Cbif011671.1
Basic Information
- Insect
- Cartodere bifasciata
- Gene Symbol
- dsx_3
- Assembly
- GCA_963920755.1
- Location
- OY987197.1:17924597-17931406[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-20 4e-17 62.0 14.8 2 47 6 51 5 51 0.98 2 2 0.34 1.4e+03 -0.6 2.7 28 39 169 180 166 184 0.75
Sequence Information
- Coding Sequence
- ATGGACCCAAGAACACCTCCAAACTGCGCCCGGTGCCGAAACCATTATATTACAATCGCACTTATAGGACACAAACGCTACTGCAAGTACCGCGCATGCAAGTGCCAGAAGTGCTGCCTCACGTCGGAACGTCAACACGCCATGGCCAAGCAGACGGCTCTCCGGAGAGCCCAAACCCAGGACAGGCATATGATTCGAACGGAAGTTCAAATAGATGGATTCCAAATAGAACGGCAACCTTCTAATGAAGCAGTACCAGTAGCACCAGTGGTACATCTATTAGCAGATGTAGTAGTCCCTGCAGAAGTTGAAATAGATAATTTCCAAATAGAACGGCAATCTTCTAATAAAGCAGTACCAGTAGCACCAGTGGTACATCTAGCAGATGAATTAGACCCTGCAGaaatcATACACGAAGACATTCTTGCTGGTGCGGCCGGAAAGGATGAATGTGTCATTTGTCTGGAAGGGCCCAAATTAATCGTCGCAGTACCCTGTGGACACAGATGCTTCTGTACGAGATGTGGGCCAACAGCTCAGGAACAGTTTCAATTATGTCCATTTTGCAGAGCTGATATTAACTCGTTTCTTAGGATTTATTAA
- Protein Sequence
- MDPRTPPNCARCRNHYITIALIGHKRYCKYRACKCQKCCLTSERQHAMAKQTALRRAQTQDRHMIRTEVQIDGFQIERQPSNEAVPVAPVVHLLADVVVPAEVEIDNFQIERQSSNKAVPVAPVVHLADELDPAEIIHEDILAGAAGKDECVICLEGPKLIVAVPCGHRCFCTRCGPTAQEQFQLCPFCRADINSFLRIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -