Basic Information

Insect: Caradrina clavipalpis
Gene Symbol: stc
Assembly: GCA_932526535.1
Location: OW052094.1:14099273-14112097[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 2.1e+04 -4.4 1.6 15 19 595 599 594 599 0.81

2 14 0.043 4.5e+02 1.2 1.2 2 10 627 635 627 635 0.93

3 14 4e-05 0.42 10.9 18.1 4 19 643 658 641 658 0.93

4 14 1.6e-07 0.0017 18.5 11.6 1 18 694 711 694 712 0.98

5 14 2 2.1e+04 -4.1 2.4 7 11 716 720 716 721 0.89

6 14 3.9e-05 0.41 10.9 14.4 1 19 753 771 753 771 0.98

7 14 1.9e-05 0.2 11.9 12.7 1 19 812 834 812 834 0.87

8 14 2 2.1e+04 -5.4 2.2 6 10 864 868 864 868 0.94

9 14 0.0036 38 4.7 7.4 1 11 874 884 874 885 0.95

10 14 0.047 4.9e+02 1.1 0.3 4 10 889 895 888 896 0.93

11 14 6.6e-06 0.069 13.4 15.0 3 19 903 919 901 919 0.92

12 14 0.00037 3.8 7.8 9.7 10 18 966 974 963 975 0.92

13 14 4.8e-08 0.00051 20.2 14.0 1 17 1011 1029 1011 1035 0.85

14 14 0.046 4.9e+02 1.1 9.9 1 18 1041 1063 1041 1064 0.71

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	2.1e+04	-4.4	1.6	15	19	595	599	594	599	0.81
2	14	0.043	4.5e+02	1.2	1.2	2	10	627	635	627	635	0.93
3	14	4e-05	0.42	10.9	18.1	4	19	643	658	641	658	0.93
4	14	1.6e-07	0.0017	18.5	11.6	1	18	694	711	694	712	0.98
5	14	2	2.1e+04	-4.1	2.4	7	11	716	720	716	721	0.89
6	14	3.9e-05	0.41	10.9	14.4	1	19	753	771	753	771	0.98
7	14	1.9e-05	0.2	11.9	12.7	1	19	812	834	812	834	0.87
8	14	2	2.1e+04	-5.4	2.2	6	10	864	868	864	868	0.94
9	14	0.0036	38	4.7	7.4	1	11	874	884	874	885	0.95
10	14	0.047	4.9e+02	1.1	0.3	4	10	889	895	888	896	0.93
11	14	6.6e-06	0.069	13.4	15.0	3	19	903	919	901	919	0.92
12	14	0.00037	3.8	7.8	9.7	10	18	966	974	963	975	0.92
13	14	4.8e-08	0.00051	20.2	14.0	1	17	1011	1029	1011	1035	0.85
14	14	0.046	4.9e+02	1.1	9.9	1	18	1041	1063	1041	1064	0.71

