Chis019715.1
Basic Information
- Insect
- Cataglyphis hispanica
- Gene Symbol
- Rel
- Assembly
- GCA_004195275.1
- Location
- SGAY01001858.1:193-5452[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-44 2.9e-40 138.7 0.3 1 168 89 278 89 279 0.91 2 2 0.8 8.1e+03 -2.6 0.0 67 112 779 823 768 843 0.68
Sequence Information
- Coding Sequence
- ATGCCAGATGCGTATGAGAACTTTAACATGGCGATGCGGAGTATATTGACGACCAGTGATATGGATAATGAGGTGGACCCCTCGTACTTTCCATTTAACGATTTGACATTGATAGAGAGTACAAGTGGTCTAAGCCCATACAGTGAGTCTCAGGGGAATATGAGCATCACTTCACCCATGTCAACAACTTCATCACCTATGCATATTACagacaattatattactttatccAATGCTACAGtACAAGTACTTGGCGAACCATACATTAGCATCTTAGTGCAACCAATGGATAAATTTAGATTTCGATATAGATCTGAAATGGTAGGGACACATGGGAGTTTATTGGGTGTATCAAATGGACGtagacgaaataaaaataatgtaccaACAGTCCaattacataattatttggaTAAAGCAATAATACGATGCACATTGGTTACAACAGATGACGAACACATACCACACGCTCATAGATTAGTGAAGCGTATGGGTGCTACAGATATGGATGATCCACATGATATAGAAGTTTCACCTACAAACGATTTTATAGCTGAATTCAATAGCATGGGAATAATACATActgcaagaaaaaatatcaaagaagaaATAGTACGAAAATTACGTGCAAAAATTTTAGAGGAACGCAGACGTTCAAATATTAATGCTACTCTTAGCCTTCGCGATGATGCACAGATTAAAGCTGATGCAGAACATTATCAAAagactataaatttaaatactgtCACCCTTTGTTTTCAAGGTTTTATCAAAGATGAACATAATGTCATGAGACCAATTACAGCGCCGGTTTATAGTAATCCAATCAATAATCTAAaaagcgCATTAACTGGGGAGCTTAAAATATGCAGAATTGATAAGTATACCAGCAACTGTGAAGGTGGAGAAGAAGTATTCATACTTGTAGAGAAAGTTTCTAAAAaaaatataaaaataaagttttttgaaCTAAACGACGATGACATTGAGATCTGGACTGATTATGGTCGATTCTCGGAATTAGATGTCCATCATCAATATGCCATGGTATTTCGAACTCCACCATACAAGGATCTGTATATTACTTCTCCAAGAGAAGTTTTCATACAATTGGAACGTCCTTCAGATTCAGATTGTTCAGAACCAATTAAATTCACATATAAGCCCAGTGATCGTATGATAGGTAGAAAGAGAACGCGAGTTTCTTATTCGAATAGCGGGGAATTGGCACAAATGGCGTTCAATCCAGATACGCCGTTAATGAATACACCGCTAACGAATGTATCTTCAAGCAATGAAAGTACTgaaatttctaaagaaataaaaaagatgttagATGATAGATGCTCTTCCAGCGAGTTCAAGGATTTTGTTGAACACATAAATTTAGAGTtgTATGAGAGtttattaaatgaagaaaataaattaacttatgATGGAGCACCAAGCAAAaagGATGATGAAATgtttgctaaaaatattattatcgaaacAATAAATAGTATCAAAGCAAACCCAAATAAATCTaaggatattataataaatatgttcaaaAACAGGACAACTTATGGTGATTCACCGCTACATTATGCACTCCGATATGggcaaaaagatattataaaacgtaTCTTAATGTTTATGAGTGTACTAAAGACAGATGCTGAAGAGTTAGTGAATATTCAAAATAGTTCTGGCAAgACTCCATTGCATTACGCTGTTTCACAAGAACATGCAGAGATTACAAAAGCATTGCTTATGCTTGGTGCAGATCCAAATATATCAGACCATTATGGACAAATGCCATTGCACAGAGCTGTTAAATTTCCAGAAGCAAAAGCAAGTATTGATGTTTTATTGAGTGaagaaaaaatcaacattGAAGCAAATACAGATTTGGGATGGACACCTTTGCAATTAGCTGCTGAGGCGGGCTCATACTATGCAGTACGCTCTCTCATTAAAGCGGgtgcaaatgtaaataatactgATATGTCTTATGGAAGAACTGCTTTACATATAGCGGTCGAAGGAGGTCACAAAGATATAGTGGAATTCctgttaaaaaatACCAAAATAGACGTTAATAAGAGAAACTTCAGTGGAAATACAGCATTACATACTGCGGTAGTTACGCCTGgaataaaagcaaaagaaatatgtGTTCTTCTATTGAAATATGGCGCTAATCCTCATATAAGGAATTTTAATCGTGAACCAAGCAAcATTGAAGGGGAAcaagtacaaaatataaaaactgaaataCAGTCAGATGATGAAAACATGAAAGAATCCGTCGGGCAATCATCTTTCGACTTAGCCTCAAACAAACCAGATATCTTACAGCTTGTTTCCAATCAATGTGATGCATCATTAGaaacaattaaatgtaaagaagaaaatatcgatGATACACAAAAAGTTTGGATGGATGCAGTCCAGGAAAAACAATTAGCAGCTATCCTAGATGAGACAAAAGGATGGAAAAAATTAGCCcgtcatttaaattttgaaaatttatttaatacgttTGAAGAGAGTTCAACCAGTTCAACATTACTCCTCTTGAATTACATTGCTATACAAACTAGTATTTCTCTTAGTGAGCTGCAAAATATACTGCAGAGCATAAATGAAGAAGATGCTGCTGTATATATGGGACAAGTTTTATCTATACATGAAAATACAACGAGTCACACACTTTTAAAATga
- Protein Sequence
- MPDAYENFNMAMRSILTTSDMDNEVDPSYFPFNDLTLIESTSGLSPYSESQGNMSITSPMSTTSSPMHITDNYITLSNATVQVLGEPYISILVQPMDKFRFRYRSEMVGTHGSLLGVSNGRRRNKNNVPTVQLHNYLDKAIIRCTLVTTDDEHIPHAHRLVKRMGATDMDDPHDIEVSPTNDFIAEFNSMGIIHTARKNIKEEIVRKLRAKILEERRRSNINATLSLRDDAQIKADAEHYQKTINLNTVTLCFQGFIKDEHNVMRPITAPVYSNPINNLKSALTGELKICRIDKYTSNCEGGEEVFILVEKVSKKNIKIKFFELNDDDIEIWTDYGRFSELDVHHQYAMVFRTPPYKDLYITSPREVFIQLERPSDSDCSEPIKFTYKPSDRMIGRKRTRVSYSNSGELAQMAFNPDTPLMNTPLTNVSSSNESTEISKEIKKMLDDRCSSSEFKDFVEHINLELYESLLNEENKLTYDGAPSKKDDEMFAKNIIIETINSIKANPNKSKDIIINMFKNRTTYGDSPLHYALRYGQKDIIKRILMFMSVLKTDAEELVNIQNSSGKTPLHYAVSQEHAEITKALLMLGADPNISDHYGQMPLHRAVKFPEAKASIDVLLSEEKINIEANTDLGWTPLQLAAEAGSYYAVRSLIKAGANVNNTDMSYGRTALHIAVEGGHKDIVEFLLKNTKIDVNKRNFSGNTALHTAVVTPGIKAKEICVLLLKYGANPHIRNFNREPSNIEGEQVQNIKTEIQSDDENMKESVGQSSFDLASNKPDILQLVSNQCDASLETIKCKEENIDDTQKVWMDAVQEKQLAAILDETKGWKKLARHLNFENLFNTFEESSTSSTLLLLNYIAIQTSISLSELQNILQSINEEDAAVYMGQVLSIHENTTSHTLLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01077246;
- 90% Identity
- iTF_00729840;
- 80% Identity
- -