Basic Information

Gene Symbol
-
Assembly
GCA_963564715.1
Location
OY751327.1:6463090-6473397[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 8e-06 0.00094 20.9 1.3 1 23 202 224 202 224 0.99
2 31 0.0014 0.17 13.8 1.0 2 20 256 274 255 276 0.93
3 31 8.3e-06 0.00098 20.8 0.3 2 23 311 333 310 333 0.96
4 31 0.6 71 5.5 0.8 2 18 350 366 349 369 0.81
5 31 0.0052 0.61 12.0 1.2 1 23 380 403 380 403 0.97
6 31 0.031 3.6 9.6 0.5 1 23 421 443 421 443 0.95
7 31 4.7e-05 0.0055 18.4 0.8 2 23 482 504 481 504 0.97
8 31 0.0011 0.13 14.1 3.8 2 23 543 565 543 565 0.97
9 31 0.0086 1 11.3 0.4 1 23 615 638 615 638 0.97
10 31 0.00059 0.07 15.0 0.1 1 23 693 715 693 715 0.97
11 31 0.0075 0.87 11.5 7.2 1 23 726 748 726 748 0.98
12 31 0.026 3.1 9.8 1.4 2 23 760 781 759 781 0.96
13 31 0.0047 0.55 12.1 0.5 1 23 791 813 791 813 0.98
14 31 0.0087 1 11.3 6.7 1 23 842 864 842 864 0.96
15 31 0.003 0.35 12.7 3.9 1 23 875 897 875 897 0.98
16 31 8.1e-06 0.00095 20.8 0.7 1 23 905 927 905 927 0.99
17 31 0.00019 0.022 16.5 0.5 2 23 947 969 946 969 0.97
18 31 0.83 97 5.1 0.1 1 23 987 1009 987 1009 0.91
19 31 0.12 14 7.7 3.7 1 23 1016 1038 1016 1038 0.97
20 31 0.011 1.2 11.0 2.0 2 23 1049 1071 1048 1071 0.94
21 31 0.019 2.3 10.2 0.2 2 23 1094 1115 1093 1115 0.95
22 31 4.8 5.6e+02 2.7 5.6 2 23 1158 1180 1157 1180 0.95
23 31 0.0022 0.26 13.2 0.3 2 23 1196 1217 1195 1217 0.93
24 31 1.6 1.9e+02 4.2 4.7 3 23 1225 1245 1223 1245 0.96
25 31 0.015 1.8 10.5 0.8 2 23 1256 1278 1255 1278 0.95
26 31 0.25 29 6.7 4.3 2 23 1295 1313 1295 1313 0.94
27 31 0.68 79 5.3 1.3 2 21 1317 1336 1317 1337 0.92
28 31 4.1 4.9e+02 2.9 2.7 2 23 1358 1379 1358 1379 0.93
29 31 0.56 66 5.6 0.9 2 23 1386 1407 1385 1407 0.93
30 31 0.00079 0.092 14.6 0.7 2 23 1418 1440 1417 1440 0.96
31 31 2.2 2.6e+02 3.7 2.3 2 20 1478 1496 1477 1498 0.91

Sequence Information

Coding Sequence