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAACACTTACGCCTACAACAACCAGTACCAAGCTTGGAATGGCGACCCAAATGTCCAATATGTCAACCAAGCCTACTACCCCAATAGACCCGAGCAAGGTAATCAGTATGTGAGCTTTAATGAGTTTCTTTCTCAAATGCAAACCAGTGGTACGCCCAGCACTAGCAACTATAACAATGTCCAATATGAAAACTATCCTACAAGGCAATATGATTACCAGAATGTACCATCCACTGCTCAAAACCCCCAGTTAGACAGTTATGGATATGCTGCAACCACAGCCAATGTGTCCAGTGGCAGTGAAGCATACCCCATGAATGTTCAAAGTCAATACAACCCAGTGGCACTAAATCCTAATGCTTATACAAATGCTATGATACTCAAATCTAATCTCACTCCAACAGCTACAGAGTTTGTGCCAAAAGGTTCTATGATGACACCTTCAAGTAGCACTCAGAACATTACTGAACCTAGTACTGTACATGATGATAGTGAATCTAGAAATAATTATAGTAATGTAAATGAACCTAGGAACCAGTACAATAGTATGAATGATTCACGAAATAACTATCCTAGTGTAAGTGAACCACGAGTTACCAGTGGTAGTTCTTCAGACACAAACTGGAGAGAAAGATCACAGAGTTCACAACAAAATACTGAAACAAGCCAGAAACCTGAATCACACCAACGTCCCCAAGAAAACCCCAGAAATCAAGAATCAAATGGTCGCTTCCGTGATAACAATTATCGCTATAATGATTCAAATGGGCGATATCATGATTCAAACAACCGCACTCAAGAACCAAACAACCTCAGTCAAGAACTAGATAACAGACAGTTTGAATCAAACAGTCGGCAACAGGATTCCAGCAGTCGCAACCATGATTCTAATAACCGTAACTATGATTCAAGTAACAAAAGAGGCCAAGGAAAGGGAAATTACAAGTCAAAGAATAAAGATGATGCTCGTACCTTCTACAACAGTGCTATAAGTAAGGACAGTCAGGATGTAAGGAATGGGAGAGGAGAATCTTCAGGACGTGGAAAGAATTGGGTTGGAACTCCACGACTTCGGACAATAGAGCGTAATAATACAGAAGATGAACAATATGCCAATACTTACTTACAGGGTAGAGAAGATAGGATGGAGAGAGATAACAGAGACAGAGAGAGAGAAAGCAAAGATAGAGATAGGGAAAAAGAAATCCGAGAGAAGGACAAAGACAGCAGAGATATCCGTGAAAAGGATAGAGATAGCCGAGATAACCGTGAAAGAGACAGGGATTATCAAGACGTCCGTGACACAGAGAGAGATAGGCGTGATACTCGCGATAGAGACAGAGGCAACAGAGATATCCGCGAAAGGGATAGAGATTATCGAGATATCCGTGAGAGAGATAGAGACAACAGAAATACTCGTGACATGGACAGGGATTACCGAGATGTCCGTGAAATGGATAGAAGTAACCGAGATGTTCGCGAGAGGGACAGAGATATTAAAGAGAGGGAGAGAGCAAGCAAGTCTGAAAATTTTCCCAGTCCTGCTCGAACTAAAACTAAATATGGCAATGATCAAGTAAACAAAGAGATGACCCAACGTGAGCGTTTAACTGAACAGCTAGACAAGGGCACGCTGGAGTGCCTGGTCTGTTGCGACAGGGTCAAGCAGCATGACCAGGTGTGGTCGTGCTGCAACTGTTACCATGTGCTGCATCTGAGGTGCATCCGGAAATGGGCCATGAGCAGTATGGTTGAGGGCAAGTGGCGTTGCCCAGCCTGCCAGAACACGAACGAAGCCATCCCTACCGAGTACCGCTGCATGTGCGGCGCGATGCGCGCGCCGGAGTACCAGCGCGGCTCCACGGGGGCCCACACGTGCGGCCGCGCCTGCCGCCGCCCCCGGACCTGCCCGCATCCCTGCACGCTGCTGTGCCATCCCGGGCCCTGCCCACCCTGCCAGGCTACTGTTGTCAAACATTGTGGTTGCGGCGTAGAGACGCGCTCCATACTGTGCAGCAGCAAGTTGCCGCAGGTTTGCGGTCGCGTCTGTGGTCGCACGCTGCTGTGTGGTGTGCATAGCTGTACCAAGGAGTGCCACGAGGGACCCTGTGACATTTGCGCTGAGACTGTCGAACAAGTGTGCCACTGCCCGGCCGCCAAGTCGCGCTCGGTGACGTGCACGGCGGAGACGGGCGCGTGCGCGCACTGGTCGTGCGGCGACACGTGCGGGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCCCTGCCACGCGCCGCCCTGCCAGCCCTGCCAGCTGCTGCCGCAGTACGTGCCCAGCTGTCCTTGTGGGAACACGCAGTTGGCCAAAGACTCCCGCAAAGCCTGCACAGACCCGATCCCGTTGTGCGGCAACATTTGTGCCAAACCGTTGCAGTGCGGCCCCGCCGGGGACAAACATTTCTGCAAGCTTAACTGTCATGAAGGCCCGTGTCCGGAATGTCCCGACAAGACAGTGCTGCAGTGCCGCTGCGGGCACTCGAGCCGCGAGGTGCCGTGCGCCGACCTGCCGCAGATGTACAACAATGTACTGTGCCAAAAGAAGTGCAATAAGAAGCTGTCGTGCGGGCGGCACCGCTGCCGCACGGTGTGCTGCGCGGCGGCGTCGCACCGCTGCGCCGTGGTGTGCGGGCGCACGCTGTCGTGCCAGACGCACCGCTGCGAGGAGTTCTGCCACACCGGGCACTGCGCGCCCTGCCCGCGCGTCAGTTTCGAGGAGTTGTCGTGCTCGTGCGGCGCGGAGGTGCTGCTGCCGCCGGTGCGCTGCGGCGCGCGCGCGCCCGCGTGCTCGGCGCCGTGCACGCGGGCGCGCGCGTGCCGGCACCCGCCGCACCACTCCTGCCACGAGGGGGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCCATGGCGACCATGAGGAGCGAAAAACAATACCGTGTTCTCAAGAAGAGTTCTCGTGCGGTCTCCCGTGCGGCAAGCCACTGCCTTGCGGCAAGCACACCTGTATCAAGACCTGTCACAAGGGACCCTGCGACACTGGCAAATGTACCCAACCGTGCATGGAGAAGCGTCCGAGCTGCGGGCACCCGTGCGCGGCGGCGTGCCACGTGGCCGCCGGCACGCCGTGCCCCAGCTCCGCGCCGTGCCGCCGGCTCGTGCGCGCCACCTGCCCCTGCGCCCGCCGGCACGCCGAGCGCCCCTGCTGCGACAACGCCAGGGACTATGCTAAAATGATGAGCGCTCTAGCCGCCACGAAGATGTCAGAAGGCGGTTCCGTCGACCTGTCAGATGTACAACGCCCCGGCAGTATGCTCAAAACGCTGGAGTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGGCAGCTGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCGGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACCGCCGCGCGCGAGCCCGCCTTCGCGCACCACGTGCACGGGAAGCTCACCGACCTCGTGCAGCTCGCCAAGAAGTCCAAACAGAAGACCCGAGCGCACTCGTTCCCATCGATGAACTGGCAGAAGCGTCAGTTCATACACGAGCTGTGCGAACACTTCGGCTGTGAGAGCGTCGCCTACGACGCCGAACCCAATAGGAACGTTGTCGCTACTGCTGACAGAGAAAAGTCATGGCTTCCCGCCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGCCGCGTGCCCGGGCCCGTGCTGCGCGCGCCTGCGCAGGCGCACGGCGCTACAGCCGGCGCCGGGACTGGCGCCATTCCTAAATCGGGCTGGGCGACACTAACGTCGACCAACGCCTGGGCCGCCCGCAGCCAACCGAAGCCTCAGCAACCGCAGCAACCACAGCAACCGCCTGTTGAAAAGATCGACTATTTCGACAACCCGCCCGACAACTAG
Protein Sequence: MSQWNNTYAYNNQYQAWNGDPNVQYVNQAYYPNRPEQGNQYVSFNEFLSQMQTSGTPSTSNYNNVQYENYPTRQYDYQNVPSTAQNPQLDSYGYAATTANVSSGSEAYPMNVQSQYNPVALNPNAYTNAMILKSNLTPTATEFVPKGSMMTPSSSTQNITEPSTVHDDSESRNNYSNVNEPRNQYNSMNDSRNNYPSVSEPRVTSGSSSDTNWRERSQSSQQNTETSQKPESHQRPQENPRNQESNGRFRDNNYRYNDSNGRYHDSNNRTQEPNNLSQELDNRQFESNSRQQDSSSRNHDSNNRNYDSSNKRGQGKGNYKSKNKDDARTFYNSAISKDSQDVRNGRGESSGRGKNWVGTPRLRTIERNNTEDEQYANTYLQGREDRMERDNRDRERESKDRDREKEIREKDKDSRDIREKDRDSRDNRERDRDYQDVRDTERDRRDTRDRDRGNRDIRERDRDYRDIRERDRDNRNTRDMDRDYRDVREMDRSNRDVRERDRDIKERERASKSENFPSPARTKTKYGNDQVNKEMTQRERLTEQLDKGTLECLVCCDRVKQHDQVWSCCNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTNEAIPTEYRCMCGAMRAPEYQRGSTGAHTCGRACRRPRTCPHPCTLLCHPGPCPPCQATVVKHCGCGVETRSILCSSKLPQVCGRVCGRTLLCGVHSCTKECHEGPCDICAETVEQVCHCPAAKSRSVTCTAETGACAHWSCGDTCGRVLACGAHVCRAPCHAPPCQPCQLLPQYVPSCPCGNTQLAKDSRKACTDPIPLCGNICAKPLQCGPAGDKHFCKLNCHEGPCPECPDKTVLQCRCGHSSREVPCADLPQMYNNVLCQKKCNKKLSCGRHRCRTVCCAAASHRCAVVCGRTLSCQTHRCEEFCHTGHCAPCPRVSFEELSCSCGAEVLLPPVRCGARAPACSAPCTRARACRHPPHHSCHEGDCPPCVVLTTKRCHGDHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCMEKRPSCGHPCAAACHVAAGTPCPSSAPCRRLVRATCPCARRHAERPCCDNARDYAKMMSALAATKMSEGGSVDLSDVQRPGSMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSEHVRATAAREPAFAHHVHGKLTDLVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAPAQAHGATAGAGTGAIPKSGWATLTSTNAWAARSQPKPQQPQQPQQPPVEKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00809740;
90% Identity: iTF_00810680;
80% Identity: -