Chis002149.1
Basic Information
- Insect
- Cataglyphis hispanica
- Gene Symbol
- Gcfc2
- Assembly
- GCA_004195275.1
- Location
- SGAY01020960.1:1-1645[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-23 1.7e-19 71.2 0.9 2 189 125 275 124 277 0.94
Sequence Information
- Coding Sequence
- CTTCCTCTGGTTATTGAGTTGGAGCGACGCTGGTTAGATCTGTATGGCGAACGCTCGACCGAATTGATGGAACGGAGACGACAGGATACGAGAGATCAGGCAGAAGAAATAACTGCAGCAAaaGGTCAAACTATGAGAAGAGGACCAGAAGTAGAAGCTCATGTACGACGAGCCACAGAGAGAGAAGGTAGGAGAGCCCGTCGTAGAAGAGCGAGAGAATTAGCTTCAAATATGCCAAAACATATCGATGGCATGTCTAGTGATGATGAAGTTACTGAGCAACAAAATCTCGCATTTAAACAAGCAAAAgatgaaattgataatgattgtaaaaatatattttctgatgtCATGGAAGAATATTGTACAGTACGTGGTATACTTTCAAAGTTCGAATTGTGGAGAGAGACAGATATAGACGCGTATACAGAAGCTTATGTATCGTTATGTATAcccaaaattatttctccaaTTATCAGATTACAATTAGTTAGCTGGAATCCAATTatgGAAAGCGCTGACATAGAGAGGACAAAATGGTACAATTCATTGCTTCTATACGCTTTAGATAGCAAAGAGACGGAGGAATCGTTGAAACGAGATCCGGATGTTAGATTAATACCATTCACAATTGAAAAGATTGTAATTCCAAAATTGACATctaTTATCGAAAAGATATGGGATCCAATGTCGACATCTCAAACTTTACGTCTTGTAGGAGCTATAAATCGTCTCATCAAGGAATACCCGAATTTAAATGACACGAGCAAACAATtggaaattctatttaatgctattttagataaaattaaggCTGCTGTTGAGAACGATGTT
- Protein Sequence
- LPLVIELERRWLDLYGERSTELMERRRQDTRDQAEEITAAKGQTMRRGPEVEAHVRRATEREGRRARRRRARELASNMPKHIDGMSSDDEVTEQQNLAFKQAKDEIDNDCKNIFSDVMEEYCTVRGILSKFELWRETDIDAYTEAYVSLCIPKIISPIIRLQLVSWNPIMESADIERTKWYNSLLLYALDSKETEESLKRDPDVRLIPFTIEKIVIPKLTSIIEKIWDPMSTSQTLRLVGAINRLIKEYPNLNDTSKQLEILFNAILDKIKAAVENDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01408209;
- 90% Identity
- -
- 80% Identity
- -