Aaln035218.1
Basic Information
- Insect
- Aphrophora alni
- Gene Symbol
- kn
- Assembly
- GCA_963513935.1
- Location
- OY740768.1:99980618-99996987[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-104 9.3e-100 337.0 17.6 248 560 17 312 8 318 0.82
Sequence Information
- Coding Sequence
- ATGCTTGTTGTGGGCGGAGTGGGGAGGGGAGGGTTGTATCCTCCTCTTCCAGTTGCTACCCCTTGCATAAAAGCTATCAGTCCGAGTGAAGGATGGACGAGTGGAGGTTCAACGGTCATCATCATTGGAGATAACTTCTTCGATGGTCTCCAAGTTGTCTTTGGAACAATGCTCGTCTGGAGTGAGTTAATAACATCGCACGCAATAAGAGTACAGACACCTCCGAGACATATACCTGGAGTTGTGGAGGTTACCTTGTCTTACAAGTCCAAACAGTTTTGTAAAGGAGCACCTGGTCGCTTCGTGTATGTTTCATTAAACGAACCCACGATAGATTATGGTTTCCAAAGGTTACAAAAACTTATACCAAGGCATCCAGGAGATCCGGAAAAGTTACCCAAGGAAATAATTCTGAAGCGAGCAGCAGATCTGGCTGAAGCGTTATACAGTATGCCTAGGAATAATCAACTCTCATCTCTCTCAGCACCAAGGTCTCCCTCCAGTATGTCAAACAATATGACTTCGTCAGGTTTCAACACTTACACAGGACAACTGGCTGTCAGCGTACAGGAGAATGGTAGCGGCCAGTGGACTGAAGatgAGTACGGACGAGCACAAAGCAGTAGTGTATCTCCAAGAGGTGGAGGTTATGGTTCAAGTGCATCCACACCTCACTCCTCCAATGGAGGTTCTTACAATACAGCAGCTCCTGGCCCTACTAGCATGAACGGAGGAAGCTACAACAGCGCCACACCGGGCTCCGCATCAACTACTCAGCTCACAAACATGGGCTCACCTGCAGGAGGTCTTTTTAACTCCTCCTCTATTGTTCCTTCCGACCATTATCCGTCGTATTCGCAGTATGGGGGCTCCACCAGCTCAGAGTGTAAAGAGAAAAGCGCGTTCCTCCCAGTGCCTCGGGGGCCACTCCCCCCTACCACAGGGTGGAATCATTTAGCCGTTCAGGGCTAA
- Protein Sequence
- MLVVGGVGRGGLYPPLPVATPCIKAISPSEGWTSGGSTVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLSSLSAPRSPSSMSNNMTSSGFNTYTGQLAVSVQENGSGQWTEDEYGRAQSSSVSPRGGGYGSSASTPHSSNGGSYNTAAPGPTSMNGGSYNSATPGSASTTQLTNMGSPAGGLFNSSSIVPSDHYPSYSQYGGSTSSECKEKSAFLPVPRGPLPPTTGWNHLAVQG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00283114;
- 90% Identity
- -
- 80% Identity
- -