Cnig044521.1
Basic Information
- Insect
- Cataglyphis niger
- Gene Symbol
- arid5b
- Assembly
- GCA_004329405.1
- Location
- SJPC01000917.1:32606-43458[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-19 1.2e-15 59.5 0.0 13 89 1 75 1 75 0.95
Sequence Information
- Coding Sequence
- ATGAACTCTCGGGGTACGCCGGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGATCTGTTCCTGTTCTACACGAAGGTGCAAATGCTTGGTGGTTACGATTCTGTCAGTGCCGGCCGTCTTTGGAAAACTATCTACGATGACATCGGCGGCAATACAGGTTCTACGAGCGCGGCGACTATTACACGTAGACATtatgaaaaATTGTTATTACCTTATGAAAGGTATCAGCGAGGTGAAGACACAAAAATAAGACTGAATCACGGACGACGTACTAAAAGTATGAGTGTGTTCGAGGATTCAGATATCAAGGAAGAACCTAGTGATTCGTATCCATCAGAGACATCTCCGCCTATAGAAGCAATTTCCGCGACCACAATATCACCTTTACAGCCAATAATATCAGCAGCAACGACTCTCCTCTCGAATGAGAAACCCAAAACAGAATCTGGCAAGACGTCTTCGTTGCGTAGCGTACGAGTGAAACCGGAACGTTTAAAATCCCTGAACACAATAATCGCTAATAGCGCGACACCTTCCAGCCAGCAAGCTAGCCAACTGCCAAGTCCACCGCCATCCTCCAATACGTCTATTTCGACCCCGAACAGCACACCCTCCACAACTCCGACGAACGGTACCAGTAATAATCAGAGTGTCTTGGAGAGACAGCTCAATAGTCCTTTGATATCCCAACAAGTTCCACCAGCGTGTTCGCCACCGGGCTTGCCCGTAACCAGCGTAGCGACGAATGCATCGGCAGTCGTCACTCTAACACCACCGCCGGAGAAGGATATGAAGGAGATTAAACTGGATCCCAAGCAAACTACTCTACTAGCGCAGGGAAAAGAGAATATACCACTGTTCGGCGGCGAGAAATTTGCTGAGAAGACGATTGTACCGCCAGTCTCTAGATCGCCTGAAGTGATCGATCTCGAGAACGAGAGCGATACCAGTCGAGACAAGATAATCATTCCCAGCTTCAAAAAACGCAAGCTCGAGATTCTCCGCGAGGGTGGTCTCGAGGTCACCGCCGTCGATCTGGATGCGCGGCCGAGCGTAATCCAAAGCAACGTCACTACACCACCGCAACAGACGCCGCCACCGCCGGCCATGAGATTCACCGAGGAGAAACAATCATCGATCTCACCGTATCATCCGATTCCAGCCAACTCCATTCCCAAATTAATATCCGTCACCGTAACGCCCGACATAGGACATATGTTGCCGTCATCGCAGGAGCATCAGAATCATCAGTCGCGAATTCCGGGAGGCAAGCAACAACCGGCtcatcacaataataataataacaacagcacgatgaacaacaacaatgtaataaatagTCGAGTTATAAACCTCGGTAATTCCAACAATGCTATATTGCAGCTATATGCGAACGCGAACGTCGCACCACCGATCTCAGCGACGAATCCGCTTACACAGCAGGCAAATAATCGCTTCGTATCACCAAATGTTCCAAATGGTAGGTTGTTGCCGCCTAAGGTGACACAATCGAGATCAATATTTATGCACAACGAGAGAACAGTTTACGGAAATCCTAAGGATATTCTTATCCCTCCGAAACATCGCTCGTTGCATCCGCATCAACAGTCGCAACAACGCTTGCAATATTCGCAAATGAGCAACGACATCGGACAAGGAAATGTTCTCGATCTTACGCAAAAATCTAATGAGAAACCGTTCCCCAGGCCCAGTTTAGAAATAGTCAGAGTACCTGTAGTGCCGAGGCCTAATCCGTTAAATCTAGAAGTACGGAATTTATCCGCGGCTAAGGACAAATCGACGTTAGACAGATCTTCTGTCGATTGCTCGAAACGAATATCCTTTCCTCCCTATCAGAACGTAATTGACAGTCGAACTATTGCTTCAAATAACCTCGAAATTACTCTCGTAAATCCTaagcagaaaaataatcatcatccaAATACACCGTCTCATGTCCAGATACCGAGTCcacctaataaaaataacgcaATAGGGACGGTCAATAGCGTGCAGAGAAGGCAACAACAGCATCAAGTGAACGGAAAGTATGCAGCGAGAAATGAGCCAATTTCACCATATACGCCGAGAAAACCGAGTCATCCTGTCATACCTAACGTACCCAATTTGAATCATCTAAATCACAGTGGAAATTCATTTCCCAGAATGCAGGCAACGACGATGCAACAGCAACAAATAAGTATTGACAGGAGGAAAGCGATGGCAGAGGCTGGCAGGGATCATCAGCATCGTAGGATCAGCGAAAGTGAGAAGTTATCTTTGGCAgcgcaacaacagcaacagcaagaATCTAGGCAAAGCGAAGCTGGTCGACGACACAGTTTACCCAGCATACCATCGGGTTTTGTACCGGCAGTGCCGCAAAATAATTCTGCCGCATACCCATTGCCACAACTGTCGAACGCGCCCGGCAAATTCCTACCAATATTGGACCCTATGTACTATTCCGCGTTCTATAACGGCTTGTTCCCACCACCGATTCCGCCCACGGCCGCTGCTGCGACATCGTTTCTACCACCGGATATTAGATTTTACAAAGAATTATTAGTTTCCTCGCAACCAAGACTGACGGGGATAACGGGGCAGCCGCCGTATCAGCAACCGGCTGCCCCAACGTCTAAATAG
- Protein Sequence
- MNSRGTPVGKMPLLGYRQIDLFLFYTKVQMLGGYDSVSAGRLWKTIYDDIGGNTGSTSAATITRRHYEKLLLPYERYQRGEDTKIRLNHGRRTKSMSVFEDSDIKEEPSDSYPSETSPPIEAISATTISPLQPIISAATTLLSNEKPKTESGKTSSLRSVRVKPERLKSLNTIIANSATPSSQQASQLPSPPPSSNTSISTPNSTPSTTPTNGTSNNQSVLERQLNSPLISQQVPPACSPPGLPVTSVATNASAVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGGEKFAEKTIVPPVSRSPEVIDLENESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDARPSVIQSNVTTPPQQTPPPPAMRFTEEKQSSISPYHPIPANSIPKLISVTVTPDIGHMLPSSQEHQNHQSRIPGGKQQPAHHNNNNNNSTMNNNNVINSRVINLGNSNNAILQLYANANVAPPISATNPLTQQANNRFVSPNVPNGRLLPPKVTQSRSIFMHNERTVYGNPKDILIPPKHRSLHPHQQSQQRLQYSQMSNDIGQGNVLDLTQKSNEKPFPRPSLEIVRVPVVPRPNPLNLEVRNLSAAKDKSTLDRSSVDCSKRISFPPYQNVIDSRTIASNNLEITLVNPKQKNNHHPNTPSHVQIPSPPNKNNAIGTVNSVQRRQQQHQVNGKYAARNEPISPYTPRKPSHPVIPNVPNLNHLNHSGNSFPRMQATTMQQQQISIDRRKAMAEAGRDHQHRRISESEKLSLAAQQQQQQESRQSEAGRRHSLPSIPSGFVPAVPQNNSAAYPLPQLSNAPGKFLPILDPMYYSAFYNGLFPPPIPPTAAAATSFLPPDIRFYKELLVSSQPRLTGITGQPPYQQPAAPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00279753;
- 90% Identity
- iTF_00279753;
- 80% Identity
- -