Basic Information

Insect: Caradrina clavipalpis
Gene Symbol: nfxl1_1
Assembly: GCA_932526535.1
Location: OW052109.1:11596682-11599165[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 2 2.1e+04 -7.8 5.6 15 19 134 138 133 138 0.81

2 21 0.021 2.2e+02 2.2 0.2 4 10 169 175 168 176 0.96

3 21 4.3e-07 0.0045 17.2 15.8 3 19 186 202 185 202 0.95

4 21 1.6 1.7e+04 -3.8 0.6 6 10 227 231 226 231 0.78

5 21 8.8e-08 0.00092 19.4 12.2 1 19 237 255 237 255 0.93

6 21 1.7 1.8e+04 -3.9 1.9 6 10 280 284 279 284 0.83

7 21 8e-08 0.00084 19.5 10.5 1 19 290 308 290 308 0.98

8 21 8.3e-06 0.087 13.1 19.9 3 19 345 361 337 361 0.86

9 21 1.2 1.3e+04 -3.4 0.4 7 11 365 369 365 369 0.84

10 21 2 2.1e+04 -5.3 2.2 5 10 384 389 384 389 0.88

11 21 6.7e-05 0.7 10.2 20.3 1 18 395 412 395 413 0.97

12 21 4.6e-10 4.8e-06 26.7 13.7 1 19 422 440 422 440 0.99

13 21 2 2.1e+04 -4.2 0.7 5 10 468 473 468 473 0.80

14 21 0.0016 17 5.8 8.8 10 19 490 499 487 499 0.91

15 21 0.0033 35 4.8 6.2 4 12 511 519 509 519 0.90

16 21 0.41 4.3e+03 -1.9 3.4 14 18 548 552 548 553 0.85

17 21 0.22 2.3e+03 -1.1 0.2 8 12 569 573 568 573 0.79

18 21 4.3e-05 0.45 10.8 5.7 1 11 589 599 589 600 0.97

19 21 0.0014 15 6.0 15.4 9 18 637 646 629 647 0.79

20 21 2 2.1e+04 -5.1 2.4 9 13 653 657 652 657 0.74

21 21 2.8e-06 0.029 14.6 12.7 1 16 688 702 688 707 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	2	2.1e+04	-7.8	5.6	15	19	134	138	133	138	0.81
2	21	0.021	2.2e+02	2.2	0.2	4	10	169	175	168	176	0.96
3	21	4.3e-07	0.0045	17.2	15.8	3	19	186	202	185	202	0.95
4	21	1.6	1.7e+04	-3.8	0.6	6	10	227	231	226	231	0.78
5	21	8.8e-08	0.00092	19.4	12.2	1	19	237	255	237	255	0.93
6	21	1.7	1.8e+04	-3.9	1.9	6	10	280	284	279	284	0.83
7	21	8e-08	0.00084	19.5	10.5	1	19	290	308	290	308	0.98
8	21	8.3e-06	0.087	13.1	19.9	3	19	345	361	337	361	0.86
9	21	1.2	1.3e+04	-3.4	0.4	7	11	365	369	365	369	0.84
10	21	2	2.1e+04	-5.3	2.2	5	10	384	389	384	389	0.88
11	21	6.7e-05	0.7	10.2	20.3	1	18	395	412	395	413	0.97
12	21	4.6e-10	4.8e-06	26.7	13.7	1	19	422	440	422	440	0.99
13	21	2	2.1e+04	-4.2	0.7	5	10	468	473	468	473	0.80
14	21	0.0016	17	5.8	8.8	10	19	490	499	487	499	0.91
15	21	0.0033	35	4.8	6.2	4	12	511	519	509	519	0.90
16	21	0.41	4.3e+03	-1.9	3.4	14	18	548	552	548	553	0.85
17	21	0.22	2.3e+03	-1.1	0.2	8	12	569	573	568	573	0.79
18	21	4.3e-05	0.45	10.8	5.7	1	11	589	599	589	600	0.97
19	21	0.0014	15	6.0	15.4	9	18	637	646	629	647	0.79
20	21	2	2.1e+04	-5.1	2.4	9	13	653	657	652	657	0.74
21	21	2.8e-06	0.029	14.6	12.7	1	16	688	702	688	707	0.92

