Basic Information

Gene Symbol
THAP3
Assembly
GCA_963564715.1
Location
OY751356.1:12086577-12108638[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.03 3.5 9.6 0.9 1 23 363 385 363 385 0.98
2 11 0.0024 0.29 13.0 1.2 1 23 392 415 392 415 0.93
3 11 0.36 42 6.2 0.2 1 23 419 441 419 441 0.92
4 11 0.051 5.9 8.9 1.0 1 23 446 469 446 469 0.98
5 11 0.0035 0.41 12.5 0.7 1 23 473 496 473 496 0.96
6 11 5.3 6.2e+02 2.5 0.1 2 21 509 528 509 529 0.88
7 11 0.21 25 6.9 0.2 3 23 587 608 585 608 0.96
8 11 0.0051 0.6 12.0 0.6 2 20 624 642 623 645 0.92
9 11 3.8e-05 0.0045 18.7 3.1 1 23 651 673 651 673 0.99
10 11 0.00029 0.034 15.9 2.8 1 23 680 702 680 702 0.98
11 11 0.0047 0.55 12.1 4.9 1 23 708 731 708 731 0.90

Sequence Information

Coding Sequence
ATGAGGTGCAGTGTGCAGAATTGTACAAATGACACGAAGAGAACTACTAAAAGCCATGGAATAACATTTCACATGTTTCCTAAAGAACCAAACCTTCGTACAGCATGGGTGGAAGCTCTTGGCATGGTAGACTGGGAACCAAAAGAACGAAGCACCATATGCTCTGAACATTTCCGTAATGAAGACTTCTACGAGACCAAGAGAGGATTACGAAAGATCAAGGGTGGTGCAGTACCTGTTGTGGCACAGgaTTCTGCGGACGACCTCGATGCGCCTGCCGCGTTGAGAGTATGCAGAGTATGCCTGGCAATGGATGTAAGGATGTATGACATTAGAGACCACAAACTCGACCACATGTATGAACAGGTGTCAGGCATATTGACTGCCGGTGAGGAGCGGCTACCACAGCGGGTATGTTGGGAGTGCGCCGCACGACTCTCGTCTGCCACTCGCTTCAGAGCGACGGCCTTGAGGAGTCATGCGATACTACAAGATCTGTTATCTCCTGAtacttatATAAAAATCCGCGacataaaatcaataaacaGATTGCACAGCGGTCTGAAGTCTCCTCTGATTCAGAAAATATACGAAAACAGTGACTACGACCTGCACATAAGAGATGTGTTCGTTAAAGAAGAAGATGAGGTGGAGATGCCAGCGGAAGTGGCGAGGGAAAGTGACGACGGAGTGGAGATTGAGGTTAAGGATCTGGTCCCTATTACTGAGGTAGAAGTTAAAGATGAAGGTAGCAGTAACGAAATATTCTTTGAGGAGTTCGATCattttgatgatgatgacgacaAGGCGCTGAGCGAAGTGTACGGAGAGAAGGTAAAAGAGAAAGTTAAAGTTAAAAAGAAGAAGGAGAAAGAGAAGCCGGTCAAGAAGATCAAGGTTAAGAAGATAGAAGAAGATGATAGTCCCGATACTGCTACTGATAGATATAAAAAGAACGACGTGAAACGTCGACGTCAGACCGAAGCGTTGGACGAATCCCTGTTCACCATCACATCTCTGTCCTACGACCAGCAGATCGAAGAAGTGTTAAAGCGACAGGAGAGCACCAGTTATACCAACGCGATGTATAAGTGTACGATATGCTACAGGGGGTTCCAGATCAAGGATCGGTATACTGCTCATGTGATCAGGCATAGCGAGCAAAGTGGAGCGTACGAATGTTTCATATGTAAAACAAGACTGAAGACTAGTCGAGCGCTTAGGAAACACCTGACCGCCCAACACACGGAGCAGTACAGCTGTAAGGGATGCCCTTTTGTTACTAGAAATAGaGGTGTGGCAAGGGAACACGAGAAATGGCACGCCGGCACCAAATATCAATGTCCTCATTGTGCGAGCGAATTTGACAAGCTGACAACGTACATGGGACACATTCGTATCAAGCACGTATCTGACTTTGTGTGTGAGCTGTGCGGATACACTTTCGTCAGTAAAAAAGGCATCGACGTACACAAGAAGAAGAAACACAGACTTGTGGATAAGAATATATCGTTGGAGGGACCATACTGTGACGTGTGCGAGGTCAAGTTTATATCGGAGGAGGCTCACGAGAGGCATCTCAAACTATCATCGAGACACAGCAGTGATCACGACCCtAATCGCATACGGAACGACTCTCAGAGTATGAACGCTGAGCGCAACGGTCGCGTGGTGCGCAAGATTGAGCGACGACCTGTCATACACCCGCGGGACCCGCAGGACAGACTGACTCAGCACGAACCTCATACACCAGTTAATTGTGAACAGtGTGGCATCCAACTACGAGATCTACGTTTATACGCACAGCACTTTAGAAGAGCACATCCCGACAAGAACAGGACAAAATATCCAGCGATGAAGACTCCCTGTATGTGCGAACAGTGCGGCAAAATATTCCAGAGCATGGCGTTGCTGAAGGACCACATGTGGGTGCACACGGGCGAGAAGCGCTTCAAGTGCGACCGCTGCACCAAGAGCTTCACGCAGAAGACCAACCTCGTGTTCCACATGCGCGTGCACAGCGCCTCGCGCCCCACCTACGAGTGCCCGCTGTGCGGGAAGCACTTCGCCTTCTTCAATAACAGGAGACGACATATGTTTATCCACACAGGCCTCAAACCGTTCAAGTGCGACACCTGCGGCAAGTGCTTCACGACATCAGGCGAGCATCGCGCGCACGTTGAACACGTGCACTTGAAGAAGCCGTGGCCCAAGCGAGCCAGACACCGGCGAGACTGGAAGTGCGACGAGCCTAGTGTTGAAGACTAA
Protein Sequence
MRCSVQNCTNDTKRTTKSHGITFHMFPKEPNLRTAWVEALGMVDWEPKERSTICSEHFRNEDFYETKRGLRKIKGGAVPVVAQDSADDLDAPAALRVCRVCLAMDVRMYDIRDHKLDHMYEQVSGILTAGEERLPQRVCWECAARLSSATRFRATALRSHAILQDLLSPDTYIKIRDIKSINRLHSGLKSPLIQKIYENSDYDLHIRDVFVKEEDEVEMPAEVARESDDGVEIEVKDLVPITEVEVKDEGSSNEIFFEEFDHFDDDDDKALSEVYGEKVKEKVKVKKKKEKEKPVKKIKVKKIEEDDSPDTATDRYKKNDVKRRRQTEALDESLFTITSLSYDQQIEEVLKRQESTSYTNAMYKCTICYRGFQIKDRYTAHVIRHSEQSGAYECFICKTRLKTSRALRKHLTAQHTEQYSCKGCPFVTRNRGVAREHEKWHAGTKYQCPHCASEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGIDVHKKKKHRLVDKNISLEGPYCDVCEVKFISEEAHERHLKLSSRHSSDHDPNRIRNDSQSMNAERNGRVVRKIERRPVIHPRDPQDRLTQHEPHTPVNCEQCGIQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGKIFQSMALLKDHMWVHTGEKRFKCDRCTKSFTQKTNLVFHMRVHSASRPTYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCDTCGKCFTTSGEHRAHVEHVHLKKPWPKRARHRRDWKCDEPSVED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00450559;
90% Identity
iTF_00678043;
80% Identity
iTF_00282463;