Cpal008019.1
Basic Information
- Insect
- Carterocephalus palaemon
- Gene Symbol
- -
- Assembly
- GCA_944567795.1
- Location
- CALYMS010000102.1:2182721-2183372[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-09 8.4e-06 25.7 0.0 23 107 3 74 1 81 0.86 2 2 4e-11 1.3e-07 31.6 0.0 12 95 125 195 122 198 0.93
Sequence Information
- Coding Sequence
- ATGTTCGGCCTGGGCACCATAGGCGGCAACATAGCGTCGCCGCTGCTgagcgcgctgctggcgccgtGGGAGCCGCTCGCGGCGCCCGGCGACCCGCTGCCGGCCTTCGCCAAGTGGCGGCGCGTGCTCGCCGAGGAGGCCTACAGCAGCCTGCTGTGGCAGCACTTCCTGCCCAGGATCATCGCAGCGGCCGAGCGGCAACATAGCGTCGCCGCTGCTgagcgcgctgctggcgccgtGGGAGCCGCTCGCGGCGCCCGGCGACCCGCTGCCGGCCTTCGCCAAGTGGCGGCGCGTGCTCGCCGAGGAGGCCTACAGCAGCCTGCTGTGGCAGCACTTCCTGCCCAGGATCATCGCAGCGGCCGAGTGAGTCAAACTAACCACCCGCTGGAGTACGAGATGTTCGGTCTGGGCACCATAGGCGGCAACATCGCGTCGCCGCTGCTgagcgcgctgctggcgccgtGGGAGCCGCTCGCGGCGCCCGGCGGCCCGCTGCCGGCCTTCGCCAAGTGGCGGCGCGTGCTCGCCGAGGAGGCCTACAGCAGCCTGCTGTGGCAGCACTTCCTGCCGAGGATCACAGCAGCGGCCGAGTGA
- Protein Sequence
- MFGLGTIGGNIASPLLSALLAPWEPLAAPGDPLPAFAKWRRVLAEEAYSSLLWQHFLPRIIAAAERQHSVAAAERAAGAVGAARGARRPAAGLRQVAARARRGGLQQPAVAALPAQDHRSGRVSQTNHPLEYEMFGLGTIGGNIASPLLSALLAPWEPLAAPGGPLPAFAKWRRVLAEEAYSSLLWQHFLPRITAAAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -