Basic Information

Insect: Catonia carolina
Gene Symbol: -
Assembly: GCA_035578175.1
Location: JAQMRL010000015.1:14468713-14478821[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.11 2.1e+02 3.8 1.8 18 39 161 179 157 193 0.90

2 15 0.014 27 6.7 0.0 18 44 217 240 212 240 0.91

3 15 0.0011 2.1 10.2 0.1 18 39 246 264 243 271 0.92

4 15 0.0019 3.6 9.5 0.4 18 39 274 292 267 296 0.90

5 15 0.0034 6.4 8.7 0.8 18 39 302 320 293 327 0.89

6 15 0.4 7.5e+02 2.0 0.4 18 39 330 348 323 352 0.84

7 15 2 3.7e+03 -0.2 0.6 18 39 358 376 343 380 0.80

8 15 0.023 44 6.0 1.8 17 43 385 408 372 409 0.81

9 15 0.067 1.3e+02 4.5 0.1 18 38 415 432 413 436 0.93

10 15 0.14 2.6e+02 3.5 0.3 17 44 470 494 456 494 0.85

11 15 0.03 56 5.6 0.6 18 38 500 517 498 521 0.93

12 15 0.072 1.4e+02 4.4 2.9 5 30 516 542 512 553 0.72

13 15 0.012 22 7.0 0.9 18 39 556 574 545 581 0.88

14 15 0.0027 5.1 9.0 0.5 18 43 584 606 576 607 0.87

15 15 0.052 97 4.9 4.3 3 40 598 632 596 663 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.11	2.1e+02	3.8	1.8	18	39	161	179	157	193	0.90
2	15	0.014	27	6.7	0.0	18	44	217	240	212	240	0.91
3	15	0.0011	2.1	10.2	0.1	18	39	246	264	243	271	0.92
4	15	0.0019	3.6	9.5	0.4	18	39	274	292	267	296	0.90
5	15	0.0034	6.4	8.7	0.8	18	39	302	320	293	327	0.89
6	15	0.4	7.5e+02	2.0	0.4	18	39	330	348	323	352	0.84
7	15	2	3.7e+03	-0.2	0.6	18	39	358	376	343	380	0.80
8	15	0.023	44	6.0	1.8	17	43	385	408	372	409	0.81
9	15	0.067	1.3e+02	4.5	0.1	18	38	415	432	413	436	0.93
10	15	0.14	2.6e+02	3.5	0.3	17	44	470	494	456	494	0.85
11	15	0.03	56	5.6	0.6	18	38	500	517	498	521	0.93
12	15	0.072	1.4e+02	4.4	2.9	5	30	516	542	512	553	0.72
13	15	0.012	22	7.0	0.9	18	39	556	574	545	581	0.88
14	15	0.0027	5.1	9.0	0.5	18	43	584	606	576	607	0.87
15	15	0.052	97	4.9	4.3	3	40	598	632	596	663	0.88

