Basic Information

Gene Symbol
ARID5B
Assembly
GCA_004195275.1
Location
SGAY01001015.1:9176-13564[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.8e-24 3.4e-20 73.0 0.0 1 89 86 172 86 172 0.95

Sequence Information

Coding Sequence
ATGGCCATCGTAATGAGAATTCGGAATAATCAAGTAGTTTATCTGAATATACCCGCACCAAAATTAAAGGGGAGACCACGGCGAAAACGTAAAAAGCGTAGCGTTTCGCCGGGCGAGTCTTCGAACGAGAGCGAAGCCTCGGTGGCGTCGACGTCGAGGAGCACACCGGCGAATACCGGCACTAGCCTAGTTATACCCACAGTCGGGAGGCCATCTTCTTCTGCGGTACGGCGGAGTGAGAGGAAGACCACCGCGGAGGAAAAGAAGTTTATCACCGACGTGAAGAATTTTATGAACTCTCGGGGTACGCCGGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGATCTGTTCCTGTTCTACACGAAGGTGCAAATGCTTGGTGGTTACGATTCTGTCAGTGCCGGCCGTCTTTGGAAAACTATCTACGACGACATCGGCGGCAATACAGGTTCTACGAGCGCGGCGACTATTACACGTAGACAttatgaaaaATTGTTATTACCTTATGAAAGGTATCAGCGAGGTGAAGACACAAAAATAAGACTGAATCACGGACGACGTACTAAAAGTATGAGTGTATTCGGGGATTCAGATATCAAGGAAGAACCTAGTGATTCGTATCCATCAGAGACATCTCCGCCTATAGAAGCAATTTCCGCGACCACAATATCACCTTTACAGCCAATAATATCAGCAGCAACGACTCTCCTCTCGAATGAGAAACCCAAAACAGAATCTGGCAAGACGTCTTCGTTGCGTAGCGTACGAGTGAAACCGGAACGTTTAAAATCCCTGAACACAATAATCGCCAATAGCGCGACACCTTCCAGCCAGCAAGCTAGCCAACTGCCAAGTCCACCGCCATCCTCCAATACGTCTATTTCGACCCCGAACAGCACACCCTCCACAACTCCGACGAACGGTACCAGTAATAACCAGAGTGTCTTGGAGAGACAGCTCAATAGTCCTTTGATATCCCAACAAGTTCCACCAGCGTGTTCGCCACCGGGCTTGCCCGTGACCAGCGTAGCGACGAATGCATCGGCAGTCGTCACTCTAACACCACCGCCGGAGAAGGATATGAAGGAGATTAAACTGGATCCCAAGCAAACTACTCTACTAGCGCAGGGAAAAGAGAATATACCACTGTTCGGCGGCGAGAAATTTGCTGAGAAGACGATTGTACCGCCAGTCTCTAGATCGCCTGAGGTGATCGATCTCGAGAACGAGAGCGATACCAGTCGGGACAAGATAATCATTCCCAGCTTCAAAAAACGCAAGCTCGAGATTCTCCGCGAGGGTGGTCTCGAGGTCACCGCCGTCGATCTGGATGCGCGGCCGAGCGTAATCCAAAGCAACGTCACTACACCACCGCAACAGACGCCGCCACCGCCGGCCATGAGATTCACCGAGGAGAAACAACCATCAATCTCACCGTATCATCCGATTCCGGCCAACTCCATTCCCAAATTAATATCCGTCACCGTAACGCCCGACATAGGACATATGTTGCCATCATCGCAGGAGCATCAGAATCATCAGTCGCGAATTCCGGTAGGCAAGCAACAACCGGCTcatcacaataataataataacagtacGATGAACAacaacaatgtaataaatagtCGAGTTATAAACCTCGGTAATTCCAACAATGCTATATTGCAGCTATATGCGAACGCGAACGTCGCACCACCGATCTCAGCGACGAATCCGCTTGCACAGCAGGCAAATAATCGCTTCGTATCACCAAACGTTCCAAATGGTAGGTTGCTGCCTCCTAAGGTGACACAAtcgaaatcaatatttatgcacAACGAGAGAACAGTTTACGGAAATCCTAAGGATATTCTTATCTCTCCGAAACATCGCTCGTTGCATCCGCATCAACAGTCGCAACAACGCTTGCAATACTCGCAAATGAGCAACGACATCGGACAAGGAAATGTTCTCGATCTTACGCAAAAATCCAATGAGAAACCGTTCCCCAGGCCCAGTTTAGAAATAGTCAGAGTACCTGTAGTGCCGAGGCCTAATCCGTTAAATCTGGAAGTACGGAATTTATCCGCGGCTAAGGACAAATCGACGTTAGACAGATCTTCTGTCGATTGCTCGAAACGAATATCCTTTCCTCCCTATCAGAACGTAATTGACAGTCGAACTATTGCTTCAAACAACCTCGAAATTACTCTCGTAAATCCCAAGCagaaaaataatcatcatCCAAATACACCGTCTCATGTCCAGATACCGAGTCCacctaataaaaataacgcaaTAGGGACGGTCAATAGCGTGCAGAGAAGGCAACAACAGCATCAAGTGAATGGAAAGTATGCAGCGAGAAATGAGCCAATTTCACCATATACGCCGAGAAAACCGAGTCATCCCGTCATACCTAACGTACCCAATTTGAATCATCTAAATCACAGTGGAAATCCATTTCCCAGAATGCAGGCAACGACGATGCAACAGCAACAAATAAGTATTGATAGGAGGAAAGCGATGGCAGAGGCTGGCAGGGATCATCAGCATCGTAGGATCAGCGAGAGTGAGAAGTTGTCTTTGGCAGCgcaacaacagcaacagcaagAATCTAGGCAAAGCGAAGCTGGTCGACGACACAGTTTACCCAGCATACCATCGGGTTTTGTACCGGCAGTGCCGCAAAATAATTCTGCCGCATTCCCGTTGCCACAACTGTCGAACGCGCCCGGCAAATTCCTACCAATATTGGACCCTATGTACTATTCCGCGTTCTATAACGGCTTGTTCCCACCACCGATTCCGCCCACGGCCGCTGCTGCGACATCGTTTCTACCACCGGATATTAGattttacaaagaattatTAGTTTCCTCGCAACCAAGACTGACGGGGATAACGGGGCAGCCGCCGTATCAGCAACCGGCTGCCCCAACGTCTAAATAG
Protein Sequence
MAIVMRIRNNQVVYLNIPAPKLKGRPRRKRKKRSVSPGESSNESEASVASTSRSTPANTGTSLVIPTVGRPSSSAVRRSERKTTAEEKKFITDVKNFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQMLGGYDSVSAGRLWKTIYDDIGGNTGSTSAATITRRHYEKLLLPYERYQRGEDTKIRLNHGRRTKSMSVFGDSDIKEEPSDSYPSETSPPIEAISATTISPLQPIISAATTLLSNEKPKTESGKTSSLRSVRVKPERLKSLNTIIANSATPSSQQASQLPSPPPSSNTSISTPNSTPSTTPTNGTSNNQSVLERQLNSPLISQQVPPACSPPGLPVTSVATNASAVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGGEKFAEKTIVPPVSRSPEVIDLENESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDARPSVIQSNVTTPPQQTPPPPAMRFTEEKQPSISPYHPIPANSIPKLISVTVTPDIGHMLPSSQEHQNHQSRIPVGKQQPAHHNNNNNSTMNNNNVINSRVINLGNSNNAILQLYANANVAPPISATNPLAQQANNRFVSPNVPNGRLLPPKVTQSKSIFMHNERTVYGNPKDILISPKHRSLHPHQQSQQRLQYSQMSNDIGQGNVLDLTQKSNEKPFPRPSLEIVRVPVVPRPNPLNLEVRNLSAAKDKSTLDRSSVDCSKRISFPPYQNVIDSRTIASNNLEITLVNPKQKNNHHPNTPSHVQIPSPPNKNNAIGTVNSVQRRQQQHQVNGKYAARNEPISPYTPRKPSHPVIPNVPNLNHLNHSGNPFPRMQATTMQQQQISIDRRKAMAEAGRDHQHRRISESEKLSLAAQQQQQQESRQSEAGRRHSLPSIPSGFVPAVPQNNSAAFPLPQLSNAPGKFLPILDPMYYSAFYNGLFPPPIPPTAAAATSFLPPDIRFYKELLVSSQPRLTGITGQPPYQQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00280444;
90% Identity
iTF_00280444;
80% Identity
-