Cfug007291.1
Basic Information
- Insect
- Carpatolechia fugitivella
- Gene Symbol
- PAXBP1
- Assembly
- GCA_951230895.1
- Location
- OX579649.1:3039874-3063099[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0048 58 4.1 0.1 183 206 499 522 483 527 0.90 2 2 5.3e-14 6.4e-10 40.1 0.4 4 190 513 679 510 691 0.80
Sequence Information
- Coding Sequence
- ATGTCGATGTTTCGGAAACCAAAGAAACCGATCCAGCGGCGTGTGTTTACTGCAGATGATGATGAGGACCCTGAAGGTAACGGGGAGCCGCTGGCGCCTCCTCCGCCGGTCATCAGCCGGCAGAAGAAGGAGAAGGAGAAAGAGAAGCCAGTCAAACCTGCCTGCCTGAGTTTCGCTGACGAAGAGGAAGAAGGTGAAGTGTTCAAGGTGAAGAAATCTAAGCAGAGCAACAGACTGGCCAAGAGGAAAGAGAAGGAACGTAAGAAGCCCACTGAAGATGATGATAAGAGTAATAATGAGAATGGAGagCCAATGGACGTAGACAACCCACCAGCTAAACCGAAGAAGAAAATAACTCTCGAGGGCTTAATACTGAGCGGACGGGAGGCTTTAGCAGCAGATGGAGCGGGGGATCTGTCTGAGGAGGACGGAGATAACGAAGAAGAGGAGGATAGCAAGGGTTTCCACCAGTACCGAGCGGAGTCGGTCCGGGCGGCCCTGGCTGTCGGGGGACACATCCCCGACGCGGCGCTCATCCACGCCGCTCGCAAGACCAGACAGCAGGCTCGCGAGCTGGGTGGAGACTACATTCCGATCAAGCCGTCGGAAGCCAAGCCGGGCTCGCGGCTCGTGCGAGACGACGGCTCAGGCGACGACGACGAAGATGGACGGATTGAGGTGCGCGGCTTGGAACTGCCCAGTGACAAGCCGAAACGTGGCACGGCAGCCGCGCCGACCAACGAGGAGCTGGACAGCGAGCCCGACGAGTGGGAGGAACAGCAGATCAAGAAGGCCATGCCTGCCATACCGGATATCATGGGTGAAGGCGGCATAGAGTTGAACCCGTTCGCATtagtgccgccgccgccgcgcctcgCCGACGCCCCCCCGCACCTCCGCCCCCTCGCCGCGCACACCAACGCGAGGGAACTGGTGCACGCGCTCACTGCACGGTTACAAGAACTAAAAACGGAACGTCAGAGCACAGCCGCGACGGTCCAGCAGCTGCGAGACAGGCTGCTGACCGCGGCGCGCATTCGGGAGAGCCGCAGCGCCAAGTGCGGAGCCCTAGACGCGGCCTACAGGAGGGCGCAGGCCGCCCGCGGGTACATCACCGACCTCGTCGAGTGCTTGGATGAAAAGATGCCAGCGTTAGAAGCCCTGGAAGCTCGTGCATTGGCGTTGCACCGGCGGCGCTGCACTTTCCTTTCGGAGCGGCGCCGCGCTGACGTCAGAGATCAAGCGCAAGACGTGCTCTCAGCTGCCgCTCGGCCGGGCGCTTCCAAACCAGTGGATTCCGAAGACAAGATCCGTCGCGCGGCAGAGCGAGAGGGAAGACGGAGAGCGAGACGGCTGCTGCGGGAGTCGGCCGCGGCCAACACGGGCGCTACCGTCCGACACAGGGACGGCGATTCGAGTGACGATTCGTTACCTCCCGCCGAGTCGCAACACGCGCGGTGCGAGAGAGACTCGATCCGCACCCTCTCCGCGTCGCTGTTCGCGGACGCCTTGCGCGCGTGGCGATCAATGCGCGGCGTGTGCGCACGACTGTCCCGCTGGCGCCGGCTCGAGCCCGTCTTCTACACCGACGCTTACGTCGCAGCCTGCCTGCCCAAGCTGCTGGCGCCGTACGTGAGGCAGCAGCTCATCCTATGGAACCCTCTAGCCGATGAAGACAACGAAGACTACGAACGGATGGACTGGTACCGTACTCTCTGCATGTACGGGGTGACGTCACAGGACGACGGCGACAGCTCGGGCTCCAGTGGGGACGAGGACGAAGGGTTCGTGGGCGCGGTCAGCGAGGAAGCTGTGCGGGCGGACGCGGATCTGATGCTCGTGCCGGCCATTCTAGCCCGTGTGCTTATTCCTAAACTTACAGAACTAGTAGAACACGCCTGGGACCCGATGTGCGTCCGCGCCTGCATCCGCTTGAGACAGCTCATCATCAAGCTCAGCGCCGTGCCCGAAGCCAATCCAGCATTACAGCGCTTAGCCGCCGCCGTCAAGTCTAGACTCACTGGCGCTCTGCAGGCCGACGTATTCCTCCCCGCCTTGCCTCCACAgaTAATGGAAGGTTCGGGCGGCTCGTTCTGGCGGCGCTGCCTCGGCGCGGGGGTGAGGTTGCTGCGATCCTCCCTCGCGCTCACCGGACCGCCGCCATTGCTATACGCCGACCCGCTGGTGCTCAAACTCATAGAGACGTTGTGTTgcgcggcgggcgcggcgcCCCCTCCGCAGATGTGCGTGGCCTGCGTGTCCCTCGCGGAGACCCTGCCCCGCGTCGGAGCCCTGCGCGCCGCCGCGCTGCGCCGCATCGCGAAACTCGCCGCACTCGCGCAGGCGCGCCTGCAGAGCGACAACCCGCTACACGGGAAAGCCCTAGAACAAGCGAGGAACGTGATAGCAGACGCCAAAGCAGCCGAATGA
- Protein Sequence
- MSMFRKPKKPIQRRVFTADDDEDPEGNGEPLAPPPPVISRQKKEKEKEKPVKPACLSFADEEEEGEVFKVKKSKQSNRLAKRKEKERKKPTEDDDKSNNENGEPMDVDNPPAKPKKKITLEGLILSGREALAADGAGDLSEEDGDNEEEEDSKGFHQYRAESVRAALAVGGHIPDAALIHAARKTRQQARELGGDYIPIKPSEAKPGSRLVRDDGSGDDDEDGRIEVRGLELPSDKPKRGTAAAPTNEELDSEPDEWEEQQIKKAMPAIPDIMGEGGIELNPFALVPPPPRLADAPPHLRPLAAHTNARELVHALTARLQELKTERQSTAATVQQLRDRLLTAARIRESRSAKCGALDAAYRRAQAARGYITDLVECLDEKMPALEALEARALALHRRRCTFLSERRRADVRDQAQDVLSAAARPGASKPVDSEDKIRRAAEREGRRRARRLLRESAAANTGATVRHRDGDSSDDSLPPAESQHARCERDSIRTLSASLFADALRAWRSMRGVCARLSRWRRLEPVFYTDAYVAACLPKLLAPYVRQQLILWNPLADEDNEDYERMDWYRTLCMYGVTSQDDGDSSGSSGDEDEGFVGAVSEEAVRADADLMLVPAILARVLIPKLTELVEHAWDPMCVRACIRLRQLIIKLSAVPEANPALQRLAAAVKSRLTGALQADVFLPALPPQIMEGSGGSFWRRCLGAGVRLLRSSLALTGPPPLLYADPLVLKLIETLCCAAGAAPPPQMCVACVSLAETLPRVGALRAAALRRIAKLAALAQARLQSDNPLHGKALEQARNVIADAKAAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01403448;
- 90% Identity
- -
- 80% Identity
- -