Sequence Information

Coding Sequence: ATGGAGGTTGATACATGTGAATTTAAGATAAAAACTGAAGTTGAGCATACAGAGATTGATATCAAAGTTGATGATGCAGACTCAAACATTGAGGCGAATCCTGAGCTAGATCCAGTCACTCCTGGTTTTGAATTTGTTGCCGTGAAAAAGGAAATTatagatgatgaagaagaagaagaagaagaggaggatgaaCTTGACAACTGGCCGTCCAATCCACTCGGCAGTGACCGAATCAAAACTGAGGAGGATGCAGATAATTCAGTAGATGTCGATGATGAATCTGTCCAGGTCAAGAAAGAAGATATTTCAGAGTCGATTGTGGATGCCAATTGGTCTGATCTATCCGAGAAAGATAATGAATACGGTGATGATGGTACCGAGACATTTACAAGTGCGAGTAATGTCTGCCGAAAGGAATTTATGCAGGAGAGTTCTTCAGATTTGAATCAGTCGTTAGGTGATGGTACTAAAccatttaagtgtgatttgtgtgAAAGTAAATTCAAAgacaaaagaaatttaaagagACATATGTTAGTTCATAGCGATGTGAAACCGTTCCGATGTGAAGTTTGCCAGAGGGGTTTCAAAACGAAATACGAATTGAAACCTCATATGCTGTTGCACAATGGTTCTGATCCATTTAAGTGCGACGTTTGCCGAAAGGAATTTCTCATCGAAAGCAGGTTGAAGAGGCACATGGTAATAGTTCATAGTGATGCGCGACCCTTTAAATGTGACATTTGCCAAAAGGAATTCAAAGGCAAAAGCAATTTGGTCCAGCACATGTCCGGTCATAGCGATGCGAGACCGTTCAAATGTGAAATTTGCGAAAAGGATTTCAAAGATAAAAGCAATTTGAAGAAGCACATGTTAGTTCATAACGATGCAAGACCCTTCAAATGTAATTTGTGCGAAAAGGAATTCAAAGATCGAAGCAATTTGAATTCGCACATGTTGGTGCATAGCGACGCGAGACCTTTCAAATGCGATATCTGCCAAAAGGAGTCGAAAAGCAGGAGTGATTTTAAGAAGCACATGGTAGTTCATAGTGATGCAAGACCCTTCGAGTGTGACGTATGCCAGAAGGGTTTTAAAGACAAGCGTAGTTTGAAACACCACATGGTAGTTCACGACGATGTGAATCCCTTCAAATGTAATTTGTGCCAAAAGGAATTCAACGGCAGAAGTGATTTTAATAAGCATATGGAAATAGTTCATAATGAAGTGCGACCGTTCAAATGTGATGTTTGCCAGAAGGAAttcaaagataaaaaaaatttcaagagaCATACGTTGGTGCATAGTGATGTGAGACCATTCCAATGTGAAGTTTGCCAGAAGGGTTTCATCACGAAATACGAATTGAAAACTCACATGTTGCATCACGGCGATTCTGATCCGTTCAAGTGTGATGTATGCCAAAAGGAATTCCTCCTGGAAAGCAGATTGAAGAGTCACATGGTGGTAGTTCACAGCGATGTGAGACCGTTCAAATGTGACATCTGTCAGAAGCGATTCAAAGGGCGTAGCAATTTTATGAAGCACACGTTAGTTCATAGTGATTTAAAACCGTTCAAATGCGATTTGTGCGGAAAGGAATTCAAAGGCAAATGCAATTTGAATATGCACATGTTAGTTCATAGCGATACGAGACCGTACAAATGTAGTTTGTGCGAAAAGGAATTCAAAGGTAGAAGCAATTTGAACGCGCACATGTTAGTTCATAGCGATGCAAGGCCCTTCAAATGTAATTTGTGCGAAAAGGAATTCAAAGGCAGAAGCGATTTTAAGAAGCACATGGCGATAGTTCACACCGAAGCGAGACCCTTCAAATGCGATGTATGTGAGAAGGAATTCAAAGATAAGCGTTGTTTGAAGTACCACATGGTCGTACATAGCGACGCGAGACCCTTCAAGTGCGATGTTTGTCCGAAGGGATTCGCAGACAAAAGCAATTACAGGAGACACATGTTACGTCATAGTAAAGTGATTAGTGCCGAGACAAATTTAGAAGAAAATGTAACTTGA
Protein Sequence: MEVDTCEFKIKTEVEHTEIDIKVDDADSNIEANPELDPVTPGFEFVAVKKEIIDDEEEEEEEEDELDNWPSNPLGSDRIKTEEDADNSVDVDDESVQVKKEDISESIVDANWSDLSEKDNEYGDDGTETFTSASNVCRKEFMQESSSDLNQSLGDGTKPFKCDLCESKFKDKRNLKRHMLVHSDVKPFRCEVCQRGFKTKYELKPHMLLHNGSDPFKCDVCRKEFLIESRLKRHMVIVHSDARPFKCDICQKEFKGKSNLVQHMSGHSDARPFKCEICEKDFKDKSNLKKHMLVHNDARPFKCNLCEKEFKDRSNLNSHMLVHSDARPFKCDICQKESKSRSDFKKHMVVHSDARPFECDVCQKGFKDKRSLKHHMVVHDDVNPFKCNLCQKEFNGRSDFNKHMEIVHNEVRPFKCDVCQKEFKDKKNFKRHTLVHSDVRPFQCEVCQKGFITKYELKTHMLHHGDSDPFKCDVCQKEFLLESRLKSHMVVVHSDVRPFKCDICQKRFKGRSNFMKHTLVHSDLKPFKCDLCGKEFKGKCNLNMHMLVHSDTRPYKCSLCEKEFKGRSNLNAHMLVHSDARPFKCNLCEKEFKGRSDFKKHMAIVHTEARPFKCDVCEKEFKDKRCLKYHMVVHSDARPFKCDVCPKGFADKSNYRRHMLRHSKVISAETNLEENVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00283795; iTF_00283792;
90% Identity: iTF_00283795;
80% Identity: iTF_00283795;