Cruf023456.1
Basic Information
- Insect
- Cantharis rufa
- Gene Symbol
- dsx
- Assembly
- GCA_947369205.1
- Location
- OX376303.1:97967350-97967820[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-24 2.1e-20 73.4 13.4 2 47 25 70 24 70 0.97 2 2 0.45 8.7e+03 -2.2 0.0 6 16 118 128 115 130 0.70
Sequence Information
- Coding Sequence
- ATGTCGGATAATCAAGATTTTGATTCTAAAATGGAATTAAATGCGTCGAGCACTTCGTCTACACCACGCACTCCGCCTAATTGTGCGCGTTGTAGAAATCATCGCATGAAAATTGCACTTAAAGGGCACAAAAGGTACTGTAAATATCGTTCTTGCGAATGTGAAAAGTGTCGACTAACTTCCGAGAGACAACGCGTTATGGCCATGCAAACGGCGTTGAGACGGGCACAGGCTCAGGATGAAGCTATGATGAGAACTTCGCAAAACGGTTCTGTAATCAGTCTTCCCGCAAAAAGCCCGTCTCCGCTCCAAACAATCGAACGCAGTCTCGATTGCGATTCTTCGACATCGTCTCAGTGCTCTAATAACGGAAGAAATACCATCAGAAAGATTCCTTCCATCGATGCCACACCGTCAACCACAACTGGAGTCATTGGAACAGTTGGTAAGTTATTTACATCTCAAAACTGA
- Protein Sequence
- MSDNQDFDSKMELNASSTSSTPRTPPNCARCRNHRMKIALKGHKRYCKYRSCECEKCRLTSERQRVMAMQTALRRAQAQDEAMMRTSQNGSVISLPAKSPSPLQTIERSLDCDSSTSSQCSNNGRNTIRKIPSIDATPSTTTGVIGTVGKLFTSQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00268296;
- 90% Identity
- iTF_00269833;
- 80% Identity
- -