Basic Information

Insect: Caradrina kadenii
Gene Symbol: ZNF296
Assembly: GCA_947462355.1
Location: OX381701.1:6670908-6679440[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.1e+02 3.5 0.1 3 23 124 144 122 144 0.95

2 14 0.0018 0.1 13.1 2.8 1 23 284 306 284 306 0.99

3 14 0.0042 0.24 12.0 0.1 1 23 312 335 312 335 0.95

4 14 0.0065 0.38 11.4 1.6 1 23 340 363 340 363 0.94

5 14 1.6e-05 0.00095 19.5 1.3 2 23 539 560 538 560 0.97

6 14 0.00019 0.011 16.2 3.2 1 23 566 588 566 588 0.98

7 14 0.1 5.8 7.6 2.6 1 23 649 671 649 671 0.94

8 14 0.0012 0.07 13.7 2.3 1 23 706 728 706 728 0.96

9 14 0.00062 0.036 14.6 5.0 1 23 734 756 734 756 0.98

10 14 0.0019 0.11 13.0 5.5 1 23 765 787 765 787 0.99

11 14 0.00027 0.015 15.7 1.8 2 23 833 854 833 854 0.97

12 14 0.022 1.3 9.7 6.1 1 23 871 893 871 893 0.97

13 14 1.6e-06 9.1e-05 22.7 0.7 1 23 899 921 899 921 0.98

14 14 1.7e-07 9.6e-06 25.8 3.1 1 23 927 950 927 950 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.1e+02	3.5	0.1	3	23	124	144	122	144	0.95
2	14	0.0018	0.1	13.1	2.8	1	23	284	306	284	306	0.99
3	14	0.0042	0.24	12.0	0.1	1	23	312	335	312	335	0.95
4	14	0.0065	0.38	11.4	1.6	1	23	340	363	340	363	0.94
5	14	1.6e-05	0.00095	19.5	1.3	2	23	539	560	538	560	0.97
6	14	0.00019	0.011	16.2	3.2	1	23	566	588	566	588	0.98
7	14	0.1	5.8	7.6	2.6	1	23	649	671	649	671	0.94
8	14	0.0012	0.07	13.7	2.3	1	23	706	728	706	728	0.96
9	14	0.00062	0.036	14.6	5.0	1	23	734	756	734	756	0.98
10	14	0.0019	0.11	13.0	5.5	1	23	765	787	765	787	0.99
11	14	0.00027	0.015	15.7	1.8	2	23	833	854	833	854	0.97
12	14	0.022	1.3	9.7	6.1	1	23	871	893	871	893	0.97
13	14	1.6e-06	9.1e-05	22.7	0.7	1	23	899	921	899	921	0.98
14	14	1.7e-07	9.6e-06	25.8	3.1	1	23	927	950	927	950	0.98

