Cbif015604.1
Basic Information
- Insect
- Cartodere bifasciata
- Gene Symbol
- lilli_1
- Assembly
- GCA_963920755.1
- Location
- OY987200.1:3085336-3101826[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 4e-13 8.1e-09 35.4 0.2 4 130 23 157 21 199 0.64 2 6 1.7e-07 0.0033 16.9 22.5 349 499 249 404 235 420 0.51 3 6 1 2e+04 -7.4 19.9 111 258 411 552 398 574 0.30 4 6 1 2e+04 -14.5 27.3 81 246 548 713 537 730 0.34 5 6 0.44 8.8e+03 -4.3 29.9 380 496 708 822 703 838 0.61 6 6 1 2e+04 -6.6 32.1 76 242 954 1114 936 1141 0.36
Sequence Information
- Coding Sequence
- ATGCCTGATAGTCGATTTGTTGACATACGTTATAACCCAGCGACGAGATTGGAACATGGAAGCGTGGAAAGAGATCGCCTGCGCGAGCGGGAAAGGCAGGCCAGGGCCCAAATGTCATCACAGGTGGCCGAACAGGAGGAAGGACCTGTCGTCGGCATGCCCCTTTTTGGGGTACCTGTCAAGGTAAACCCTGCGGCCGCTGACCCAGTTACCcttcaaattcaaaataagTTAGGTGACTTTCAACGTGTGAAACCATTTCTGGAACATCAGCAACAACATAAGAATGTTATTGGGGTCGATTGTATACCCCCTAGTCCTGGGGGGCCACCCCCACAGAGGCATTCAACCAGTGCTTTTGGAAGCAACTCCagAATTCCCGGGCCTCCGCCAGATCAGGCGCGAAGCAATGAATTCAAAAAGCCCCAGCAATCTCACCCTTCCAGCAGCTATACTAACCATCATGGGGGCCATCAGCAGCGAGGGGGCTACGTAAAACCGGCCGACGGCAAACCCCCCTACGAAGGTCGAGGGGGCTACCCAGGTCAGCCGGGAAAGCATGGAACCGGTCAAACAAGTCACAGATCACAGGGCATACGTCCCACCAAAGGTCCACCTTTGCAGTcgcccccttttggggccCCACCGCCCAATAGACCTTTGATTGGAGGTCCAAGGGGCCACGGCTATGAACAGGGCCAATCTAGTGAAATTCTCCCATGTCAAACGCCGAATCCTTCGGAAATGGACGTcatttttaagGAAATGATTGACGTTCGACCCAGAGTGACAGCTATTGCAGCGACACCTAGGACCGAATTAGACAATAAATATACATTTAACCCAGTACTATCTAAGCTAACTGAAACCCCCTTGGCACCTCTGATGTCCCCTCCAAAAAaaTGTGAAAGACAGCCAACGTCTAGACCTTCCACTGATCTGAGAGATGACCTAAATCTTTCAGACGAAAGTGAAGATGACAAACATTCTCCTAGTAAAATTTCAACAGTAGAAAGAATGCTATCACCTCTTGGGGCAACTCCGGCTCCTAACCGATCCTCAGTGTCTTCGATGCAATTAGATCCGCCGCTAGAGCCGATTATGTCACCGGTTGTTAGCTCTTCTTCGTCTTCCGATTCTGGGAGCGATTCTGAATCCAGTAGTGACGATTCTGAGAACGAGAGTGCGCCACCGACCAAAGCTAAAACCCCTCCAGTTATTCAGCAACGGCCGCCTTCTCCACCTCCTCCAAGCGAGGACACCTCCAAACCTGAGGAAGAAAGCAAAAAGAGGTGGAACTTGGCAAGCTACATTGTTCCTGACGGAAGCAAATCCGAAACTTCGCCACCACCGAAGCCTAATCAAACACCAACAAATCAAAATCGTAAATCAAACTCGGACGCTCGCAAAAAACTCATTGAGGAATCCGACACCAGCGATTCCACAAAAGATCTAGACATCGTCATGGCAGAGGCTCTCGTCAACACGAAGCCTCCTCCCGTGCTCTCCAGCTTTTCCTCGGACTCGGACGACGAGCCCCCCAAATCCTCCAAACACAACGAAATAGTAAAGCGACACTCTGACTTTAGTGAGGATAGTGATAATATAGACCAACGTAGTAAAATAGTGAAACCGGCAATACGCGTAACGGCACGGACTAAATCGCAATCATCACTCAGTGACTCGGACAGCGAGCCCAGTAAACCTAAAGTGAACAATTTTGTACGGACAGTTGTGCCACCTGTAAATAGTAGAGTTATTAATAAACAGTCGCCGCAGAAAGCTGGTCGCGGGCGACCTAGGAAAATTAAACCCAATGGTTCTGATGGAGAAAATACGACGGTTAAGAAACGAGGTCGACCACCAAAGAATCGCCGGTCGTCCAGCGCTTCGGACAATGAGGTTCAAGTTAAAAAGCGGGGTAGACCGAAAAAACGGGTTTCGCCCTGTCCTTCAAGTTCCGAGGACGAGTTTGAAAAGCCTTCACCACCAACAAGACGACGGACAACGTCGACAAAACGATCCGTACCTAGTTCTGACTCTGAAGACGATATCTACTCTCCAAGTAAGAAACACCAATCTAAAGATTTGGACCGTGATAACATGGTCAAATCTGAATCAACACCAACCAAAAAACACCACAAGAAAACACCACGTTCGGAAGAACGAAAGAAAATATCTTCCAAGACCGACAGCGACGAAGAATGGGGCGCAAAAAACAAGACCAaacttaaaaatcattttgatgTAGTGGATACCAAGCACAAATCAAAGGAGTCACCGAAGAAAAAGGAAACCGCGGCTTCCTTCCGTCGGAAACGCCTTTCAGTAACGAAGAGCGCAGCACCAAAGCCGTATTCTTCGAGTGATTCATCTAGCGACTCTGAACGCGCACCTAGTAACTCAAGACTGCACTCGGACTCTTCGTCCGACAGCGAGATTGAGAAAAACAAGCGAAAGCGAACGAAAAGTACAAGCAGCGATATTGTCAAGCCTAAAGAGCCACAAAAGGTAGAAGGCCCTAGCTCTATCCAAGACAAGAAGAAAAGCGACACGCTACGCaagttgttcacccccaaacGGGACTCTGATGGTGGAAAAGGCGGCGGAAAGGGCGGTGCGAAGGGTGGCAAAGGAAAGTGCGGCGTCAGCGTGATAATCAAGGATGGTGACCACGAAAGAAGTAGTTCCCCAATTGAAGACGAGGCAATGCCCCGCGTTACAAACCCAGTGCTGTTGTCCCCCCTCCCGGTTAAAAAGCAGCGCATTAAATCACACTCCCCGTCTCCCTTACCTTCCAAATCAATTAAGAACGAATCAAAGACTGAATCTTCGCCGTATGAAGAATCATCATCGGTACCTATTTCTCTAGTGGTGAAAATAAGCTTGGAGAAGTTCAATTATCTAGACATACCTAGTGTCAAACGAAGAATGGAAGGAATGCGGCACCATTTGCTGGCCAAGGTTGAGGAAGCCAAGGTGCTCAAAGTTGAAAAATCTCACAAAAGCAAATCGGAATCAAAAAGTAAATCAAAGAAGCGGAAGCGAAAAAATAGCGGCAGCTCCATTTCGTCCCAATCCACCACTGTAAGCAACATGTCGCACAGCAGCAAAAGTACGGAACACAATCAAAGTCATCGACCAAACAAAGAGCATAAACATAGGACAAAAAAACGACGAGATGAAGAAAATGTTCCCAGATCTCACTCAACTGAAAACCTTAGTTTCGCCAATGTTCCTCCAACGAACCATGAGCGGAAAGGGTCGGAACGCGAGGACCGGACTAAGCCCTCAAGTTCTCGGGAGTACCATTCTGCAGGGGAACAACCTACAAGTAATGAGAGATTCCAATACGAGGAGCGTGACCAAAATCAATACCTGGCTGATGCGAAGCGCCTTAAACATATGGCTGATCGAGAGCCAGACCCCATAAAGCAATGTATGTTGTACCTGGAAGCcgttttgtactttttactaACGGGTAATGCGATGGAAAATGAAAGCGTTACAGAAAAAGCTGCCTTTACAATGTACAAAGATACTCTTAGTTTAATAAAATATATTTCGTCGAAATTCAGGCAGCAACCTTATGATGTCTCATCAGTGCACAATAAATTGGCTGTTTTAAGTTACCGGTGCCAAGCGTCGCTGTATTTTAAACTACTCAAAATGAAACTAAAGGAGGCCAAGGACCTTCAAAAGCTCATCAGTGATTTTTGTTCAAAGAATACGTCGATCCCAGTGGAACAGCCAATAGTTCAACCGGGGCAAGGTACGCCGTCCCCTCTGTCTCCGACGCCCTCTCCGGCTGGATCTGTGGGTTCTGTGGGGAGCCAATCATCTGGATACTTAAGCGGGGAGCTTGCTGGGCGCAGTGCGCAAGTTGTGGCGCCCGCAGCCTCGGGGCCCTGCATGTGGGTACCGGTTTCGGTGTACAGTGCAATGGGACGACAAAATCAGACATTTACATACTTATTGTCGGGGTTAGATCTATGGGAATCCGCTGATAATTTGGTGGTGAAAGGCAAACACACCGATTTCTTCGTAGAGTTGGACAAGCATTGTAAGCCTTTAACAATGCATAGCTCGCTTAAAGAATTAGTAATTTACGTACGAGAGGGCATTAACAGGCTAAAGCGAGAAACAAGCTAG
- Protein Sequence
- MPDSRFVDIRYNPATRLEHGSVERDRLRERERQARAQMSSQVAEQEEGPVVGMPLFGVPVKVNPAAADPVTLQIQNKLGDFQRVKPFLEHQQQHKNVIGVDCIPPSPGGPPPQRHSTSAFGSNSRIPGPPPDQARSNEFKKPQQSHPSSSYTNHHGGHQQRGGYVKPADGKPPYEGRGGYPGQPGKHGTGQTSHRSQGIRPTKGPPLQSPPFGAPPPNRPLIGGPRGHGYEQGQSSEILPCQTPNPSEMDVIFKEMIDVRPRVTAIAATPRTELDNKYTFNPVLSKLTETPLAPLMSPPKKCERQPTSRPSTDLRDDLNLSDESEDDKHSPSKISTVERMLSPLGATPAPNRSSVSSMQLDPPLEPIMSPVVSSSSSSDSGSDSESSSDDSENESAPPTKAKTPPVIQQRPPSPPPPSEDTSKPEEESKKRWNLASYIVPDGSKSETSPPPKPNQTPTNQNRKSNSDARKKLIEESDTSDSTKDLDIVMAEALVNTKPPPVLSSFSSDSDDEPPKSSKHNEIVKRHSDFSEDSDNIDQRSKIVKPAIRVTARTKSQSSLSDSDSEPSKPKVNNFVRTVVPPVNSRVINKQSPQKAGRGRPRKIKPNGSDGENTTVKKRGRPPKNRRSSSASDNEVQVKKRGRPKKRVSPCPSSSEDEFEKPSPPTRRRTTSTKRSVPSSDSEDDIYSPSKKHQSKDLDRDNMVKSESTPTKKHHKKTPRSEERKKISSKTDSDEEWGAKNKTKLKNHFDVVDTKHKSKESPKKKETAASFRRKRLSVTKSAAPKPYSSSDSSSDSERAPSNSRLHSDSSSDSEIEKNKRKRTKSTSSDIVKPKEPQKVEGPSSIQDKKKSDTLRKLFTPKRDSDGGKGGGKGGAKGGKGKCGVSVIIKDGDHERSSSPIEDEAMPRVTNPVLLSPLPVKKQRIKSHSPSPLPSKSIKNESKTESSPYEESSSVPISLVVKISLEKFNYLDIPSVKRRMEGMRHHLLAKVEEAKVLKVEKSHKSKSESKSKSKKRKRKNSGSSISSQSTTVSNMSHSSKSTEHNQSHRPNKEHKHRTKKRRDEENVPRSHSTENLSFANVPPTNHERKGSEREDRTKPSSSREYHSAGEQPTSNERFQYEERDQNQYLADAKRLKHMADREPDPIKQCMLYLEAVLYFLLTGNAMENESVTEKAAFTMYKDTLSLIKYISSKFRQQPYDVSSVHNKLAVLSYRCQASLYFKLLKMKLKEAKDLQKLISDFCSKNTSIPVEQPIVQPGQGTPSPLSPTPSPAGSVGSVGSQSSGYLSGELAGRSAQVVAPAASGPCMWVPVSVYSAMGRQNQTFTYLLSGLDLWESADNLVVKGKHTDFFVELDKHCKPLTMHSSLKELVIYVREGINRLKRETS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -