Ccla008094.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Caradrina clavipalpis
Gene Symbol
dl
Assembly
GCA_932526535.1
Location
OW052097.1:721784-759337[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-71 4.6e-68 228.7 0.2 1 169 179 350 179 350 0.97

Sequence Information

Coding Sequence
ATGCCGGTCACACGCTCGGTAGGAAGAGGCCGCAAACCTGCGAAGGAACCTTCGTCAGAAGACACCGCCACGACGTCAGCATCAGGAACCGGTACGGAAACCGGGACGACGACAACAACAGACACGACGACATCGGGAACCACCGCCGCCACGGGTACCACAGAACATACTGAGACCCCGGCATCTACAGTCAGCACCGATGCCACCGTCACCGCCGCCGCCGCAGCCGTCGCCCCCACCTCCGTCGCACCCCCTGCTCTCGTCACCGCCGCCGCCGCCGTCGCCGCCGCCCGAGCCAAAGCTATCGCCATGACCGAGGCTATCACCGCGGGTCCTCCTAAACCAGACCCGCATCAGAAGCATCCGATGAGACCGCCGCCGCCCGTCGTGGACAACAGGAAGGAAGACCTACCTGAAGAAACCGTCAAACGGGTCAAGAATACAGCGGTTGAGGCGATCACTTTGGCGGACCCGTCGTTCGGCGTGGGCGCAGGCGCCGTAGACGAGAGCATGGCGCGCCGCGACCAGCCCTACGTGGAGATCGTCGAGCAGCCGGCCAGCAAGGCGCTCAGATTTCGCTACGAGTGTGAAGGCCGGTCAGCGGGCTCGATCCCCGGCGTGAACAGCACTACGGACAACAAGACTTACCCTACTATTAAGATATGCGGCTACACGGGACAGGTGGTCATCGTCGTGTCGTGTGTCACCAAAGATGAGCCTTATAGGGCTCACCCCCACAACCTGGTGGGTCGGGAGCGCTGCGAGAGGGGGGTGTGCACCATCCCTCTCCGCGTGACGGAGGAGACGTGCGAGTACCAGTTCAAGAACCTCGGCATCCAGTGCGTCAAGCGGCGGGACATCGCGGAGGCGCTCACCGTCAGGGAGAAGCTGAGAGTCGACCCCTTTAGAAAAAATTTCGACCACAAGAACCATCCCCAAAGCATAGACCTGAACGCCGTCCGGCTATGCTTCCAAGTGTTCCTGCCGGACGAGTCGGGCCGGCTCCGGCGCCCGCTGACGCCGGTGGTGTCCGACGTCATCTACGACAAGAAGGCCATGAGCGACCTGCTCATCATGCGCTCCAGCCACTGTTCTGGGACCGCTAGGGGAGGGACGCAAGTTATTCTGCTGTGTGAGAAGGTGACCCGAGAAGACATAGAAGTAGTATTCTACCAGGAGGAGAACGGCATGGTGGTGTGGGAGGAGATGGCCATCCGCATCCTCGTGCACAAGCAGGTGGCCATCGCGTTCGAGACGCCTGCCTACAAGTTCCCTCATACCACTGACCATGTCAACGTCCACTTCCAGCTGAAGAGGCTGTCAGACAACGCTCGCAGCAACTCCTTACCGTTCGAGTACATCCCCGAGTACACAGGTACCGCGCGCAAGCCCCTCCCCGACCTCTCCCTCTTCTCCCTCCTCCTCGACAAGAGGACAGACACCAACAACAACAAGCAGGACAAGCCCGAGGTGGTGAGCTCCACCACCGACAGCGTCAGCGCCACCGTGTCCGACGAGACCGACTCCGCCACCGTCACCGACGTCAATGGGAACCTAGAGATCACTGACGTCGTCATTGACACTAATGAAAAGAGCTTAAATGAACTCCTCGATCAGGTCGCAGAGTTAGACGAGATCTACTCAGAGAACCGCACGCGCCTCGAGAATATAACCTCTATAAATAACGATAGTGAAGAAATAGAGGATTTCAATGACGCGGGAACGTACACTAGCTTGCAACTCGCTTTCAAAAACCCTGTTGAAATATCCGAACCGGATCCCATGTCGTACGAAGACGTTCAGGTCCAGACATACCGCGGTCCCATCATCGAGTTTAGTCCTTTGAAACGCGACACGGATGACGAACGCGCCCCTCCCTTGCCCCCCAAACGCGTCCGCAAAGCTGCATCTACTGAACCTTTCAAGACCAGTCAGACTTCTGTCGACAGTATCTTGAAACCTGGTCGCCAGATACCGGTCACCCGTAACCCTGATAATTTGAAAATTAACTCAGTAATGACAGTTGCTAAAAGTGAGCCTGCTTTACCCCCGGTTAAGAAACGTTCGTTCTTCTCCCGCTTGTTCAGGAGAAAGGAGAAGTCTCCTGCTCCTAGCGTGAAGTCCGAGGGTAGGAAAGAGGCGAAGAGTAAGCCTGTAGGTCGGTCAGTCAGCAGCATTTCTGGGATGCGCCCTTCGAAGTTCAAATCATCAGTTTCCCACACTTCGTTAAAAGATAATGCATCTGGGACAGGCCTCAGTTACGCTGATAGTATCACTCATATCTCGCTTCATGGAGATGAGAATGAGAAGTCGGCTTCTCAGTCATCTCTGCGTCGTCCTGCGAGCTTAGCTCCACTTCCGCCGACAGATGGCGGCACTATACTTGTAGCTGAAAGTGTGCTCGCTTTAGACGCTTCTCAGTTCAAGAAGCTACAAGACGATTTAGATCTTACAGACGCTGAACATTACGCGTTGTACATGGCAGTTGCCCCCCATGCGACCGTGTCGGAGTTCGATGAAACAAGTTGCTATTACTCGCCGATAGATGGCAGCAAGTATCAAAATAATCAATAG
Protein Sequence
MPVTRSVGRGRKPAKEPSSEDTATTSASGTGTETGTTTTTDTTTSGTTAATGTTEHTETPASTVSTDATVTAAAAAVAPTSVAPPALVTAAAAVAAARAKAIAMTEAITAGPPKPDPHQKHPMRPPPPVVDNRKEDLPEETVKRVKNTAVEAITLADPSFGVGAGAVDESMARRDQPYVEIVEQPASKALRFRYECEGRSAGSIPGVNSTTDNKTYPTIKICGYTGQVVIVVSCVTKDEPYRAHPHNLVGRERCERGVCTIPLRVTEETCEYQFKNLGIQCVKRRDIAEALTVREKLRVDPFRKNFDHKNHPQSIDLNAVRLCFQVFLPDESGRLRRPLTPVVSDVIYDKKAMSDLLIMRSSHCSGTARGGTQVILLCEKVTREDIEVVFYQEENGMVVWEEMAIRILVHKQVAIAFETPAYKFPHTTDHVNVHFQLKRLSDNARSNSLPFEYIPEYTGTARKPLPDLSLFSLLLDKRTDTNNNKQDKPEVVSSTTDSVSATVSDETDSATVTDVNGNLEITDVVIDTNEKSLNELLDQVAELDEIYSENRTRLENITSINNDSEEIEDFNDAGTYTSLQLAFKNPVEISEPDPMSYEDVQVQTYRGPIIEFSPLKRDTDDERAPPLPPKRVRKAASTEPFKTSQTSVDSILKPGRQIPVTRNPDNLKINSVMTVAKSEPALPPVKKRSFFSRLFRRKEKSPAPSVKSEGRKEAKSKPVGRSVSSISGMRPSKFKSSVSHTSLKDNASGTGLSYADSITHISLHGDENEKSASQSSLRRPASLAPLPPTDGGTILVAESVLALDASQFKKLQDDLDLTDAEHYALYMAVAPHATVSEFDETSCYYSPIDGSKYQNNQ