Cbif008064.1
Basic Information
- Insect
- Cartodere bifasciata
- Gene Symbol
- dmd-4_1
- Assembly
- GCA_963920755.1
- Location
- OY987196.1:5141920-5148090[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-24 3.2e-20 71.9 10.0 1 47 457 503 457 503 0.98 2 2 0.11 4.3e+02 1.0 0.7 29 36 686 693 684 699 0.82
Sequence Information
- Coding Sequence
- ATGCCGAAAAAGCATAtcccaaaatttcaaaaattcgtTGAGCTTTTTCTGTCTGAAAGTCAAATTCATGGTTTTGCACATCTCGGCCAAAAACAAAACGGTTTACCAATGCAAATTTTATGGTTGTGTATTATAATTGCTGCAGTTTATGGAGCACTACGATTAAGCCTTATGACGGTTGAGCGATATACAGAAAACCCAACTGTTATTTCCATGGAAAGGGACAAATTTTCGTGGAACACCTCATTTCCATCGACGACAATTTGTccaaaatttaagttagaagAGAGATTACTTGAGGCATATGTGCAAAACTCGACTGCAGAAAACAAAACTCTTTTCAAGGAGTTTTTGGTAACTTTAGCCGAAGCCAGTTACGATAATTTTGAAAGAATTGTTCCGTACGATAATGGTTTGACTGGTGATGATTTTCTggaaattataataaaacttaagTTTGATTTTAAACCTTCGATCACCAATTCAGCACTTGAGAACAACACCTATGGTTTAGAGGAAGTAATATCAGAAATGGGAATATGCTATAGTTTCAATTCACAACTTGCGAGATACAACGCACCCAgttattggAGCCAAGGTTCCTGGGAATTATTCAAAGAAACGCAAGTCTTTTACGTTAACCCTTTGGATGGCGAAATTTTTGCGAATTTAATCAACATGTCGACAGGTTTTAATATTTACATCCATGGTCCCTTTGAAGTCGCCGACATAGCAAGCAAAAACATCGACTCCCCAAACGGTTACTTCTTACAACTGTTCTTAAACGGCCTTACCATATTTAGCGACGAAAAAATCAAGTCGCTTAGCGTCAACCAAAGAAAATGCAGGTTTTACTACGAAAGTGACCTGAGGCATTCACCTGTTTATTCTTATGTTTTGTGCCGTATGGAATGTAGAGCAAAGTTGGCACAAAAGTTATGCGGTTGTATTCCACATTTCTACAGAAAACTTGATGGTCTAAAGTATTGCAACCTAAGTGGACTTTATTGTTTATCAAAGCACAAAGaaagattaatcattttaaaaggggaaTGCTCATGTCTACCAAATTGCGACGAAGTAAACTACATTATTGAATGGTTAGACACGAGGCAGTGGTTTTTGGGGTCTAATTTACAATGGGGGCTCAAGGAATACCCCAAAATGAGACTTAGGCGCGAtgttatttttggttttactGAACTTTTAGTCTACATAGGAGGCATGGTGGGGTTGTTTCTAGGCTGCAGCGTTTTGAGCTTTATTGAAATCGTATATTTCTTCACATTGAGGTTGTATTGGTTTTTTAGAAGCAGTAGAAGTGTCAGTCATAAAatgCTGTTAAATTCTCGGTCATCCTCTTCAGCCCGTGTTCCAAAATGCGCCAGATGCAGAAACCATGGAATGATTTCAACTTTACGCGGACATAAAAAACAGTGTATTTACAAAACTTGCTCTTGCATTAAATGTGGACTAATTAAAGAACGACAAAGAATCATGGCGGCTCAGGTAGCATTAAAACGACAGCAAGCCGCAGAAGACGCCATCGCTCTACATCTCGCGTCCGCAGAATCCGGCACCACTTACGACTACCTTCCCCCAGGTCGTATCTTCGGCATGCAAGTCACAGAACCCGAAACAGATCCCCAAGAACCCCCCTCCAATCCCAGTGCCAAAACCACAGAACCCGACAACACAGAACCAATCCAAGTGAGCCCCGCGTCTGTAGAAATGCTTAGCAAATTGTTCCCTACCAAAAAACGCACGGTTTTGGAGCTGGTTCTCAAAAGATGTAACCATGATTTACTCAAAGCCATAGAGCACTTCAATGTTGGTTCACCGGAAGTTAAACCTGAAGATGTTGTGGCTAAGAGCGAAACGTCGGCATTTAAGCCAGTTGGGGGTGGTAAACAAGGGAAGGTTTTTATGCCACATCAAAGTTCTTTGCCGTTGATTTCTAGCAATAAGGTTTTTATGCATAATTTGTATCCGTTTTTGCCGCTTTTTAATCCGCAGCCTGTTTTACCCAGTTCGGCAGTTTACGTACCTGGATTTTGTGATTGCGAACAatgcaaacataatttgtaTCGATTGGAAAACTCGTCTTGA
- Protein Sequence
- MPKKHIPKFQKFVELFLSESQIHGFAHLGQKQNGLPMQILWLCIIIAAVYGALRLSLMTVERYTENPTVISMERDKFSWNTSFPSTTICPKFKLEERLLEAYVQNSTAENKTLFKEFLVTLAEASYDNFERIVPYDNGLTGDDFLEIIIKLKFDFKPSITNSALENNTYGLEEVISEMGICYSFNSQLARYNAPSYWSQGSWELFKETQVFYVNPLDGEIFANLINMSTGFNIYIHGPFEVADIASKNIDSPNGYFLQLFLNGLTIFSDEKIKSLSVNQRKCRFYYESDLRHSPVYSYVLCRMECRAKLAQKLCGCIPHFYRKLDGLKYCNLSGLYCLSKHKERLIILKGECSCLPNCDEVNYIIEWLDTRQWFLGSNLQWGLKEYPKMRLRRDVIFGFTELLVYIGGMVGLFLGCSVLSFIEIVYFFTLRLYWFFRSSRSVSHKMLLNSRSSSSARVPKCARCRNHGMISTLRGHKKQCIYKTCSCIKCGLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTTYDYLPPGRIFGMQVTEPETDPQEPPSNPSAKTTEPDNTEPIQVSPASVEMLSKLFPTKKRTVLELVLKRCNHDLLKAIEHFNVGSPEVKPEDVVAKSETSAFKPVGGGKQGKVFMPHQSSLPLISSNKVFMHNLYPFLPLFNPQPVLPSSAVYVPGFCDCEQCKHNLYRLENSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -