Basic Information

Insect: Carterocephalus palaemon
Gene Symbol: -
Assembly: GCA_944567795.1
Location: CALYMS010000227.1:8567-11074[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.03 59 3.9 4.2 18 43 9 31 3 32 0.94

2 15 4.2e-05 0.081 13.1 6.0 5 44 25 61 25 61 0.92

3 15 0.00013 0.25 11.5 0.5 18 43 69 91 67 92 0.95

4 15 0.04 79 3.5 0.1 17 44 99 123 96 123 0.86

5 15 5.6e-05 0.11 12.7 4.9 15 43 157 182 149 183 0.89

6 15 0.00034 0.67 10.1 1.5 18 43 189 211 184 212 0.90

7 15 0.19 3.8e+02 1.3 0.1 19 29 221 231 218 242 0.80

8 15 1.1 2.2e+03 -1.1 0.0 35 44 266 275 256 275 0.81

9 15 1.7 3.3e+03 -1.7 0.0 18 28 365 375 360 388 0.68

10 15 5.6 1.1e+04 -3.4 12.5 12 44 438 467 404 467 0.52

11 15 0.45 8.9e+02 0.2 3.3 19 44 475 497 472 497 0.78

12 15 0.3 6e+02 0.7 0.2 31 43 514 526 504 527 0.74

13 15 5.4e-06 0.011 15.9 0.9 13 44 561 589 552 589 0.88

14 15 0.28 5.5e+02 0.8 0.1 15 28 606 619 601 633 0.85

15 15 2 3.9e+03 -1.9 0.1 17 27 638 648 630 649 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.03	59	3.9	4.2	18	43	9	31	3	32	0.94
2	15	4.2e-05	0.081	13.1	6.0	5	44	25	61	25	61	0.92
3	15	0.00013	0.25	11.5	0.5	18	43	69	91	67	92	0.95
4	15	0.04	79	3.5	0.1	17	44	99	123	96	123	0.86
5	15	5.6e-05	0.11	12.7	4.9	15	43	157	182	149	183	0.89
6	15	0.00034	0.67	10.1	1.5	18	43	189	211	184	212	0.90
7	15	0.19	3.8e+02	1.3	0.1	19	29	221	231	218	242	0.80
8	15	1.1	2.2e+03	-1.1	0.0	35	44	266	275	256	275	0.81
9	15	1.7	3.3e+03	-1.7	0.0	18	28	365	375	360	388	0.68
10	15	5.6	1.1e+04	-3.4	12.5	12	44	438	467	404	467	0.52
11	15	0.45	8.9e+02	0.2	3.3	19	44	475	497	472	497	0.78
12	15	0.3	6e+02	0.7	0.2	31	43	514	526	504	527	0.74
13	15	5.4e-06	0.011	15.9	0.9	13	44	561	589	552	589	0.88
14	15	0.28	5.5e+02	0.8	0.1	15	28	606	619	601	633	0.85
15	15	2	3.9e+03	-1.9	0.1	17	27	638	648	630	649	0.85

Sequence Information

Coding Sequence: ATGTTTCACAGCCAGCCAGAATTCGTGTGCGCCCTCTGCGAGCGCACGTTCGCGATGAAACACAACCTTCAGAAACACATAACCAACTGCCATATCGACGACGGGGCGTGCGTTTGTTCTATATGCGAGAAGAAGTTCGCGAGCCCTCTGGGCCTGAAGCGGCACCTGAGGAGAGGCCACAATAGGTTCATGCGGCCGCAGCCGGAGTGCGAGCATTGTGGACAGACCTTCGAGCGGAAGGAGAACATTGTCAGGCATATGAAGCAGCGGCATGCGTTGGGTTCAACGCCATCCATACCTTGCGAGACGTGCAACGAGAAGTTTTCAAGTGATATAATCCTTAAACGTCACATCGACAAGTTCCACAAGGAAAATGTGGAATTTCAGGCTTGCGATGAATGTAACCTGGTGTTCCGCAAGGAATCTCTGATTGCTCACGTCCTGAATGACCACAAGGTGTCTGAGACCGAAATAGTCAGCTGTCAGTTCTGCAGCAAGGTGTATTCCTGCCACAAGAACCTAAAACGGCACATCGTGTCCCATCATGGCACGAATGAGGAATTCAAGTGTATATTCTGCCCCAAGAAGCTCACCTCAAACCTGGGCTTGAGACGACACATAAAGACCTCTCATCATATTGACATGCCTAGAGAATTCAGTTGCGACTACTGCTCAAAATCGTTTTCCCAGCAGCCTTATCTCGATACACACATCTCTCTGCACCATAAGGGTAAGCGAAAGAACCCGTTGAAATTCCCTTGCGAATGCGGCAAAGTGTTTGAAACCGAGCCAGAGTTAAGACAACACGTCAAAACTGAACACAGCCTCGACGTTTTCTACTCTTATTGCAAAAACTCCTTCCTTCGCACGGCGAATATTACGGGAGACAATGCAAAGAAACAAACTGCCGGTCACGACTGCGAGGTGTGCCAGAAGCATTTCGGCGCGCTTTACGATCTACGGATACATTTAAAAGTCAACCACAACATGGAATTCTCGCTAGAATACTGCAACGTTTGCTTTTCGAAATTCTACAGTAAGGAAACCTTGGATAAGCataaggaaacctgcgtgccgcCCGACACAGAGAAGAATTGCGGTCTCTGCGATAAACTGTTTACGGAAGCAGTGAGTCTCAAATTTCACATGAAAGTATTCCATACGCCGGAACAAGTGATGCTTCTCAATGGAAGCGCTGACTTTCTCGACTCGACGGACGACGAGGAAGCTCAGAAGGAATCTAGATGCGAGCACTGCGACAAAGTATTCACTTCCGAAGGAAACCTTAAGAAGCACCATAAATACGTCCACTTGGGCGTGCAAAGATGCAAGTGTCCTGAGTGCGGTACCCATTTCAACGACAGAAGGAATATGCGACGGCACATCCGCATAAAGCATCCTCACTGCCCTCGGTTCCCACTGTGCCGCTTCTGCCGCAAACGCTTTGAATCCGCCCAAGCCTGCCATATGCACCTCCAGCGAGCCCACTCCTTCGACACCGGCGGGTTCCCTTGCGACAAATGCTCTCTATCCTTCGCCAACAGCGCTTCGCTTAACTCTCACATCAAGAGCAAACATGTCAATGAAGAGGAACTCCTGAAATGCGGGGATTGTGGCCTATTCTTTGAATACGAGACACTTGAGCCACACAAGTCGAAGTGCGGGAAAACGTTGGACACGCAACTTACATCACCAAAGTGCGTTATTTGCATGAAGGAGTTCAGCGCAGAGTTAACACTGAAGCGTCATATCAGACGATTCCATCAAGAATTCGATCCGAAGGAGTTGATTACATTGGGATACAGCAACAAACCTTTCTTCGTTGAATGTAAGGACTGCTTAAAGAAGTTTTCAGATAATGAGGTCtataaaatctatttgaatAACAAGCGGTTCAGGGATTTTATAGTATTCAAATGCGAGACGTGTGGCGAATCGTTCAGCGTTCCTGAGTACGCCATTGTGAGGCATAAGAGGGCGATGGAGGCACGAAAGAAGAAGCGACCGCCTCATGTTATAAAGGAAATGGAGAGATCTAACGCGCTAACGAGACTCCCTGGTGAGGGTCTAAGGGCATTTTTGAAAAGAAAACTGAAACGTTAA
Protein Sequence: MFHSQPEFVCALCERTFAMKHNLQKHITNCHIDDGACVCSICEKKFASPLGLKRHLRRGHNRFMRPQPECEHCGQTFERKENIVRHMKQRHALGSTPSIPCETCNEKFSSDIILKRHIDKFHKENVEFQACDECNLVFRKESLIAHVLNDHKVSETEIVSCQFCSKVYSCHKNLKRHIVSHHGTNEEFKCIFCPKKLTSNLGLRRHIKTSHHIDMPREFSCDYCSKSFSQQPYLDTHISLHHKGKRKNPLKFPCECGKVFETEPELRQHVKTEHSLDVFYSYCKNSFLRTANITGDNAKKQTAGHDCEVCQKHFGALYDLRIHLKVNHNMEFSLEYCNVCFSKFYSKETLDKHKETCVPPDTEKNCGLCDKLFTEAVSLKFHMKVFHTPEQVMLLNGSADFLDSTDDEEAQKESRCEHCDKVFTSEGNLKKHHKYVHLGVQRCKCPECGTHFNDRRNMRRHIRIKHPHCPRFPLCRFCRKRFESAQACHMHLQRAHSFDTGGFPCDKCSLSFANSASLNSHIKSKHVNEEELLKCGDCGLFFEYETLEPHKSKCGKTLDTQLTSPKCVICMKEFSAELTLKRHIRRFHQEFDPKELITLGYSNKPFFVECKDCLKKFSDNEVYKIYLNNKRFRDFIVFKCETCGESFSVPEYAIVRHKRAMEARKKKRPPHVIKEMERSNALTRLPGEGLRAFLKRKLKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00277553;
90% Identity: iTF_00277553;
80% Identity: iTF_00277553;