGCTAAACTGTTTTAA
Protein Sequence: MCDLCGKEFTQKATLSSHMLSHSGAKPFKCELCQYEFTQKVSLNTHMLLHADSKPFKCDLCGKEFTQKASLSSHMLSHSGAEPFKCDLCPNEYTQKSYLVTHMLSHSDAKPFKCDLCHHEFKQKSHLTTHMFSHSGVKPFKCNLCRSEFRRKTDLATHMLSHSDAKPFKCDLCCNEFRRKSHLTTHMLLHRALNHLNAICVDNASGSEEVKWEVEKSSGELVSINIDYSYSSGDIDSDCGATRVTISSDSELNSATYRKTSSRGGITPFKCNVCNKEFTQRGNLKRHRLTHTGAKPFKCELCQKEFRQKDTLKTHMLLHTDSKPFKCDLCGKEFTKKASLSSHMLSHSDAKPFKCELCQKEFTQKYSLNTHMFLHGDSKPFKCDLCGKEFMQKSSLSSHMLSHSGAKPFKCDLCPNKYRQKSHLTKHMLSHSEAKPFKCDLCPNEYTQKSYLATHMLSHSDAKPFKCELCQKEFTQKYSLNTHMLLHADSKPFKCDLCGKEFTQKGSLSSHMLSHSGAKPFKCELCQKEFTQKYSLNTHMLLHADSKPFKCDLCGKEFTLKASLSRHMLSHSGAKPFKCDLCPNEYTQKSHLTKHMLSHSGAKPFKCNVCRKEFKHKYSLNTHMLLHADSKPFKCDLCGKEFTQKGSLSSHTLSHSGAKPFKCELCRKEFTQKSSLNTHMLLHADSEPFMCDLCGKEFTQKATLSRHMLSHSGAKPFKCDLCPNEFTRKSYLATHMLSHIDAKPFKCELCQKEFMQKHSLNSHMLLHTNSKPFECDLCGKEFTQKATLSRHMLSHSGAKLFKCELCRKKFTQKSSLNTHMLLHADSKPFKCDLCGKDFTQKASLSSHMLSHSGAKPFKCDLCPNEYTRKSYLATHMLSHSDAKLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00283786;
90% Identity: iTF_00283786;
80% Identity: iTF_00283786;