Cpal011384.1
Basic Information
- Insect
- Carterocephalus palaemon
- Gene Symbol
- nfxl1
- Assembly
- GCA_944567795.1
- Location
- CALYMS010000151.1:72849-75323[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 2e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.014 1.4e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 20 3.1e-07 0.003 17.6 15.9 3 19 186 202 185 202 0.95 4 20 0.76 7.4e+03 -2.8 1.1 1 4 227 230 227 234 0.82 5 20 1e-08 0.0001 22.4 13.8 3 19 239 255 237 255 0.91 6 20 1.1e-10 1.1e-06 28.7 14.6 1 19 290 308 290 308 0.99 7 20 1.3 1.2e+04 -3.5 0.7 5 10 332 337 332 337 0.90 8 20 3.7e-06 0.036 14.2 17.1 3 19 345 361 344 361 0.93 9 20 2 2e+04 -4.9 2.1 7 11 365 369 365 370 0.84 10 20 6.7e-05 0.65 10.2 20.3 1 18 395 412 395 413 0.97 11 20 4.7e-08 0.00046 20.3 18.4 1 18 422 439 422 440 0.98 12 20 0.00011 1 9.6 4.9 8 19 487 498 486 498 0.89 13 20 0.0089 87 3.4 7.1 3 12 509 518 508 518 0.90 14 20 0.37 3.6e+03 -1.8 3.3 14 18 547 551 547 552 0.85 15 20 0.45 4.4e+03 -2.1 0.3 8 12 568 572 568 572 0.78 16 20 5.1e-06 0.05 13.8 4.3 1 11 588 598 588 599 0.97 17 20 0.68 6.6e+03 -2.6 1.5 15 18 613 616 612 617 0.82 18 20 7.3e-05 0.71 10.1 17.6 3 18 629 645 628 646 0.85 19 20 2 2e+04 -6.5 3.4 9 13 652 656 652 656 0.71 20 20 4.5e-07 0.0044 17.1 10.1 1 16 687 701 687 707 0.92
Sequence Information
- Coding Sequence
- ATGGCGAAAAGATACCGAGATGCGGCAGCGAAACTGCAGCAGAATGTCCAAAAACATTTGAAGGAAATGAAGGATGTTTCATCTTCAGACGATGAAGAGCCGTATGAGTCCAGTGTTCTCGAAGGTGTGTTCCAGAGTTACTGGAAAGGTGGAGGTGACACTCAGGTGGTGAACAGAACCAAGCATCTTCTAGAAGAAGCAATAAGCGGTCGTGCCGTAACGTGCCTCATTTGCATAGCTTCAATTAAGCGGGTGGACGCTATTTGGACGTGTTACCACTGTCACTGCTACTTCCATCTCTATTGCATACAAAAATGGGCTAATGACAGCATTAGTTTGAGGACGGAAGAAAACGTAGGCCCCATCGCGGTGGTGGTGCCGAAGAAAATCGAGTGGTGCTGTCCGAAATGCCGGCAGTCGTACTGCAAGGAGGAAATACCGCGCCGGTACCGGTGCTTCTGCGGGAAGACCGAGGACCCGCCCTTCCACCCGTGGCTGATACCCCACACCTGCGGCGAGGTGTGCGCCAACAGGCTGTCCACCGGAGACAACTGCAAGCACAAGTGTCTCCTGTTGTGCCACCCTGGGCCGTGCCCTCCGTGCCCTCAGACTGTCAACGGGGTCTGTTATTGCCAAAAGGAAACTAAACGAGTCAGATGTAGTGCAGCCAAGTGGTCCTGCGGCAAACATTGTAAGAGGCTCTTACTCTGCAAGTCACACAAGTGTCAAAACTTGTGTCATGAAGGTGACTGCCCTCCCTGCACCTATACTAGTCTACAACCTTGCCAATGTGGAGCTGAGAGAGTTCAGAGGCCGTGCGATGACTTAATCTggcaatgtaataaaaaatgcaacataTCATACTCATGTGGCTACCATAAATGTCAAGAGATATGCCATAAAGGCGATTGTGGTCCATGCCCAAACTCTGGAATGGTATCATGTCCATGCGGAGCCAATAAGAGGTATGTAGAATGCCCAGATGTTATTGAAACTTGTATGAGTACTTGTAACAGGAAACATGAGGACTGTGAACATAGTTGCCCTGAAAAATGCCATAAAGGGTCATGCCCACCATGCCAAGTGGTTGTGGAGAAAAAATGTCACTGCCAGACTCATACTAAGTCACTGCCGTGCTGTAAAGAATTCAGATGCGAAACCAAATGCAGAGGCACCAGACCCTGTGGGAAACATGGCTGCGGACGGAAATGCTGCAATGGAAACTGTCCTCCGTGCGAGAAGGTCTGTGACAAACCTTTACAATGCGGCCGCCACAGGTGCACTAATGTCTGTCATCACGGACCCTGCTATCCTTGCCACCGCGAATCTAAAATAACTTGCCGTTGTAAAGAAACGTATGTGACTGTCCCCTGTGGCAGAGAAAAGCATACTAAGCCACCGAGATGTAGCCTTCCTTGCAAGATTAAATATAAGTGTGGGCATGCTGAAGAAAATCAACACACATGTCATTTTGGAGACTGTCCATCGTGCAAAGCTATATGCCAGAAAACCTACCCAAAATGTGAACATAACTGCAAAGCTGTTTGCCATGAATATGTTGCTGTGGTTTTCAAACAGGTCGAGAAACCAGCGACACCATGGGATATTCAACCTCCTAAGACTAAAATAATGGCCCTGGAATGCCCACCCTGTGAGGCACCCGTGCCCGTTACCTGCTTTGGTGAACATGAAGTGGATTATCAGCCTTGCCACTCTGCTACAAGAAGGCCCTGTGGCAGAGAATGTGGACAGCCGTTGGCTTGTGGCAACCACAAGTGTGCATTACTATGTCATTTGCACAGCCACGATCCTAACTACCCAAATGTGCCGCACTCCTGCAAGCCGTGTAATAGAGGATGCTCAGTTACCCGTCCTGATAAGTGTAACCACAAATGTCCCAAGAGAAGCTGCCATCCAGGGCCTTGTCCTCCATGCGAAGTCTTGGAGCGTATACCCTGCCATTGTGGTGTAGTTGAACTATACCTACGCTGCAGGGAAGTCTCAGTGGCTACTGAAGAAATGCTATCCTGCAACCAGCAATGTCCAAGAAATCTGGCTTGTGGCCACCGCTGCAAAAACATCTGTCACCCTGGTGAGTGTGACCAAAACCAGATTTGTCTTAAGAAAACCAAAGTTCATTGTCCTTGCGGTAACATCAAAAAAGAAGCACCATGTAAATCCGTACGGGAATTGGAAGTAAATATTGGTTGTGACAAGTCTTGTGAGGAGAAGAAAAGGGCAGTGACAATGGAAAAAGAAAAGGAGCAACAGAGATTAAAGGAATTAGAAGAAGAGAAGAATCGTAGGGAATTAGCAGAGTATGAGTGGAAGCTAAGTGGcaagaaaaagaaatataaagaAAAGAAGGTTGTGGTTAACACAGATGACAGAAATTTGCTACAGAAATATTGGGTTCCTATATCATCTATACTAGTTTTAACAATAGCATCAACttactacatattttatgtCTAA
- Protein Sequence
- MAKRYRDAAAKLQQNVQKHLKEMKDVSSSDDEEPYESSVLEGVFQSYWKGGGDTQVVNRTKHLLEEAISGRAVTCLICIASIKRVDAIWTCYHCHCYFHLYCIQKWANDSISLRTEENVGPIAVVVPKKIEWCCPKCRQSYCKEEIPRRYRCFCGKTEDPPFHPWLIPHTCGEVCANRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCQKETKRVRCSAAKWSCGKHCKRLLLCKSHKCQNLCHEGDCPPCTYTSLQPCQCGAERVQRPCDDLIWQCNKKCNISYSCGYHKCQEICHKGDCGPCPNSGMVSCPCGANKRYVECPDVIETCMSTCNRKHEDCEHSCPEKCHKGSCPPCQVVVEKKCHCQTHTKSLPCCKEFRCETKCRGTRPCGKHGCGRKCCNGNCPPCEKVCDKPLQCGRHRCTNVCHHGPCYPCHRESKITCRCKETYVTVPCGREKHTKPPRCSLPCKIKYKCGHAEENQHTCHFGDCPSCKAICQKTYPKCEHNCKAVCHEYVAVVFKQVEKPATPWDIQPPKTKIMALECPPCEAPVPVTCFGEHEVDYQPCHSATRRPCGRECGQPLACGNHKCALLCHLHSHDPNYPNVPHSCKPCNRGCSVTRPDKCNHKCPKRSCHPGPCPPCEVLERIPCHCGVVELYLRCREVSVATEEMLSCNQQCPRNLACGHRCKNICHPGECDQNQICLKKTKVHCPCGNIKKEAPCKSVRELEVNIGCDKSCEEKKRAVTMEKEKEQQRLKELEEEKNRRELAEYEWKLSGKKKKYKEKKVVVNTDDRNLLQKYWVPISSILVLTIASTYYIFYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00167395;
- 90% Identity
- -
- 80% Identity
- -