Ccar017525.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Catonia carolina
Gene Symbol
Rel_1
Assembly
GCA_035578175.1
Location
JAQMRL010000001.1:346515403-346586691[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-36 3.7e-32 113.4 0.3 1 168 349 537 349 538 0.87
2 2 0.82 1.3e+04 -2.3 0.0 94 120 604 630 594 652 0.72

Sequence Information

Coding Sequence
ATGTTTGATAACGGCAATGATGAATGGGAAGTAAGACAAGATATATTTGAGGAAGAAATTTTACCATTCAAAAGCGATTTTGGTTTTGATGATATTTTCCAGGACGAACCGAGAGGCATGTTTGATGATATCTTAAGTATAGTTTCAAGAATGTTGCCACATTCATTTTTTGATAcagtttatattaaattacaatctACTGAAAAACcgaaaacaattataaaatctGGTATCGAACAATTCCCTAATGAACACTTGAACTACTTCATTGAGAATTTGCGAAATAAGAGACAAGCTGGCTTATCTAgcatcactcctcattttaacTCTCAGTTAACAACCACATCTGGTTTAAGCAAGGAAGGTAGCATAAATACAAACCACAATAATGATATTGATTCTTTAATTAGTACCATAATTACATTAGCGAATGATAATGCCAGTGCAACAGATGAAAGTTTAATAAGTACTGCAAAAGCGATGTTAAATAATACTAATGAAGAAATGACTCATCTCactgtaaatataaatacagGAGATAAGCAGCATTCAACTGATGCAAATACACTTAATATGAAATTATCATCAGATCCATTATCTGCTGAAGTTACAAATACAGTATCCAAGCTGAAGCACTCAACATCTTCTGTAAAGGAAAGTACATATAACCAGGAAGCTGATAATAAGCTAAGCATAAGTTTATTCGATACAGCCGATAGTGAGCCTGGTGAAATGGACTTGAATTCTGGAACTAAGAACGTCAATCCAAATCACGTAGATATGCGAGATGAACGCATTCATGAAGCTGCTCTCCCGAACGAGGAAGGTGATAGTGATACATCAAAAAGAGACACTAATGTATTTTTTATCATATTGGGTGTAATTCCAGGCATAGTGGGAGGCAGCATCTCAAGTCCTCCTACACCTTATAGTACTGATGTATCAAACTCCAGTACTGGTTCCATTTTTAATCCATCACCAACAATGTACACATTCCAACGTTCACCAGATCCCATAGCGTATAATAAGCCTGGCCGTCCATGTCTAGAATTAGTAGAACAAACAGCTCCAATGTTCAGGTTTCGTTATGTAACAGAGATGCAAGGAACTCATGGTGCAATAAGAGGTATAAATAGTGGAAAAAATGAGAAGACATTTCCTACCGTTAAAcTCTGCAACTACAATGCTCCAGCTGTTATACGTTGTACATTATATACTGTTGATAAAAAAAGTTTGCACGTCCACAGATTGGTTGGAAAGTGTTCTGGTGAAAAGAAAGACGACCCTCATGATATTCAAGTTGGACCAAACCGACATAATGGGTTTATAGCTAGTTTCCAGAATCTAGTGATTATTCATACAGCTAAGAAACAACTAGTTAACGAGCTAATTGAGAAAAAAAAGCGGGTTATAAAAGCAAATTATCCAAATTCTGTTGGATTCGATATTGCTCCTGAAACTTTGAAAAAGatgcaaaaagaagcacaagaagaAACAAAAAAGATGGATCCAAATTGTGCATGTTTAAGATTTGAAgcacttattttacaaaatggcCATTATGTACCATTACCAGATTGCAAACCAATTTATTCTAATGGAATAAAGAATATGAaaaatcatgtGACTGGCCAGCTGAAAATATGTAGAATAGACAGGGTTTCAGGATCTTGCGAAGGTGGTGATGAGATATTTCTTTTTGTCGAGAAAGTTGGCAAAGATAATGTAAAAGTAATTATGACAGAATGTGATGAATTTGGTGAAGAAGTTTGGCATGATTATTGTACCTTTTCACCTTCTGATGTACACCACCAATTTGGCATTGTATGCAAAACTCCAAAGTACAGAAGTTCTGATATCAAACAAAAAGTCACTGTGAAATTACAATTGGAACGAAAAACTGATTGTGCAAGAAGTGAACCTGTTGAGTTCACATATAAACCCAGAGACCATCATGTCCAGTTTACAGAGAGCTGTAAGAGGAAGCGTCTTGCTTCTGAGATATCATCTGTTGACTTGCCTCATGTTTCACCGCCACAGAATTTGGAAGTAACTTCTACAACCGGTTTAGAGACATCTGATCATGTTTTGCGTCATAAAATTCCATTTGGTAATCTCAGTGTTTTTGATTATGATGATAACATGGAACAAGATCCCATGTGGTCAAAAGATTATGTTGCATTGGCAGATGATTCTgaacTTTTTGCTCCATTTGAAAAAAGCACTTCCTTCACAGAAATTGTTGAACAGTTACCTACACCAGACTATGACCAAATAAAAACTGTTTGTAATTCAGATCCAGcAGATATGGGCTTTACATATGTAGACAATGTACCAACAAAAATACACATCGTCGATCCACCAATAGCATTTAACCAATCCCAACCAAGGTTTTACCCCCAAGCGGATTTTAGAGTTTTCCACCAAATAGATTCAGTAAACGAGCTTAGACCAAAACCAAGACATAGCTCTCACTTCGTAGCGCAACCCCAAATGGGTTCAGATGACAGCCAAATGGATTCAGTAAAAGAGCTTAGACCAAAACCAAGACATAGCTCTCACGTAGCAGTGCAACGGGAAATGGCTACAGGTGTCAGCCAAATGGATTCAGTAAAAGAGATTGGACCAAAACCTGGACAAAGCTTTGACCTCAACCGTAGTAGACCAATTCAACATGAAATGTACATCCGTCAAACTACAGCTAATAATGAACATGATATACACTACGCTGACCATGAAGTGGAACCTCGTACACAAGGATGTGAAACTGCATATTTTCAAAGCGGTATACCCGAGATATTACCcgAGGGACCTGCAATATATCCTTCAGATGCTTTGGTGATTGATGGTGTTGAAGTTCGTACAAAAGTGCAATGGACTCCTTATTCGGAGCTCCGTAAAAATCATGATTTAATAGAGCACCTAGGCAAATCTGCTACACAGAAGGAAGCACTAAAGTGGAAGATACTTTCAGAAGCCTACAAAGATAATGTACCACAATCAGGAGTATTGAGGATTTTAGCAGAGTCGTTTGTTTCCCGTGTTAACCAGTCTCTGCGTCGATATCGTGATGCTGAATGCTTTCCTTGTATTAATGTTGACAAAGATATATTaccgaaagtaaaaaaactacttAGTGTTCGTACTGTACATGGAAACGGTTGTGTACATACGGCTGTAATACATAAGCAGATTGACGAATTACGTACTTTAATAAGATATCTTCAGCTTTACAAAAGTACTGAATATATTAATGATACAAATTCATCACAGCAGacAGCTCTTCATTTGGCAGTGTATGATGAGagtaaaattaatattgagaTGATTAAGATGTTAATTGAAGCTGGAGGTGATGCAAACAAACCTGATAAATATGGCCGCTCTACTCTTCATATTGCAGTTAGACTAAATCATAGATCCATTGTTAAGTGTTTATTGGAAACTCAACAAATTGACATCGATTATGTTTCGGAAAGTGatGGGACAGCCTTACACATTGCAACAGAAAATAATCGAGTAgacattgtaaaattattattggaATATGGTGCTGATGTAAATAGTATTAATCACAAAGATGGTCGAACTCCACTTCATATAGCTGTTAGTCATAAAAATGAGGATATTGCTTCATTGCTTGTTCAGCAGTGTCTATTGTTAGTTCAGCCAATAGCATAG
Protein Sequence
MFDNGNDEWEVRQDIFEEEILPFKSDFGFDDIFQDEPRGMFDDILSIVSRMLPHSFFDTVYIKLQSTEKPKTIIKSGIEQFPNEHLNYFIENLRNKRQAGLSSITPHFNSQLTTTSGLSKEGSINTNHNNDIDSLISTIITLANDNASATDESLISTAKAMLNNTNEEMTHLTVNINTGDKQHSTDANTLNMKLSSDPLSAEVTNTVSKLKHSTSSVKESTYNQEADNKLSISLFDTADSEPGEMDLNSGTKNVNPNHVDMRDERIHEAALPNEEGDSDTSKRDTNVFFIILGVIPGIVGGSISSPPTPYSTDVSNSSTGSIFNPSPTMYTFQRSPDPIAYNKPGRPCLELVEQTAPMFRFRYVTEMQGTHGAIRGINSGKNEKTFPTVKLCNYNAPAVIRCTLYTVDKKSLHVHRLVGKCSGEKKDDPHDIQVGPNRHNGFIASFQNLVIIHTAKKQLVNELIEKKKRVIKANYPNSVGFDIAPETLKKMQKEAQEETKKMDPNCACLRFEALILQNGHYVPLPDCKPIYSNGIKNMKNHVTGQLKICRIDRVSGSCEGGDEIFLFVEKVGKDNVKVIMTECDEFGEEVWHDYCTFSPSDVHHQFGIVCKTPKYRSSDIKQKVTVKLQLERKTDCARSEPVEFTYKPRDHHVQFTESCKRKRLASEISSVDLPHVSPPQNLEVTSTTGLETSDHVLRHKIPFGNLSVFDYDDNMEQDPMWSKDYVALADDSELFAPFEKSTSFTEIVEQLPTPDYDQIKTVCNSDPADMGFTYVDNVPTKIHIVDPPIAFNQSQPRFYPQADFRVFHQIDSVNELRPKPRHSSHFVAQPQMGSDDSQMDSVKELRPKPRHSSHVAVQREMATGVSQMDSVKEIGPKPGQSFDLNRSRPIQHEMYIRQTTANNEHDIHYADHEVEPRTQGCETAYFQSGIPEILPEGPAIYPSDALVIDGVEVRTKVQWTPYSELRKNHDLIEHLGKSATQKEALKWKILSEAYKDNVPQSGVLRILAESFVSRVNQSLRRYRDAECFPCINVDKDILPKVKKLLSVRTVHGNGCVHTAVIHKQIDELRTLIRYLQLYKSTEYINDTNSSQQTALHLAVYDESKINIEMIKMLIEAGGDANKPDKYGRSTLHIAVRLNHRSIVKCLLETQQIDIDYVSESDGTALHIATENNRVDIVKLLLEYGADVNSINHKDGRTPLHIAVSHKNEDIASLLVQQCLLLVQPIA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-