Ccar027220.1
Basic Information
- Insect
- Catonia carolina
- Gene Symbol
- kn
- Assembly
- GCA_035578175.1
- Location
- JAQMRL010000003.1:36156812-36172105[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-102 8.5e-98 329.9 19.8 248 525 14 283 6 301 0.83
Sequence Information
- Coding Sequence
- ATGAGACGGTGGTACTGTGCAGGGTTGTATCCTCCCTTACCAGTTGCGACCCCTTGTATTAAGGCGATCAGCCCGAGCGAAGGATGGACCAGCGGGGGATCTACCGTAATTATCATCGGAGACAACTTCTTCGATGGTCTTCAAGTAGTCTTCGGAACTATGCTTGTCTGGAGTGAGTTAATCACATCACATGCTATACGAGTTCAAACACCGCCCAGACATATACCTGGTGTTGTGGAAGTGACTTTATCTTATAAATCTAAACAATTTTGTAAGGGTGCGCCTGGACGTTTTGTTTATGTTTcgTTAAACGAACCTACAATAGACTACGGATTCCAGAGGCTTCAAAAGCTTATACCTAGGCATCCGGGAGATCCAGAAAAACTCCCAAAAgAAATAATTCTTAAGCGAGCAGCAGATTTGGCTGAAGCATTGTACAGTATGCCTCGTAACAATCAATTATCCCTTGGAGCACCCCGCTCACCACCAGCAATACCTAACAATGGTATGTCGTCTGGTTTCAACACGTATACGGGACAATTAGCTGTTAGCGTGCAAGAGAACGGAAATGGCCAATGGACTGAAGAAGAATACGGACGTGGCCAGAGTTCTAGCGTTTCTCCCAGAGGTGGATATGGTTCTTCATCTTCGACGCCACATTCATCAAACGGGGGATCTTACAATACAGCAGCTTCAATGAACGGTAGTTACACTGGAACTGCTCCAGCCCCTGCCCCTGCCCCTGTACCTCCAACATCATCGACCCAGTTAACGAATATGGGCTCACCGGCTGGAGGATTGTTTAATTCTTCTCCAAGAGTGGGAAGCCTCGTATCCTCCCCGTTCGCAACAATGAACCCTTTCGCCTTGCCTACTTGTAATTCACAATCTTATGGGACTTCACCTTTAGTTGGTACATCCAAATAA
- Protein Sequence
- MRRWYCAGLYPPLPVATPCIKAISPSEGWTSGGSTVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLSLGAPRSPPAIPNNGMSSGFNTYTGQLAVSVQENGNGQWTEEEYGRGQSSSVSPRGGYGSSSSTPHSSNGGSYNTAASMNGSYTGTAPAPAPAPVPPTSSTQLTNMGSPAGGLFNSSPRVGSLVSSPFATMNPFALPTCNSQSYGTSPLVGTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01353512; iTF_00857386; iTF_00139022; iTF_00678288; iTF_00051540; iTF_00644823; iTF_01059546;
- 90% Identity
- -
- 80% Identity
- -