Ccar049119.1
Basic Information
- Insect
- Catonia carolina
- Gene Symbol
- dmd-4_1
- Assembly
- GCA_035578175.1
- Location
- JAQMRL010000012.1:1454849-1471232[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-26 1.2e-21 78.1 11.6 1 47 15 61 15 61 0.99 2 2 0.078 1.3e+03 1.2 1.7 28 36 360 368 359 371 0.84
Sequence Information
- Coding Sequence
- ATGAAACATAAAGAATCGAACAACGAACCTTCAAGATCagGTCGACGTCCAAAATGTGCGAGATGCAGAAACCATGGAATGATCTCCTGGTTAAAAGGACATAAAAGACAGTGCCGATTTAAAAGCTGTTTTTGTCCGAAATGTAATTTAATTGCTGAAAGACAACGTGTCATGGCTGCACAGgtagcACTGAAACGGCAGCAAGCAGCTGAAGATTGTATTGCCCTTGGTTTAACAAAAGTAATGACTGGAAAAAATTTGTTCTACTTACCTCCTGGGCCAATTTTTAACAACATGGTCTTACctgaacaaacTGAAACAAGTGAAGAACAACCATCATCGTCAAAATCACCAGAAAGTTCATCAGATGATGTTGAATCTCCAGCGCCAGCTGATTCCTCAGTTATTGATTCACAAATAATTTCTGTTGACAAAGAAGAAAAGACAACCGATCTTGATGAACCAACTGCCAGTTCTATTTCATCAACTAACCTTTCACCATCTTCTTTACAACTTCTCGTTAAATTATTCCCCGACAAGAAAAGATCCGTTTTAGAATTGGTGTTAAAACGAAGCGGTGATGATTTATTGAAGGCGATTGAGCAATGTGTTTCTCAAAGTGGTATGAAAAAGGCCCTCGCGTCTGGCTGTATTTCCACAAATCATAATCTTAGTGTTAATAACAACAGTAGCAGTAATCTTAGTAACAGTAATCCGACACAACGAAGTAATCAAGTCAACATCTGGAATGATTTAACTCACACAAATGTAACACATGACCGTGATAGGAGTAAAGAACAAGAATTAATAAATGCTGATATGAGGTTATCGGCATTCAGGCCGTTTCTTAGCACAGCTAGTTCCAATATAAATATTAGAAATGCTAACATTATATCTTCAGACCAACTTGAACCTCCGCAAGCTCATCAAGTTTTGCCATGCAGCGGTCGATTACTGAACATGTTTGCGCCTCGTTCGACAACGTTTTTCCATGCACAAACCCCCTCATTCAGtgGAACTTCGTTACTACCGTTGTACCAGACTATTCCTCTTTTGCATCAACAACCATTGGGTCCCAGTTGCAGCTGTCCAGAGTGTACTTCAAATACAAATTAA
- Protein Sequence
- MKHKESNNEPSRSGRRPKCARCRNHGMISWLKGHKRQCRFKSCFCPKCNLIAERQRVMAAQVALKRQQAAEDCIALGLTKVMTGKNLFYLPPGPIFNNMVLPEQTETSEEQPSSSKSPESSSDDVESPAPADSSVIDSQIISVDKEEKTTDLDEPTASSISSTNLSPSSLQLLVKLFPDKKRSVLELVLKRSGDDLLKAIEQCVSQSGMKKALASGCISTNHNLSVNNNSSSNLSNSNPTQRSNQVNIWNDLTHTNVTHDRDRSKEQELINADMRLSAFRPFLSTASSNINIRNANIISSDQLEPPQAHQVLPCSGRLLNMFAPRSTTFFHAQTPSFSGTSLLPLYQTIPLLHQQPLGPSCSCPECTSNTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -