Ckad008724.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Caradrina kadenii
Gene Symbol
nfxl1
Assembly
GCA_947462355.1
Location
OX381696.1:9883598-9886081[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 1.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.021 1.9e+02 2.2 0.2 4 10 169 175 168 176 0.96
3 20 4.3e-07 0.004 17.2 15.8 3 19 186 202 185 202 0.95
4 20 1.6 1.5e+04 -3.8 0.6 6 10 227 231 226 231 0.78
5 20 9.1e-08 0.00084 19.3 12.2 1 19 237 255 237 255 0.93
6 20 1.7 1.6e+04 -3.9 1.9 6 10 280 284 279 284 0.83
7 20 5.4e-08 0.0005 20.1 9.3 1 19 290 308 290 308 0.98
8 20 9.1e-06 0.084 13.0 19.6 3 19 345 361 337 361 0.86
9 20 1.2 1.1e+04 -3.4 0.4 7 11 365 369 365 369 0.84
10 20 2 1.8e+04 -5.3 2.2 5 10 384 389 384 389 0.88
11 20 6.7e-05 0.62 10.2 20.3 1 18 395 412 395 413 0.97
12 20 4.6e-10 4.2e-06 26.7 13.7 1 19 422 440 422 440 0.99
13 20 0.0061 56 3.9 12.9 4 19 481 499 479 499 0.81
14 20 0.0012 11 6.2 6.9 1 12 509 519 509 519 0.90
15 20 0.41 3.8e+03 -1.9 3.4 14 18 548 552 548 553 0.85
16 20 0.22 2.1e+03 -1.1 0.2 8 12 569 573 568 573 0.79
17 20 3.7e-05 0.34 11.0 5.4 1 11 589 599 589 600 0.97
18 20 0.00024 2.2 8.4 14.2 4 18 631 646 629 647 0.84
19 20 2 1.8e+04 -6.5 3.4 9 13 653 657 653 657 0.71
20 20 2.6e-06 0.024 14.7 12.3 1 16 688 702 688 707 0.92

Sequence Information

Coding Sequence
ATGGCGCGCAGATACAGAGATGCAGCTGATAGATTGCACCAAAACGTCCAGAAACATCTAAACGACATGAAGGAACTGTCGTCGTCTGAAGATGAGGATCCTTACGAGGCGAGCATCCTGGTAAGCATATTTCAGAGCTACTGCCGGGGCGGCGGAGATACTAACATGCTGAACAGGACTAAAAACCTCCTTGAAGAAGCCATAAGCGGCCGCTCCGTAACCTGCCTCATATGTATAGGGTCGATCAAAAAGTCTCACGCTATATGGACTTGCGATCATTGCTTTTCCTATTTCCACCTGTCTTGTATACAAAAATGGTCAAATGATAGTATAAGTTTACGCACCGAAGAAAGTACCGGCCCGATAGCTGTGATAAAACAACTGAAAATCGAATGGTGCTGCCCTAAGTGCCGAAACTCTTACACTAAGGAAGAAATTCCGCGTAAATATCGTTGTTTCTGCGGAAAAACTGATGACCCAGAACACCAACCTTGGCTTGTTCCTCACACTTGTGGAGAAATCTGTGGAAAGAGACTGTCTACTGGTGTCAATTGTGAGCATAAGTGCTTGCTCTTATGTCACCCAGGTCCCTGCCCTCCGTGCCCACAGACTGTTAATGGGATATGTTATTGTCAGAAGGAGCGTAAGAAAGTGAGATGTAGTGCTGCGAGGTGGTCCTGTGGCCAAGTATGCAGGAGAACACTTTTGTGTAATACTCATTATTGTGAAAATGTTTGTCACCCAGGTGATTGTCCCCAATGCAGGTACGTCAGTGTTCAGCCATGTCAATGTGGTTCTGAAAGAGCTCAAAGACCATGCAATGATCCATTCTGGCAATGCAAGAAGCCATGTAATAAATTATTTTCATGTAGTTATCATAATTGTGAGAAAGTTTGTCATTGGGGTGATTGTGGAGACTGTCCTAATTCAGGCATGTTATCATGTCCCTGTGGTGCCACACAGCGCTTTGTCCAATGTCCTGATGTCATGGAAACCTGCCTAGGCACATGTGGTAAAAAGCATAGAGGTTGCGAACATAGATGTCCAGAAAAATGTCATAATGGGAACTGCCCACCTTGCCAAGTTCTTGTTGAAAAGAAATGCCATTGTTCAACACATACAAGGTCTTTACCATGTAGCAAAGACTTCAAATGCGAGACAAAATGTAGAGGGATGAGACTATGTGGCAAACATGGCTGCGGAAGAAAGTGCTGCAATGGCAACTGCCCTCCATGTGAGAAAATTTGTGATAAAGGCCTCCAGTGTGGTAGGCATAGATGCACAAATATCTGTCATCGAGGACCATGCTACCCATGTCCTTTAGAGTCGAAAGTAACTTGCAAATGCAAAGAAACTTATGTTAGAGTCGCATGTGGACGGGAACGGCAGACAAAACCACCAAAGTGCAACTTGCCATGCCAAATTAGATACAAGTGTTTTCACACCTGTAAAGAAAATAAACATAACTGTCATTTTGGTGAGTGTCCTCCATGCAAAGCAATCTGTAACAAGCAGTATCCGAAGTGTAGTCACAGATGTAAATCAGTATGCCATGAGTATGTTGCGGTGGTGTTCAAACAGGTTGAAAAACCGGCCACCCCATGGGAAGTGCAACCACCAAAGACCAAGATAATGACCTTAGAGTGTCCTCCATGTGACACACCCATACCAGTGGTTTGCCTTGGAGAGCATGTGACAGACAACCAACCCTGTCACAGTGCTACGAGGAGCAATTGCGGAAGAGAATGTGGACGGCCATTGGCTTGTGGAAATCACCAGTGCACTTTACTCTGTCATCTTCACAGCCCTGTTCCTGAATACTCTAATGTGTCTTCCACTTGCAAGCAATGTGACAGAGATTGTTTAGTCCCACGTCCTGAAAAGTGTACCCATACATGTTCTATTGGAGTTTGCCATCCAGGGCCATGCCGCCCATGTGAGATACTAGATCGAATACCCTGTCACTGTGGCTTAACACAGATTTACATGCGTTGTCGAGAATTTTCTACAGCTACTGAAATAAAGCTTTCATGCAAGCAACAATGTCCTAAGAACTTAGATTGCGGCCACCGCTGCAGGAAAGTGTGTCATTCAGGAGAGTGTGGTGACCAATTATGCACTAGAAAAACCAAAGTGCACTGCCCATGTGGTAATGTGAAGAAGGAGGCCCCTTGCAACTTCATTAGAAACGGAGACATTAAGGTATTGTGTGATGAGACATGTGAAGCTAAGAAGGCTGCTGCTCAAATAGAGCAGGAGAAAGAGAAGCAGAGATTGAAAGAGTTGGAGGAAGAGAAGAATCGTAAAGAATTAGCTGAGTATGAGTGGAAATTAAGCGGCAAGAAGAAGAAGTATAAGGAGAAGAAAATGGTTGTCGGTAAAGATGACAGAGGTTTCTTGAAAAGGTATTGGGTACCAATATCATCTTTCTTAGTTATCATACTAGCAGCTTTTTATTATATATTTTATGTAGGATTAGAATAG
Protein Sequence
MARRYRDAADRLHQNVQKHLNDMKELSSSEDEDPYEASILVSIFQSYCRGGGDTNMLNRTKNLLEEAISGRSVTCLICIGSIKKSHAIWTCDHCFSYFHLSCIQKWSNDSISLRTEESTGPIAVIKQLKIEWCCPKCRNSYTKEEIPRKYRCFCGKTDDPEHQPWLVPHTCGEICGKRLSTGVNCEHKCLLLCHPGPCPPCPQTVNGICYCQKERKKVRCSAARWSCGQVCRRTLLCNTHYCENVCHPGDCPQCRYVSVQPCQCGSERAQRPCNDPFWQCKKPCNKLFSCSYHNCEKVCHWGDCGDCPNSGMLSCPCGATQRFVQCPDVMETCLGTCGKKHRGCEHRCPEKCHNGNCPPCQVLVEKKCHCSTHTRSLPCSKDFKCETKCRGMRLCGKHGCGRKCCNGNCPPCEKICDKGLQCGRHRCTNICHRGPCYPCPLESKVTCKCKETYVRVACGRERQTKPPKCNLPCQIRYKCFHTCKENKHNCHFGECPPCKAICNKQYPKCSHRCKSVCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCDTPIPVVCLGEHVTDNQPCHSATRSNCGRECGRPLACGNHQCTLLCHLHSPVPEYSNVSSTCKQCDRDCLVPRPEKCTHTCSIGVCHPGPCRPCEILDRIPCHCGLTQIYMRCREFSTATEIKLSCKQQCPKNLDCGHRCRKVCHSGECGDQLCTRKTKVHCPCGNVKKEAPCNFIRNGDIKVLCDETCEAKKAAAQIEQEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKMVVGKDDRGFLKRYWVPISSFLVIILAAFYYIFYVGLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_00274127;
80% Identity
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