Cnup026252.1
Basic Information
- Insect
- Catocala nupta
- Gene Symbol
- E2f4_1
- Assembly
- GCA_963675205.1
- Location
- OY776090.1:22558210-22561828[-]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.7e-29 1.1e-24 87.7 0.4 2 65 10 74 9 74 0.98
Sequence Information
- Coding Sequence
- ATGACGGACTTAAAATACAAACGCTATGAGAAGTCTTTAGGTTTACTCacaacaaaatttgtttcattGCTGCAAAAAGCAAAGGATGGTGTTTTGGATTTGAAAATTGCTACCAATTTGTTAGCTGTAAGACAAAAGAGAAGAATATACGATATTACAAACGTTTTGGAAGGAATTGGTTTAATAGAGAAGAGGAGTAAGAATAGTATACAATGGAAAGGTGCAGGGCCAGATTGTAACACAAGTGATATCGGTGaaaaagtaacagtacttaGGAGACAGGTCAATCGGTTAGATGAACATGAAAGAGTACTTGATAAGCAATTACATTGGATTGAACAGAGTATAAAGAATGTAATGGACGACACAGACAATCAAGATCTCTGCTTTGTGTCAGATAAAGACATACAGGATTGTTTTGAGGAGGATCAAGTTTTAGTATTAGAAGCACCTTTAGGTGCCAATTTATCTGTCGGAACTTTACCCAGTAAGgaCAAAGATCCAcacttttttttacatttgaaaTCAAATGAATCAATTGGAGTTATATTGTTACGTGATAATGAAAGTGAAAAGGAGATGGATGAAGAAAGCATGGAGGACAGTGAAGTTCAGAGTTATACTGAAGACATTTGTGATACTAGTTTACAGTCCAACAATTACTTGTTGAGACTCAGCCCGCCTGCCACTAAATACGACTTCTCATTTTCTTTACGTGGAACGGAAGGACTGTGCGATTTATTTGATATACCTTGTTAG
- Protein Sequence
- MTDLKYKRYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSKNSIQWKGAGPDCNTSDIGEKVTVLRRQVNRLDEHERVLDKQLHWIEQSIKNVMDDTDNQDLCFVSDKDIQDCFEEDQVLVLEAPLGANLSVGTLPSKDKDPHFFLHLKSNESIGVILLRDNESEKEMDEESMEDSEVQSYTEDICDTSLQSNNYLLRLSPPATKYDFSFSLRGTEGLCDLFDIPC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00282060; iTF_00794113; iTF_00908605; iTF_00821569; iTF_00931016; iTF_00932211; iTF_01151854; iTF_00404485; iTF_01435852; iTF_00706738; iTF_01501879; iTF_00823718; iTF_00869416; iTF_01173066; iTF_01360401; iTF_00156993; iTF_01197515; iTF_00822680; iTF_00441276; iTF_01075166; iTF_01491670; iTF_00636064; iTF_00637268; iTF_01332336; iTF_01166387; iTF_01179296; iTF_00621813; iTF_01180120; iTF_01425760;
- 90% Identity
- iTF_00282060;
- 80% Identity
- -