Cnup038465.1
Basic Information
- Insect
- Catocala nupta
- Gene Symbol
- -
- Assembly
- GCA_963675205.1
- Location
- OY776097.1:21264594-21266867[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-09 2.8e-06 28.7 0.0 3 39 18 53 16 59 0.89
Sequence Information
- Coding Sequence
- ATGTCTAAGAAAACACCCAAACAAATACGTCGACGTAAGATATACGACTCGGAAAACTTAAATAAGGCCTTGCAAGCTGTCAAAGAAGGAATGAGCAAGAAATTGGCAGCAAAGACCTATCAAGTGCCGCGGGCTACTTTGCAATATAGGATTAAGAACCCTGAGCACCAGTCACGTCCAGGCCCTCCTACTATTCTGACGGAAAAGGAAGAAAAAGACCTTGAAGATTGGATTTTACTTAGTTGTCGAAAAGGTTTCCCAAAACGCAAAGATGATTTAATTAGTAGTGTAGCGAACTTTCTGAAAAACAGTAACAGGGCCAGCGTTTTTAAGAACGGTGAGAAGTGGTATAAACTATTTCTTCAACGACATCCTAACATTTCTGTACGCACACCTGAGGCAGTCACAGCAGCAAGTGCTGCCGTGTCAGAAAACGACGTGAGAGCCTGGTTCAATCAAATTGAAGTTTATCTTAAAGAaagtgatttatttaatatactttcaGATTCATCCCGAGTATTTAATGGCGATGAGACAAATTTTCTTCTTTGTCCTAAAACGGGAGTCGTATTGGCTCCTAAAGGCGAAAGAAATGTCTACGAGGTAGACAATGCGCTGGCTAAAACTTCCTTGACTGTAATGTTCACATTTTCTGCTAATGGAGATCTCACACCTCCAATGGTTATATTTCCGAATAAACGATTATCAGCTGATATTACGTCCAAAGTTCCATCAGATTGGGGTATAGGGCTGAGTGACAACGGGTGGATGAAGGCCGAAGTTTTTCACGATTACATCGAGAATGTACTACACACTCACTTGATCAAAAAAGGAACTCAATTCCCCATAATATTGTTTGTCGACGGTCACAAGACCCATTTAACATATGCCGTTAGTGAGCTATGCAAGAAGTTGAAAATTGTCCTGATTGCTTTATACCCTAACTGTACCAGATTACTACAGCCAGCTGATGTGTCAGCATTTAAGCCATTAAAATCTGGGTGGCAGAAAACTGTTTTGGAGTGGAGGCGAAATAATCCATCAGTAGCTCTCACTAAGATCAATTTCGTACCGCTTCTAAACAAAACCATCAAAAACACGATCACGGCATTAACAGTTATTAATGGATTTAGAGCTACAGGCCTTTGCCCGTGGAATGTGAACGCCGTGGACTTTACAAAATGTCTTGGCAAAGTAAATATTCAGCATGTAGAAACTTTTAATGAAGCTAACAAAGAAAATCCAAAAGTGATGACCAAAGAGgactttaagaatattataggAGCAAACAAAATAACTCAAATTGAACTAGATGTAGAAGGACCAGAAGACAAGTATTTGAAAAAAATTTGGGACTTTTTCACGGAAGCGCAAAAGGatacaaatttaaacaaaaacaatacttCCAGGCAACAAGATGTGGAAATGACATTTAATGCAATGGATATTGAAAACATGCCAGTTATTATAAGCGGAGAATTGAGAGAAGAGCTTTCTAATTGCGCACCTGCACCTGCCTCGGAAGTAATTGTAACAGCAGAAGACTTTGACGATCATTTTTCTGACAATTCACAAGGAGTTTTACATTTAACACATAAAGCAGAAGTGTATGATGGTAAGACTGAAAATACCAGAATTTCTGTTCTGCCCCAACAAACGGAACGCCCCTATACAGTCCCACAACAACAAAGTTTCGATTTTGACAAAATAGAAACTTATATAGATCCAGCACCTATAAGAGTCCAAAAACATACCACTGCCATGTTAAATCTTACTCCCATTAAATTAACGGATATTCTCGTACTGCCTAAATCACCTCAACGAAAAGGCGTTAGAAACATAAAGAGAGCTCCTTTTGTATTGACATCTGATGAATGGAGATCTATAGAGAGCGAAAAACTACGCGTAaaacaagaaaaagaagaaggcaTAAAGAGAAGAAAAGTAGAAAGGGAAAAAAAGAAATTAGAAGCAAAAATTAAACAGACAAAACCAAAGGCACCAGGCACTAAATTGAAAGTTAAGAAAATCCACAAAAGAATGAACACAGATTTAAAGAAACTTGTGCTACCTGAGAAGTTGAATACCGTGGATATCTCCTTAATACCACCCCAAATTGCAAATGTAAACTATACACCGGATGAAAAACAAGAGGAAAAGGAAAATGATACCGACTACGCTAATTTAATACCTGAAAATAAGGATGGAAAACAAAACAAGATATTACACACTGCAGCTGAAATAGAGAAGTTTTTGACTGAATTTGAAGATTAa
- Protein Sequence
- MSKKTPKQIRRRKIYDSENLNKALQAVKEGMSKKLAAKTYQVPRATLQYRIKNPEHQSRPGPPTILTEKEEKDLEDWILLSCRKGFPKRKDDLISSVANFLKNSNRASVFKNGEKWYKLFLQRHPNISVRTPEAVTAASAAVSENDVRAWFNQIEVYLKESDLFNILSDSSRVFNGDETNFLLCPKTGVVLAPKGERNVYEVDNALAKTSLTVMFTFSANGDLTPPMVIFPNKRLSADITSKVPSDWGIGLSDNGWMKAEVFHDYIENVLHTHLIKKGTQFPIILFVDGHKTHLTYAVSELCKKLKIVLIALYPNCTRLLQPADVSAFKPLKSGWQKTVLEWRRNNPSVALTKINFVPLLNKTIKNTITALTVINGFRATGLCPWNVNAVDFTKCLGKVNIQHVETFNEANKENPKVMTKEDFKNIIGANKITQIELDVEGPEDKYLKKIWDFFTEAQKDTNLNKNNTSRQQDVEMTFNAMDIENMPVIISGELREELSNCAPAPASEVIVTAEDFDDHFSDNSQGVLHLTHKAEVYDGKTENTRISVLPQQTERPYTVPQQQSFDFDKIETYIDPAPIRVQKHTTAMLNLTPIKLTDILVLPKSPQRKGVRNIKRAPFVLTSDEWRSIESEKLRVKQEKEEGIKRRKVEREKKKLEAKIKQTKPKAPGTKLKVKKIHKRMNTDLKKLVLPEKLNTVDISLIPPQIANVNYTPDEKQEEKENDTDYANLIPENKDGKQNKILHTAAEIEKFLTEFED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00636289; iTF_01547482; iTF_01547480; iTF_01547481; iTF_00703874; iTF_00703873; iTF_01182776; iTF_01182769; iTF_01182770; iTF_01182771; iTF_01182772; iTF_01182773; iTF_01182774; iTF_01182775; iTF_00373936; iTF_01525944; iTF_00973714; iTF_00373939; iTF_00809057; iTF_00888197; iTF_01264485; iTF_00711785; iTF_00373938;
- 90% Identity
- -
- 80% Identity
- -