ATGGCCCTCAAACTTGGAAAATGCAGGCTTTGCCTCAAGCTTGGCGACTTCTACTCCATTTTCACAGTGGACAATTCATTACAGCTGGCGGAGATGGCAATGGAATGTGCTCGAGtgaaaATTTACGATGGAGATGGACTACCGGATAAAGTATGCTCTGAGTGCATACAGAAGCTCAGCAGTGCatatatattcaaacaacagtgCGAGCGTGCCGACCAGGAGCTACGAAGGAACTATGTCCCGCCTCCAGGTTTTAGTATCAGTCCACCGCCTCCCAATAGACAAAGCAGCGATTCTGCATTCTCCAATCACACCGATAGCTCAAACTTAACCAAACCCTCGTCGTCTATTGAAGAAAAGATATCCCCAAAAATTAGGACGCGTAAACGAAGCATAGACAGCGATGGCAACACCTCGATAGGAGGCCGTTCCAGCGATTTCAGGCCTACCAGCTCCAAACGCGTCCAAGAACTTAGGAATTCGCAAAAGAGGCAATGCTTACAATCTGGTAACACCTCGCAGCCTGACTCTGATTACGAAGACAACAGCGGTTCCTACATACCTGAAACTGATTCTGACGAACCGCTTATGAAGAATGCTTTCAAATGCAAAACATGTCCCAAAGAATTCTCGAGCCGCAAGAGTCTAGCTATCCACACCCGAGTGCACGTGAAGAAAGTCGAGGATACTGTCGCCAACGACACCGTCGTCGATACTCCGAAGAAATATGGCGAGGATGCCGCAGACGTTGAGGACAAGCTAAGCTGTGACAAATGCGATAAGACCTTCAAATTAAAGATCATGCTAAAACGTCATCACGATATTTGCGGCAAAATTCCAGTCAAACCGCCGCAAAAGGAGCTCCTCATATCCTTAGAACCAATCGACGGTAAGCAGAATTGTCTGCAGTCGTCTGTAAACAGTATCACCTGTGAATATTGCTCGGCCAAATTCAAGACCCTTGATAACCTAGCTAAGCATATGAGAGTGATACACGCGGCCGTGTTGAAACGGGAAGTTGAACCGATCAGAAAAGTGCCGGTACCTTGCCTCTACTGCGATAAGTCATTCGACGATTATTACCAACACAATTCGCATTTCAGTGAGTGTCCGAAAATGGATGAGTCTAAACCATTTGAGTGTCCTGTTTGTAAGAAACTGGTGTCTAGAAAGACGTCGTACTATCAGCATATAAAGAACATGCATTTTGAGCCTCGTATGTTGTATGTGGAGAATGAAGTTGAACAGCAAGAGTACCATGAGTGTCGGATGTGCCTAAAGAAGTTGGCTTCGCAGGAGCAGCTGATCAAGCACTTGGCGGCGCACGTGTCCAATATTGAGGATGACGGCGCAGGTGATGATTCCAGAGCGAGCACTGCTGATGATTCGGTTTCAGTACACTCAGTAGCAAGCAATACTTACCCTCCTGGCGGTACGGTCAAATGTGATATTTGCGACAAAGAATTCAAATATAGAAAAGCTCTTGCAACTCACCAGCAAAAATACCATACGGATGTACCCATAGAAGTCAAGTTTGAACCGCCCGATAAAGCGTCGACTAGCCTCCTAAGCGAGAAGCAGTATCGTTCCGAATCAGAATCTAGTCAGGAAGAGGAGGACAACACTTGTGAAATTTGCGAGAAGCAGTTCTCGTACAAGCGTCTCTTAGTCCACCACAAGAGAACGAAACATAACATGGGGTCCGGACACAAGCGCGCCAAGATCTACCTCAAGGACTGCTCGGTCCGCTGTCTCATCTGCGACTTGGACATGAAGGTCGGAGACATAAACGAGCATAACCAGACGCATATAGCGAAGAATATGAAGCCTAGGAACCTCTACACGTGCGCGGAGTGCGAATCTACCTTTAAAGCGTGCAGTGCTCTCGCGAACCATATAAAGCTAGTTCATAGATTAAAACAGAAAGTTGAACAGAGTATGGTAAATCCATCGGATTTTTGTGAAGTCGTTGTGACAAAGTCGGAACCCCTGGACTGGATCCAGAGTCACAACGACTTTGGAGAGGTTCCGGTCATTGGGCAGGAGGGCAAGCCGCTGGTCGATCTGAGCGGCTTCACATGTCCCATCTGTGGGAAGAAGATGCCCACACTGATATCGCTCAAGAGACACGTCAATTGGCACACTAACGTTGGCAAAAATCTAGAAAAGAAGTACGAGTGCTTTGTATGTAAAGAGTCGTTTAGATTTCAATGTCACTACAAGCTACACATGCGTGAGCACTACACAGATACGAACCTTGACCCTACACTGCTCACGTGCAAGATCTGCGGCCGTAAGAGCAAACACCTTCGAGCTGCGCAAGCTCACATGACTTACCACAAACAGACTCGCTTCAAGAACAAAGACTACCAGTGTTCCATCTGCGAGAGAGTCTTCCAGTACCGCAAGGTATACCTCTCCCACATGGCCATACACTACAAGCGAGGTGATAGCGCACAAAACACAATAATAGGCGATGCCATACCCAACAATGCTGACAAAGCCGTCTTCGACGGTACCCACACCTGTCCACACTGCAGCAAAGTGTGCGACTCCGAGAGCTCATTGAAACACCATGTGAGCTGGCATACCTCTAAAACTTTCCTTTACGGTGCTCGACACGAATGCCAGGTATGCAAGGTCAAATTCACCAACAAGAGGCGGCTGGAATTGCACACCAGGACACACTACGAAGACGATAACGGCCCCTACAAGTGCCCCAACTGCGGGAAAGGCTACACCGATGAAGGCTACTACAAGAGACACGTTAAAAGTCACAACTTTGACCATCTGTGTCACAAAAAGAGGATTGAAAACTTAAGGAAAGATAAAGTCAAGTGTCCCATATGTTCGCGGTATTATAAGGACTTGGGGAAGCTGATTCGTCATTTGAGACGGACGCACCCCGAGAGTAAGATGATTAAAACAGACCCAGATGCGCCACCGCAGCTGTATTACTCATGTAAACTGTGCGCCAAAGTGTTCCTCGATGAAAGGAGACTCCAGGCACACGAAGAGGCGCATTTACGGAAGCCGGAGTTCTTTAAATGCAAGTTCTGCGGTAAGAAGACTATATCTTTGAAGAATCATAGAGTTCACATAAAGGGTCATCTTACGCAGAAATATCTTGATAACCCTTTGAAGTGTCAGCACTGTGATGAGACGTTCGGGCGAGGTTACGACCTGCATTACCATGTGCGTGACGTGCACGGGATCGAAGAGACGTGGATCGCCGAGCGCACAGAACAGCGCCTCACCGGCCCCCTCAAAGATCTACAATGCTCTATATGCATGAAGGTGCTCGCCAGCAAAGGAAACTTCGAGCGACATCTCGACTATCATAACTCCTTGAGGTGCAACTACTGTTTCGACTACTTCAGCTCTCTTAGATTCCTCGAGGGTCACTTAGCATTCTCCTGCGAAAAGAAAAAACTGTTAGGCGATACGGAGATTTAtcctaagaaaataaaatgccaTATTTGTTATAAACCTTTCCATGTGCAAGTGAAGTTGGACTGTCATTTGCGCACTCagcataatattaaagtttccAAAGAGGCTTCAACGGGTAAGAAAGAGATTGTTTGTGACTACTGCTTCAAAGTATTTGAGAACGAGTATGCTCTCACTACTCACAAGGTGTACCACCGCACTGTTGGCTACTTCGGGTGCCTTTATTGTAAGAGGAAGTTTGGCACCATGACTCTTTATAGAAAACATAAGAACCACCACTTCGCACAAATAAACGCGGACGAACCGACGAAGTGCGAGCATTGCGACGAGACATTCGTAGCGTTCAGAGACATGATATACCACATGAGGGACGTCCATGGTGATGACAAAGACTGGGTGACTTTACCCAAGGAGTCCATAGAAGAGACCTGTaagatttgtaataaaacattctTCAACTTGCACCGACACATGGCCTACCATGAGGAGAACAGGTGTAAAAAGTGCGGCGAGTATTTCTTTTCGACTGCAGACTTTGATAACCACTTGTGCGCCATAGAGAGTGATGATGAAGGAAACACTAGCGTCAGCACCATCGAGCGGCCGAAGTACGAGGAGTGTAGCTTCTGTTTCAAACCTACTACCAGAAAGAGTTCTAAAGCGATGCACGAACATATACACAAAGGCTCCGGATCCATTTCGTGTAGATTCTGTTCCCTCAAGTTCAAGACTATGGATGCGTTCAATATTCACGCCTTCTCCCACCGCAGTAGAAAGTATAACAAGAAGCCGATAAAGTGTAGAAAATGCGGCGAGAAATTCGTTAAATACGGTTTATTCATAAAACACATGAAACTAGTGCACAAGTCTTTGAAGAAGATGCATTACAGGGCGATGGTGAAACCGGAGCCGTGCGTAGTTTGCGGCGATGAGTTCCCCAACCTGCACAACCACTACCGCGCTCACTTGCTGAACCAATGCCAGTCCTGTCAAAAGTACTTCACATCATCTAAGTTGATCTCCTTGCACCAATGTGACAAAGAAGACTCGGATCCTTCTAAAGTATTTACGAGCGATGCGAATTTGAATGAGCTGATTAACACATACGTTCCTAAAGATATGAAGGACGACGAAAAGTACTACGGCCACACTGACGGTGAGGATACAGACGAAGAAGATACATTTCCGCAGGTGTGCGGCGAGGACGACGACAGTCAGGacagtaaaaattacaaagATATTGATATCAAAGAGATTGATATTGATAAAGATGATATAACCATCCAACCGTTGTCTATCCAGTCGCCGATCATATCCGATGTGTTGTCGCTGTACCAGAAGGAGATGACGCCCACTGTTTTGGACGATAATATCGTGAACCTAACTGACGACGATTCTATGGACGTGGTCCAGCACCAACCTGATGCTATTGTGAtcattgatgatgatgatgattga
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNSLQLAEMAMECARVKIYDGDGLPDKVCSECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDSSNLTKPSSSIEEKISPKIRTRKRSIDSDGNTSIGGRSSDFRPTSSKRVQELRNSQKRQCLQSGNTSQPDSDYEDNSGSYIPETDSDEPLMKNAFKCKTCPKEFSSRKSLAIHTRVHVKKVEDTVANDTVVDTPKKYGEDAADVEDKLSCDKCDKTFKLKIMLKRHHDICGKIPVKPPQKELLISLEPIDGKQNCLQSSVNSITCEYCSAKFKTLDNLAKHMRVIHAAVLKREVEPIRKVPVPCLYCDKSFDDYYQHNSHFSECPKMDESKPFECPVCKKLVSRKTSYYQHIKNMHFEPRMLYVENEVEQQEYHECRMCLKKLASQEQLIKHLAAHVSNIEDDGAGDDSRASTADDSVSVHSVASNTYPPGGTVKCDICDKEFKYRKALATHQQKYHTDVPIEVKFEPPDKASTSLLSEKQYRSESESSQEEEDNTCEICEKQFSYKRLLVHHKRTKHNMGSGHKRAKIYLKDCSVRCLICDLDMKVGDINEHNQTHIAKNMKPRNLYTCAECESTFKACSALANHIKLVHRLKQKVEQSMVNPSDFCEVVVTKSEPLDWIQSHNDFGEVPVIGQEGKPLVDLSGFTCPICGKKMPTLISLKRHVNWHTNVGKNLEKKYECFVCKESFRFQCHYKLHMREHYTDTNLDPTLLTCKICGRKSKHLRAAQAHMTYHKQTRFKNKDYQCSICERVFQYRKVYLSHMAIHYKRGDSAQNTIIGDAIPNNADKAVFDGTHTCPHCSKVCDSESSLKHHVSWHTSKTFLYGARHECQVCKVKFTNKRRLELHTRTHYEDDNGPYKCPNCGKGYTDEGYYKRHVKSHNFDHLCHKKRIENLRKDKVKCPICSRYYKDLGKLIRHLRRTHPESKMIKTDPDAPPQLYYSCKLCAKVFLDERRLQAHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYLDNPLKCQHCDETFGRGYDLHYHVRDVHGIEETWIAERTEQRLTGPLKDLQCSICMKVLASKGNFERHLDYHNSLRCNYCFDYFSSLRFLEGHLAFSCEKKKLLGDTEIYPKKIKCHICYKPFHVQVKLDCHLRTQHNIKVSKEASTGKKEIVCDYCFKVFENEYALTTHKVYHRTVGYFGCLYCKRKFGTMTLYRKHKNHHFAQINADEPTKCEHCDETFVAFRDMIYHMRDVHGDDKDWVTLPKESIEETCKICNKTFFNLHRHMAYHEENRCKKCGEYFFSTADFDNHLCAIESDDEGNTSVSTIERPKYEECSFCFKPTTRKSSKAMHEHIHKGSGSISCRFCSLKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCGEKFVKYGLFIKHMKLVHKSLKKMHYRAMVKPEPCVVCGDEFPNLHNHYRAHLLNQCQSCQKYFTSSKLISLHQCDKEDSDPSKVFTSDANLNELINTYVPKDMKDDEKYYGHTDGEDTDEEDTFPQVCGEDDDSQDSKNYKDIDIKEIDIDKDDITIQPLSIQSPIISDVLSLYQKEMTPTVLDDNIVNLTDDDSMDVVQHQPDAIVIIDDDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01502316;
90% Identity
iTF_00281610;
80% Identity
-