Sequence Information

Coding Sequence: ATGAACCACACAGCAGCCGCAATACCTGGAAACATGGATGTTGACCCCCTGAGCTCGTACGAATACCCGGTGTACGACAACTATACCCCGCAGCCGTACTCATACCCCAACAAGCTGCAGCAGTCCATATATGAGGCGTACCAACAAACCAACGCCAACTACATGAACAACGTCCGCTCCCAGGAGGTGTTCAATAATGTAAACAATCCCTTGCCGACGTCCCAAGCGTCTGCTGACCCTCAGACACCAACTACAACTGCAGAGACAACCACTAAACCAGTTTTAAAAAAGAGGAAGAAGGAGAAAAATGGCCAGAAAAGTTCTTATTGTTCCGAGAAGATTACCGATGCTGCGTTCAAGTTCTACGGCTGTGCTGTCTGCAATGTCAGTTACAACGCACTGCACGAACTGGACCAGCACGTGACCGTCCACAAGAACAGAATGACGAGCTATAGACTGCGGTTAAGAAACCAAATTAAAAAGAAACAAATTAAAAAAGAAAAGAAAAAGTTGAAAAAGATGATCAAAATTAAAAAAGAAACCGGGTTTGAAGTTGACATCAAACCCGAGGATGGCTATATAGGAGGAGAGAAAGCGGCAGATTTTATTAATAATGAAGTTAATCCTAGTTCAGAAAGTAACAGAAGTGTTATTAGCACGAGTGGTGCGGTGCCACTACAAAATAGTGAAATTAATTCCAATAGCGAAGTGGATTCTGTAAATAATGAAACAAATTTGTTGACAAACGGGACTATGGGCAGCGAACATAATGAAACGGATACGGGGAACAGTACACATAGTAAAGAGAACAGTATGGACGAGGCCGAGTTAAATAATTTAGAGAAAATTTACAAATGTTTTGCGTGCCAGAAACAGTTCACATTAAGTTATTATTTAAAACTACACGTGAGATCGCACACAGACGAGAAGCCGTACGCGTGCGGCGCGTGCGGGCAGGCGTTCATCACGGCCAGCAAGCTCGGCCGCCACAACAAGCGCATCCACCTGGCGGAGCGCTACCAGTGCCGCGTCTGCTTCAAGATATACTCCCGGTTCGAGCTGCTGACGGCGCACTTCGACAAGACGCACCCTGAGGACAAGTTGGAGGGAGAGCCGTACGACTACAACGCGATACTGCCGTACCTGAAGGAGCTGGAGGAGCAGCTCCGCGCGCCCGAGCTCGACAGCAAGCCCAAGGTCGAAGACTTGTTCTGGGAGGAGCAGGTGGGGCCGCAGCTCACCTCAGGCCCCCGGCGGCCCGACTCGCCCTCGGGCGTCAAGCAAGAGGCGCAGGACGAGGACCAGAAGGAGCTCGTGCCGAAGCTGGACATCACCATCGAAGAGGTGAAGGTGGACTTCGACATCGATATCAAGCGGGAGGTGTCTGACGACGAGGTGGGGGGCGTGGGCGACCCTGCGGACGCGGGGGGCGGCGGCGACGAGGGGGGCGCGGACGAGGGGGGCGCCGACGACGCGGTGGGGGTCAAGGGGGAAGACAGCATGTCGGACGAGGACTACTTCCCGTCGAACACGTGGGCGGTGCCGGCGCCACCGTCGCCCCGCGCGCCCCGCTCGCCCCCCTCGCCCCGGCGGCGGGGGCGCGGGCCGGGCACGACGTGCGCGGTGTGCCACAAGAGCATCAGCAGCGCGTCGTACCTGCGCATCCACATGCGCACGCACACCGGCGAGAAGCCCTTCAAGTGCTACACGTGCGGCCGCGGCTTCATCACCAGCAGCAAGATGCACCGCCACGTGCTCACGCATGCGCAAGACAAAGACGGGGTGAAGGCAGAGGGAGACGACACCAAACCGGAAGTGGACGAACCCGACGAGCAGCAGGAAGACGGCGACAACAAACCGACGAAGAAAAAGTCCAAAATGAAGTCCAAGGCGAAGCTGGAGAACGGCGAGGCCAAGCCGCGCGGCAAGCACCAGAAGCGGCCGCACGCGTGCGACTACTGCAACCAGAAGTTCCTGCACCTGAGCATGCTGGAGGTGCACAAGCAGGCGCACGCGGGCGCGGAGCGGGTGCTGCGCTGCGGGTACTGCCTGCAGGAGGCGCCCGACGAGCCCGCCCTGCGCGCGCACGCCGCGCAGCACCAGGGCGCCAGGCCCTACCTCTGCACCGTCTGCGGCAAGACCTACAAGAAGCGGGAGACCATGGTGTACCACCGCAAGCGGCACGCGCCGGACAAGGAGTTCGTGTGCGACATCTGCTCCAAGCGCTTCAACGCGGCGTGCAAGCTGCGCAAGCACATGCACACGCACCGCGCAGACAAGTTCGTGCTGCGCTACGAGTGCCCCGTGTGCGCGCACATGTTCAACACCAAGTACCACGTGCACATGCACCTGCGCACGCACCAGAAGGAGGGGCTCATCCTCGAGGAGAACCGCAGCCAGGTGCTGGCCATGGTGCTGCAGAACGCGCGCAAGATCCCCAAGCAGCCCCCCGGCGCGCTGGGGGGGCCCCCCGCGCCGCCCGACGAGCGCTCGCGCGTCTGCAACATCTGCGGCGAGGTGTTCCACCACTTCTACTACCTGGAGGAGCACCTCAAGAGCCACGGCTCGCGCATCGCCGTGGCCGCGCCCGACGCGCCCGACGACAAGAAGTACGTGTGCACCGTGTGCCACAAGGGCTTCAAGCTGCACTACTACCTCAAGCTGCACAGCTTCACGCACTCCAAGGAGAAGCCCTTCATCTGCCAGCAGTGCGGCAAGGGCTTCATCACCAAGGGCAAGCTCAAGCGCCACCTGGAGACGCACACGGGCCTCAAGAAGTACCAGTGCCACATCTGCTACAAGTTCTTCACGCGGCCCAGCTACCTGCGGATCCACATCCGCACCATCCACGGCACGCAGGACTACAACTTCCGCTTCGACAAGAGCTACGCGCTCGTCCAGCACGCCGGGCCCGCCGCCGCCATGTCCGACCTCGGCCAGACCAGCATGTGA
Protein Sequence: MNHTAAAIPGNMDVDPLSSYEYPVYDNYTPQPYSYPNKLQQSIYEAYQQTNANYMNNVRSQEVFNNVNNPLPTSQASADPQTPTTTAETTTKPVLKKRKKEKNGQKSSYCSEKITDAAFKFYGCAVCNVSYNALHELDQHVTVHKNRMTSYRLRLRNQIKKKQIKKEKKKLKKMIKIKKETGFEVDIKPEDGYIGGEKAADFINNEVNPSSESNRSVISTSGAVPLQNSEINSNSEVDSVNNETNLLTNGTMGSEHNETDTGNSTHSKENSMDEAELNNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYACGACGQAFITASKLGRHNKRIHLAERYQCRVCFKIYSRFELLTAHFDKTHPEDKLEGEPYDYNAILPYLKELEEQLRAPELDSKPKVEDLFWEEQVGPQLTSGPRRPDSPSGVKQEAQDEDQKELVPKLDITIEEVKVDFDIDIKREVSDDEVGGVGDPADAGGGGDEGGADEGGADDAVGVKGEDSMSDEDYFPSNTWAVPAPPSPRAPRSPPSPRRRGRGPGTTCAVCHKSISSASYLRIHMRTHTGEKPFKCYTCGRGFITSSKMHRHVLTHAQDKDGVKAEGDDTKPEVDEPDEQQEDGDNKPTKKKSKMKSKAKLENGEAKPRGKHQKRPHACDYCNQKFLHLSMLEVHKQAHAGAERVLRCGYCLQEAPDEPALRAHAAQHQGARPYLCTVCGKTYKKRETMVYHRKRHAPDKEFVCDICSKRFNAACKLRKHMHTHRADKFVLRYECPVCAHMFNTKYHVHMHLRTHQKEGLILEENRSQVLAMVLQNARKIPKQPPGALGGPPAPPDERSRVCNICGEVFHHFYYLEEHLKSHGSRIAVAAPDAPDDKKYVCTVCHKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHIRTIHGTQDYNFRFDKSYALVQHAGPAAAMSDLGQTSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00809409; iTF_00273847; iTF_00810332;
90% Identity: -
80% Identity: -