Sequence Information

Coding Sequence: ATGGCGCGCAGATACAGAGACGCAGCTGATAGATTGCAGCAAAACGTCCAGAAACATCTAAACGACATGAAGGACTTGTCGTCTTCTGAAGATGAGGATCCTTACGAGGCGAGCATCCTGGTAAGCATATTTCAGAGCTACTGCCGAGGCGGCGGAGATACTAACATGCTGAACAGGACTAAAAACCTCCTTGAAGAAGCAATAAGCGGTCGCTCCGTAACCTGCCTCATATGTATAGGGTCGATCAAGAAGTCTCACGCTATATGGACTTGCGATCATTGCTTTTCCTATTTCCACCTGTCTTGTATACAGAAATGGTCAAACGATAGTATAAATTTACGCAGCGAAGAAAGTACTGGCCCGATAGCTATAATGAAACAACTGAAAATCGAATGGTGCTGTCCTAAGTGCCGAAACTCTTATACTAAGGAAGAAATCCCGCGTAAATATCGTTGTTTCTGCGGAAAAACTGATGACCCAGAACACCATGCTTGGCTCATACCTCACACTTGTGGAGAAATCTGTGGAAAGAAATTGTCTTCTGGAGGCAGTTGTGAGCATAAGTGCTTGCTCTTATGTCACCCAGGTCCCTGCCCTCCGTGCCCACAGACTGTTAATGGGATATGTTATTGTCAGAAGGAGCGTAAGAAAGTGAGATGTAGTGCTTCGAAGTGGTCCTGTGGTCAAGTATGCAAGAGAACTCTTTGGTGTAATACTCATTATTGTGAAAATGTTTGTCATCCAGGTGATTGTCCCCAATGCAGCTACACCAGTGTTCAGCCATGTCAATGTGGTTCTGAGAGAGCTCAAAGACCATGCAATGATACATTCTGGCAATGTAAGAAGCCATGTAATAAATTATTTTCATGTAGTTATCATAATTGTGAGAAAGTCTGCCATTGGGGTGAATGTGGAGAGTGTCCTAATTCAGGCATGTTATCATGTCCCTGTGGTGCTAACAAGCGCTTTGTCCAATGCCCTGACGTCATGGAAACCTGCCTAGGCACGTGTGGTAAAAAGCACAGAGGATGTGAACATAAATGTCCAGAAAAATGCCATAATGGGAACTGCCCACCTTGCCAAGTTCTCGTTGAAAAGAAATGCCACTGTGCAACGCATTCAAGGTCTCTACCATGCAGCAAAGACTTCAAATGCGAGACAAAATGTAGAGGGATGAGACTATGCGGCAAACATGGCTGTGGAAGAAAGTGCTGCAACGGTAACTGCCCTCCATGTGAGAAAACTTGTGATAAAGGTCTCCAATGTGGACGGCATAGATGCACAAATATCTGTCATCGAGGGCCATGCTACCCATGCCCTTTAGAATCGAAAGTAACTTGCAAATGCAAAGAAACTTATGTAAGAGTTGCATGTGGGCGGGAACGCCACACTAAACCACCAAAGTGCAACTTGCCTTGCCAAGTTAGATACAAGTGTTTTCATGTCAGCAAAGAAAATAAACATCACTGTCATTTTGGTGATTGTCCTCCATGCAAAGCAATCTGTAACAAGCAGTATCCAAAGTGTGATCACCGATGTAAAGCAGTGTGCCATGAGTATGTTGCAGTGGTGTTCAAACAGATTGAGAAACCGGCCACCCCATGGGAAGTGCAACCACCAAAGACCAAGATTATGACCTTAGAGTGTCCTCCATGTGACACACCCGTACCAATGGTTTGCCTTGGAGACCATGAGACGAGCAACCAACCTTGTCACAGTGCCACGAGGAGCAGCTGCGGGAGAGAATGTGGACGGCCATTGGAATGTGGAAATCATCAGTGCACTTTACCCTGTCATCTTCACAGCCCTGTTCCTGAATACTCTAATGTGTCTTCCACTTGTAAGCAATGTGACAGAGATTGTTTAGTCCCGCGTCCTGAAAGGTGTACCCATCCATGTTCAATTGGAATTTGCCATCCAGGCCCATGCCCTCCATGTGAGTTACATGATCGTGTACCCTGTCACTGTGGCTTGACACAGATTTACATGCGTTGTAGAGAATTTACTACAGCTACTGAAATAAAGCTCTCTTGCAAACAACAATGTCCTAAGAACCTTGACTGTGGCCATCGTTGCCGGAAAGTGTGCCACTCAGGAGAGTGTGGTGAGCAATTATGCACTCGGAAAACCAAAATGCACTGCCCGTGTGGTAATGTGAAGAAGGAGGCTCCCTGCAATGTCATTAGAAATGGAGACGTTAAGGTACTGTGTGATGAAACATGTGAAGCTAAGAAGGCTGCTGCTAAAATAGAGCAGGAGAAAGAGAAGCAGAGATTGAAAGAGTTAGAGGAAGAGAAGAATCGTAAAGAGTTAGCTGAGTATGAGTGGAAATTAAGCGGTAAGAAGAAGAAGTATAAGGAGAAGAAGGCGGTTGTGGGGAAAGATGACAGAGGTTTCTTGGAAAGGTATTGGGTACCAATATCATCATTCTTAGTTATGATACTAGCAGCTTTTTATTATATATTTTATGTAGGATTAGAATAG
Protein Sequence: MARRYRDAADRLQQNVQKHLNDMKDLSSSEDEDPYEASILVSIFQSYCRGGGDTNMLNRTKNLLEEAISGRSVTCLICIGSIKKSHAIWTCDHCFSYFHLSCIQKWSNDSINLRSEESTGPIAIMKQLKIEWCCPKCRNSYTKEEIPRKYRCFCGKTDDPEHHAWLIPHTCGEICGKKLSSGGSCEHKCLLLCHPGPCPPCPQTVNGICYCQKERKKVRCSASKWSCGQVCKRTLWCNTHYCENVCHPGDCPQCSYTSVQPCQCGSERAQRPCNDTFWQCKKPCNKLFSCSYHNCEKVCHWGECGECPNSGMLSCPCGANKRFVQCPDVMETCLGTCGKKHRGCEHKCPEKCHNGNCPPCQVLVEKKCHCATHSRSLPCSKDFKCETKCRGMRLCGKHGCGRKCCNGNCPPCEKTCDKGLQCGRHRCTNICHRGPCYPCPLESKVTCKCKETYVRVACGRERHTKPPKCNLPCQVRYKCFHVSKENKHHCHFGDCPPCKAICNKQYPKCDHRCKAVCHEYVAVVFKQIEKPATPWEVQPPKTKIMTLECPPCDTPVPMVCLGDHETSNQPCHSATRSSCGRECGRPLECGNHQCTLPCHLHSPVPEYSNVSSTCKQCDRDCLVPRPERCTHPCSIGICHPGPCPPCELHDRVPCHCGLTQIYMRCREFTTATEIKLSCKQQCPKNLDCGHRCRKVCHSGECGEQLCTRKTKMHCPCGNVKKEAPCNVIRNGDVKVLCDETCEAKKAAAKIEQEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKAVVGKDDRGFLERYWVPISSFLVMILAAFYYIFYVGLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00932106;
90% Identity: iTF_00274926;
80% Identity: -