Basic Information

Gene Symbol
ZNF532_1
Assembly
GCA_963564715.1
Location
OY751353.1:4342288-4346919[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.16 19 7.3 0.0 2 23 2 24 1 24 0.94
2 17 4 4.6e+02 2.9 0.4 3 23 50 71 48 71 0.91
3 17 1.5e-05 0.0018 20.0 0.7 1 23 119 142 119 142 0.96
4 17 0.46 54 5.9 0.5 3 20 149 166 148 168 0.93
5 17 3.2 3.8e+02 3.2 4.4 3 23 177 198 175 198 0.89
6 17 0.00083 0.097 14.5 0.5 1 23 205 228 205 228 0.97
7 17 0.013 1.5 10.8 3.2 1 23 233 255 233 255 0.97
8 17 4.4e-06 0.00051 21.7 0.7 1 20 261 280 261 283 0.94
9 17 0.021 2.5 10.1 1.0 2 23 325 347 324 347 0.93
10 17 0.13 15 7.6 6.1 1 23 416 438 416 438 0.98
11 17 0.025 3 9.8 2.6 1 21 442 462 442 463 0.93
12 17 3.8 4.4e+02 3.0 0.8 2 20 473 491 473 493 0.90
13 17 0.19 22 7.1 0.5 1 23 500 523 500 523 0.92
14 17 4e-05 0.0047 18.7 0.1 1 23 530 553 530 553 0.96
15 17 0.0003 0.035 15.9 0.2 2 23 559 580 558 580 0.96
16 17 0.00048 0.057 15.2 0.1 1 20 586 605 586 608 0.93
17 17 6.5e-05 0.0076 18.0 3.9 1 23 614 637 614 637 0.97

Sequence Information

Coding Sequence
ATGGTGTGCGTCTACTGTGCAGACCCTTTCCAAGATCCCGTAGAGTTCAGGGCTCACATGAACAAGGACCATAGGACCTTTAATTCCCGCATGGCTTTCCTCCACTGCTCCGAAGGGTACATCAAAGTTGATTGCACCGAAATAAACTGTAGGATATGCTCTGAAACGTGTCAGAATCTCGAAGAGATAGCTGAACATTTGTTCTCCGTACATAAGAAACCATTAAACTTAACCGTCGAGTGCGGATTGCAGCCTTTTAAGCTGGAGAAGAATAAGTTATCTTGCGCAATTTGCAACGCCAAATGCCTTTGCTTGCGACAGCTTAGCAGACACACTCAAAGCCATTTCTGGCGATACACATGCGAAGCTTGCGGCAAGTCGTACGCGACTAACACCACTTTACGTAGCCACATAAGATTTTCCCACATAGATAACGAAAGAATATGTCGAAAATGTAAATCTACTTTCAGTTCATTGGAAGAAAAGCGAAAACATTTGGCCGAATCACCAAGATGCTGGTCTCATTTGTGTTGCATGTGTGGAGAACGTTTCATGACTTACCATTTAAAACAGCAACATTTAGCCGAAGTACACGAggttaaaaagaaaagttaCATCTGTCTAGAATGTGGAGAAATATTCATTGACCGCAAGAAGTATAGAGTGCACTTTAGAATCTTTCATACAGATGACAACTATACGTGTTCTTGTTGCGGTATGAAATTCGAGACAAAACGCACTTTAGAAGACCACAGGGTAACTCATACGATGGAGAAGTTGTTCCCTTGTACAGTCTGCTCCAAGTCTTTTCCTAGGAAGAAGAATTTGAACCAGCACATGTGGATCCATAGGGAACATAAACGGTTCGAATGTACGCTTTGCAAAAAAAAGATCATCGCCGCGAGAAGGAACGCGCGAACGATCATACAATATACCACAGCTTACCCCTTCAAGCTACCGGACACCTCCATGGTATGCGTGTTTTGCTGCGAAAGCTACGACGACCCCTCACAGTTTAGAAATCACATGCGCCTCGAACATCAGGACTTCAAAATGCATATAGCGTTCGCTCACATCCCCGAAGGATTCATTAAAGTCGACTGCACTGAACTTAGTTGTAGGTTATGCGGCATCAATCTCGTTAATATACAACAGGCGGCAAACCATTTAATAGAAACACATAACAAACCCATCAACCTCAATCATGACCTAGGTATGCATCCCTTTGTCGTTGAAAAGGATAAATACTCGTGCGCTATTTGCCATGAGAAACATTCAACTTTGTCGCTCCTAAGCAAACACATGCATAGGCATTTCGTTCAGTATACATGCGATGCTTGCGGCAAATCATACGCGACGAAAACCTCTCTACACTGTCATTTAAGATACAACTGCGGCACTGGACCGTCATTGAGGAAATGTAGAAAGTGCAAAGGCGTTTTCAAGTCGATTAAAGAGAGGCAGGAGCATTTGGAAAAGTCGAGGCGGTGTTGTCAACATGTCTGCAACTTGTGTGGCGACCGGTTTGTGACGTGGACGGTAAAACAGAGTCATATGACAGAAGTGCACAATGTGCCAGCAAAGACTTATCCTTGTCCGGAATGTTCCTTAGTTTTCGCACAACGGGATAAACTTCGAGCTCATTTCAAAATAGATCATACGAACGACTATGTCGAATGTTCTTACTGTGAGAAACGGTTCGAGAATGACCGAGGTTTGAAGAAACATATCGTGATTCATACGGGAGAAAGGAGGTTCATTTGTACGGTTTGTGCTAAAGCATTTCCTAGAAAGTCTACGCTCGATCAGCACATGTGGATACACAGTGAAGTTAAGAGGCACGAATGTAAAATGTGTGATAAACAGTTCAACCAAAAAGTCAGTTGGCGAACGCATATGAAGTCAAGGCATCCAGAGTTGTGTAATTTTTAG
Protein Sequence
MVCVYCADPFQDPVEFRAHMNKDHRTFNSRMAFLHCSEGYIKVDCTEINCRICSETCQNLEEIAEHLFSVHKKPLNLTVECGLQPFKLEKNKLSCAICNAKCLCLRQLSRHTQSHFWRYTCEACGKSYATNTTLRSHIRFSHIDNERICRKCKSTFSSLEEKRKHLAESPRCWSHLCCMCGERFMTYHLKQQHLAEVHEVKKKSYICLECGEIFIDRKKYRVHFRIFHTDDNYTCSCCGMKFETKRTLEDHRVTHTMEKLFPCTVCSKSFPRKKNLNQHMWIHREHKRFECTLCKKKIIAARRNARTIIQYTTAYPFKLPDTSMVCVFCCESYDDPSQFRNHMRLEHQDFKMHIAFAHIPEGFIKVDCTELSCRLCGINLVNIQQAANHLIETHNKPINLNHDLGMHPFVVEKDKYSCAICHEKHSTLSLLSKHMHRHFVQYTCDACGKSYATKTSLHCHLRYNCGTGPSLRKCRKCKGVFKSIKERQEHLEKSRRCCQHVCNLCGDRFVTWTVKQSHMTEVHNVPAKTYPCPECSLVFAQRDKLRAHFKIDHTNDYVECSYCEKRFENDRGLKKHIVIHTGERRFICTVCAKAFPRKSTLDQHMWIHSEVKRHECKMCDKQFNQKVSWRTHMKSRHPELCNF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00678028; iTF_01152433;
90% Identity
-
80% Identity
-