Basic Information

Insect: Caradrina kadenii
Gene Symbol: stc
Assembly: GCA_947462355.1
Location: OX381681.1:12556393-12566501[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.8e+04 -4.4 1.6 15 19 585 589 584 589 0.81

2 14 0.043 3.9e+02 1.2 1.2 2 10 617 625 617 625 0.93

3 14 4e-05 0.37 10.9 18.1 4 19 633 648 631 648 0.93

4 14 1.2e-07 0.0011 18.9 11.7 1 18 684 701 684 702 0.98

5 14 2 1.8e+04 -4.1 2.4 7 11 706 710 706 711 0.89

6 14 0.0011 10 6.3 16.0 1 19 743 761 743 761 0.98

7 14 1.9e-05 0.18 11.9 12.7 1 19 802 824 802 824 0.87

8 14 2 1.8e+04 -5.4 2.2 6 10 854 858 854 858 0.94

9 14 0.0036 33 4.7 7.4 1 11 864 874 864 875 0.95

10 14 0.046 4.3e+02 1.1 0.3 4 10 879 885 878 886 0.93

11 14 6.6e-06 0.061 13.4 15.0 3 19 893 909 891 909 0.92

12 14 0.00059 5.4 7.2 9.2 10 18 956 964 953 965 0.92

13 14 4.8e-08 0.00045 20.2 14.0 1 17 1001 1019 1001 1025 0.85

14 14 0.0034 32 4.7 8.1 1 14 1031 1043 1031 1059 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.8e+04	-4.4	1.6	15	19	585	589	584	589	0.81
2	14	0.043	3.9e+02	1.2	1.2	2	10	617	625	617	625	0.93
3	14	4e-05	0.37	10.9	18.1	4	19	633	648	631	648	0.93
4	14	1.2e-07	0.0011	18.9	11.7	1	18	684	701	684	702	0.98
5	14	2	1.8e+04	-4.1	2.4	7	11	706	710	706	711	0.89
6	14	0.0011	10	6.3	16.0	1	19	743	761	743	761	0.98
7	14	1.9e-05	0.18	11.9	12.7	1	19	802	824	802	824	0.87
8	14	2	1.8e+04	-5.4	2.2	6	10	854	858	854	858	0.94
9	14	0.0036	33	4.7	7.4	1	11	864	874	864	875	0.95
10	14	0.046	4.3e+02	1.1	0.3	4	10	879	885	878	886	0.93
11	14	6.6e-06	0.061	13.4	15.0	3	19	893	909	891	909	0.92
12	14	0.00059	5.4	7.2	9.2	10	18	956	964	953	965	0.92
13	14	4.8e-08	0.00045	20.2	14.0	1	17	1001	1019	1001	1025	0.85
14	14	0.0034	32	4.7	8.1	1	14	1031	1043	1031	1059	0.90

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAACACTTACGCCTACAACAACCAGTACCAAGCTTGGAATGGCGACCCAAATGTCCAATATGTCAACCAAGCCTACTACCCCAATAGACCTGAGCAAGCTAACCAGTATGTTAGTTTTAATGAGTTTCTTTCTCAAATGCAAAACAGTGGTACGCCCAGCACTAGCAACTATACCAATGTCCAATATGAAAACTATCCTACAAGGCAATATAACTACCAGAATGTACCATCAACAGCTCAAAACCCCCAGTTAGACAGTTATGGATATGCCGCAACCACATCCAATGTGTCCAGTGGCACTGAAGCATACCCCATGAATGTTCAAAGTCAATACAACCCAGTGGCACCAAATCCTAATGCTTATACAAATGCAATGATACTCAAATCTAATCTCACTCCAACAGCTACCGAGTTTGTGCCAAAAGGTTCTATGATGACACCTTCAAGTAGCACTCAGAACATTACTGAACCTAGTACTGTACATGATGAAAGTGAATCTAGAAATAATTATAGTAATGTAAATGAACCTAGGAACCAATACAATAGTATGAATGATCCACGAAATAACTACCCTAGTGTAAGTGAACCACGAATCACCAGTGGTAGTTCATCAGACACAAACTGGAGAGAGAGATCACAAAGCTCACAACAAAACGCTGAAATAAGCCAGAAAGCTGAATCATACCAACGTCCCCAAGAACACCCCAGAAATCAAGAATCAAATGGCCGCTACCGTGATAACAATTATCGCTATAACGAATCAAATCCGCGACATCATGATTCAAACAACCGCAATCAGGAATCTAACAACTTTAATCAAGAACCGGATACTAGACAGTATGAATCAAATAATCGCCAACAAGACCCCGGCAGTCGCAACTATGAATCTAATAACCGTAACTATGATTCAAGTAATAAAAGAGGCCAAGGAAAAGGAAATTACAAGTCAAAGAATAAAGACGATGCTCGTACCTTCTACAACAGTGCTATAAGTAAGGACAGTCAGGATGTAAGAAATGGCAGAGGAGAATCTTCAGGGCGCGGAAAGAATTGGGTTGGAACTCCACGACTTCGCACAATAGATCGTAATAACCCAGAGGATGAACAATATGCCAATACTTACTTACAGGGTAGAGAAGAGAGGATGGAGAGAGATAACAGAGACAAGGAGAGAGAGAGCAAAGATAGAGATAGGGAACAAGAAATCCGAGAGAAGGACAGAGATAGTAGAGATATCCGTGAAAAAGACAGAGATTACCAAGATGTTCGTGATACTGAGAGAGATAGGCGTGATATTCGCGAAAGAGACAGAGGTAACAGAGATATCCGCGAAAGGGATAGAGATTATCGAGATGTCCGTGAGAGGGATAGAGACAACAGAAATACTCGTGACATGGATAGGGATTACCGAGATGTCCGTGAAATGGATAGAAGTAACCGAGATATTCGCGAGAGAGACAGAGATACTAAAGAGAGGGAGAGAGCAAGCAAGTCTGAAAATGTTTCCAGTCCTGCTCGAACTAAAACTAAATACGGCAATGATCAAGTAAACAAAGAGATGACCCAACGTGAGCGTTTAACTGAACAGCTAGACAAGGGCACACTGGAGTGCCTGGTCTGTTGCGACAGAGTCAAGCAATACGACCAGGTGTGGTCATGCTGCAACTGTTACCATGTGCTGCATCTGAGGTGCATCCGGAAATGGGCCATGAGCAGTATGGTTGAGGGCAAGTGGCGCTGCCCAGCCTGTCAGAACACGAACGAAGCCATCCCTACTGAGTACCGCTGCATGTGTGGAGCAATGCGCGCGCCAGACTACCAGCGCGGCTCCACTGGCGCACACACCTGTGGCCGCGCCTGCCGTCGCCCCAGGACATGCCCGCATCCCTGCACGCTGCTGTGCCATCCCGGGCCATGCCCACCCTGCCAGGCTACTGTTGTCAAAAATTGTGGTTGCGGCGTAGAAACCCGCTCCGTACTCTGCAGCAGCAAGTTACCGCAAGTGTGCGGTCGCGTGTGTGGGCGCACCCTGCTGTGTGGCGTGCATAACTGTACCAAGGAGTGTCACGAGGGGCCCTGTGACATATGCGTTGAAACTGTCGAACAAGTATGCCACTGCCCGGCCGCCAAGTCGCGCTCGGTGGCGTGCACGGCGGAGACGGGCGCGTGCCTGCACTGGTCGTGCGGCGACACGTGCGGCCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCACTGCCACGCGCCGCCCTGCCAGCCCTGCCAGCTGCTGCCGGAGTACGTGCGCAGCTGTCCTTGTGGGCACACGCAGTTGACTAAAGATTCTCGCAAAGCCTGCACAGACCCGATCCCGTTGTGCGGCAACATCTGTGCCAAACCGCTGCAGTGCGGCCCCGCCGGGGACAAACATTTCTGCAAGCTTAATTGTCATGAAGGACCGTGTCCAGAATGTCCCGACAAAACAGTGCTGCAGTGCCGCTGCGGACACTCGAGCCGCGAGGTGCCCTGCGCCGACCTGCCTCAGATGTACAACAATGTACTGTGCCAAAAGAAGTGCAATAAGAAGCTGTCGTGCGGGCGGCACCGCTGCCGCACGGTGTGCTGCGCGGCGACGTCGCACCGCTGTGCCGTGGTGTGCGGCCGCACGCTGTCCTGCCAGACGCACCGCTGCGAGGAGTTCTGCCACACCGGACACTGCGCGCCCTGCCCTCGCGTCAGTTTCGAGGAGCTGTCGTGTTCGTGCGGCGCGGAGGTGCTGCTGCCGCCGGTGCGCTGCGGCGCGCGCGCGCCCGCGTGCTCGGCGCCGTGCACGCGCGCGCGCGCCTGCCGCCACCCGCCGCACCACTCGTGCCACGCGGGGGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCCATGGCGACCATGAGGAGCGAAAAACAATACCATGTTCTCAAGAGGAGTTCTCGTGCGGACTTCCTTGCGGCAAACCGCTTCCTTGCGGCAAGCATACCTGTATCAAGACTTGTCACAAGGGCCCCTGTGACACTGGCAAATGCACACAGCCGTGCATGGAGAAGCGCCCGAGCTGCGGGCACCCGTGCGCGGCGGCGTGCCACGTGGGCGCAGGAGCGGACGGCGCCGTGACGCCGTGCCCGAGCTCCGCGCCGTGCCGCCGGCTCGTGCGCGCCACCTGCCCCTGTGCCCGGCGGCACGCCGACCGCCCGTGTTGCGATAACGCCAGGGACTATGCTAAGATGATGAGCGCTCTAGCTGCCACGAAGATGTCAGAAGGCGGTTCCGTCGACCTGTCAGATGTACAGCGCCCCGGCAGTATGCTCAAAACGCTGGAGTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGGCAGCTGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACGGCCGCGCGCGAGCCCGCCTTCGCGCACCAGGTGCACGACAAGCTCACCGAGCTCGTGCAGCTCGCAAAGAAGTCCAAACAAAAGACCCGAGCTCACTCCTTCCCATCGATGAACTGGCAGAAGCGTCAGTTCATACACGAGCTTTGCGAACACTTTGGCTGTGAGAGCGTCGCCTACGACGCCGAACCAAATAGGAACGTTGTCGCTACTGCTGACAAAGAAAAGTCATGGCTTCCCGCCATGAGCGTGCTGGAGGTGCTCGCACGCGAGGCGGGCAAGCGTCGCGTGCCCGGGCCCGTGTTGCGTGCGCCCGCGCAGCCTCACGCGCACGCGCCCGGCGGAGCCGGCGCCGTCCCTAAATCGGGTTGGGCAACGCTAACGTCCACCAACGCATGGGCCGCCCGCAGCCAACCGAAGCCGCAGCAGCCGCAGCAACCGCCTGCAGAAAAAATCGACTATTTCGACAACCCGCCAGACAACTAG
Protein Sequence: MSQWNNTYAYNNQYQAWNGDPNVQYVNQAYYPNRPEQANQYVSFNEFLSQMQNSGTPSTSNYTNVQYENYPTRQYNYQNVPSTAQNPQLDSYGYAATTSNVSSGTEAYPMNVQSQYNPVAPNPNAYTNAMILKSNLTPTATEFVPKGSMMTPSSSTQNITEPSTVHDESESRNNYSNVNEPRNQYNSMNDPRNNYPSVSEPRITSGSSSDTNWRERSQSSQQNAEISQKAESYQRPQEHPRNQESNGRYRDNNYRYNESNPRHHDSNNRNQESNNFNQEPDTRQYESNNRQQDPGSRNYESNNRNYDSSNKRGQGKGNYKSKNKDDARTFYNSAISKDSQDVRNGRGESSGRGKNWVGTPRLRTIDRNNPEDEQYANTYLQGREERMERDNRDKERESKDRDREQEIREKDRDSRDIREKDRDYQDVRDTERDRRDIRERDRGNRDIRERDRDYRDVRERDRDNRNTRDMDRDYRDVREMDRSNRDIRERDRDTKERERASKSENVSSPARTKTKYGNDQVNKEMTQRERLTEQLDKGTLECLVCCDRVKQYDQVWSCCNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTNEAIPTEYRCMCGAMRAPDYQRGSTGAHTCGRACRRPRTCPHPCTLLCHPGPCPPCQATVVKNCGCGVETRSVLCSSKLPQVCGRVCGRTLLCGVHNCTKECHEGPCDICVETVEQVCHCPAAKSRSVACTAETGACLHWSCGDTCGRVLACGAHVCRAHCHAPPCQPCQLLPEYVRSCPCGHTQLTKDSRKACTDPIPLCGNICAKPLQCGPAGDKHFCKLNCHEGPCPECPDKTVLQCRCGHSSREVPCADLPQMYNNVLCQKKCNKKLSCGRHRCRTVCCAATSHRCAVVCGRTLSCQTHRCEEFCHTGHCAPCPRVSFEELSCSCGAEVLLPPVRCGARAPACSAPCTRARACRHPPHHSCHAGDCPPCVVLTTKRCHGDHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCMEKRPSCGHPCAAACHVGAGADGAVTPCPSSAPCRRLVRATCPCARRHADRPCCDNARDYAKMMSALAATKMSEGGSVDLSDVQRPGSMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSEHVRATAAREPAFAHQVHDKLTELVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPAQPHAHAPGGAGAVPKSGWATLTSTNAWAARSQPKPQQPQQPPAEKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00809740;
90% Identity: iTF_00810680;
80% Identity: -