Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720628.1:38301945-38304161[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0018 0.093 14.0 0.3 3 23 22 42 21 42 0.95

2 14 2.7e-05 0.0014 19.7 1.3 1 21 110 130 110 131 0.95

3 14 0.0027 0.14 13.4 0.6 1 23 139 161 139 161 0.98

4 14 0.00054 0.028 15.6 1.1 1 23 167 189 167 189 0.97

5 14 0.00061 0.031 15.5 2.9 1 23 195 217 195 217 0.93

6 14 0.016 0.82 11.0 4.8 1 23 223 245 223 245 0.99

7 14 8.4e-05 0.0044 18.2 0.5 3 23 410 430 409 430 0.96

8 14 4.5 2.3e+02 3.3 6.6 1 23 445 468 445 468 0.95

9 14 6.3e-06 0.00033 21.7 0.5 2 23 473 495 472 495 0.96

10 14 0.0012 0.062 14.5 0.3 1 20 505 524 505 526 0.93

11 14 0.0002 0.01 17.0 0.3 1 23 534 556 534 556 0.98

12 14 0.00082 0.043 15.1 1.1 1 23 562 584 562 584 0.95

13 14 0.00053 0.027 15.7 0.6 1 23 590 612 590 612 0.94

14 14 2.4 1.3e+02 4.1 2.4 1 23 618 640 618 640 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0018	0.093	14.0	0.3	3	23	22	42	21	42	0.95
2	14	2.7e-05	0.0014	19.7	1.3	1	21	110	130	110	131	0.95
3	14	0.0027	0.14	13.4	0.6	1	23	139	161	139	161	0.98
4	14	0.00054	0.028	15.6	1.1	1	23	167	189	167	189	0.97
5	14	0.00061	0.031	15.5	2.9	1	23	195	217	195	217	0.93
6	14	0.016	0.82	11.0	4.8	1	23	223	245	223	245	0.99
7	14	8.4e-05	0.0044	18.2	0.5	3	23	410	430	409	430	0.96
8	14	4.5	2.3e+02	3.3	6.6	1	23	445	468	445	468	0.95
9	14	6.3e-06	0.00033	21.7	0.5	2	23	473	495	472	495	0.96
10	14	0.0012	0.062	14.5	0.3	1	20	505	524	505	526	0.93
11	14	0.0002	0.01	17.0	0.3	1	23	534	556	534	556	0.98
12	14	0.00082	0.043	15.1	1.1	1	23	562	584	562	584	0.95
13	14	0.00053	0.027	15.7	0.6	1	23	590	612	590	612	0.94
14	14	2.4	1.3e+02	4.1	2.4	1	23	618	640	618	640	0.95

Sequence Information

Coding Sequence: ATGGTCGACGAAAGTGTAAAAGCGAAAAATGTCGGTAAGCGGAAAGCGGCGAAAGAAAATTCCTGTCTGGACTGCGGAAAGGTCTTCAAATACAAGaagattttggaaaaacatgcAGCCATGCACAAGGGAGAGCACCCCTACTGGTGTAAACTCTGCATGCAGAATTTTGCATCGCTCGAAGAAAAGAAACTTCACGGCTTGAACGTTCACCCTATCAAGGTCAAGAAACGGAAGTGCAAGTTGTGTCCGGATTTGCTGTTTGAAACGAAAGACGAGTTTTTTCTGCACAACACCGTCCTGCACGCCGACCATTTGTACCCCTGTTTTATGTGCAGCGACTGCGCGAAgcagtttaaaacaaaaagcgAGCTCACCCACCACATAAATTCGAAATGTGGGACGATAAAGTTGTTCCAGTGCAAAGTttgcaatttgaatttgatgaCAGCGGGGTCGTTACATAACCACATGCTGATCCACAACGGCGAACGTTCCCACATGTGCGGTTACTGTGGCAAAAGATTTCTGACGATCGGACAACTGCAGGTACACGAACGGACGCACACCCAAGACAAGGCGTTTGTTTGCGAGGTTTGTGGGAAAGGGTTCTGTCACCGTCAGAGTTTGATCACGCACAGCACATTACATACGGGAGTGAAGCCGTTCCAGTGCGAAAACTGCAGTCACGCGTTTAGTTGTGTCGGAAATTTGATGAAGCACAGACGGACGCATCCCGACACTTGCGGTTCCACCCCCGTGACCACTCACAGGGTCAACAATCCTTCGACGAagatgaaaattcaaattaacacGCCCAAGTGTGTGAAGTTGAAGACGTTGCAGAAGGAGCAGCAGTTGGAAATGAAACTGGCTGCGTATAAAGAGAAATTGGAGAAAACAAAGCAAGATAATGTGAATAAGAAGGACGTTGTAACGGGAAGTGAGTATGTCGTGAAGGAAGAAGTGGTCGAAGCTTCCTATGCCGGTCTGGAAATTAAAGTTGAAGATACGGAGTTGGAAAAACCAGATAAATTACTTGAAACCATCACGGAAAATACAATCAAGTGCGAAACTTCGAAGAATGACGATTTATCTGACGAAGACAAAAAAGACATCCGAAAGGTGCGAAAAGTGAAGATAAGGTTAAAAAGTGAAAAGGAATCCAAGGAGGAGTTCCAAAACTTCTTAAAAGATCGGGATTTAGAAAACGTCTCCGAAGCGCCGTGCAAGGACTGCGGTAAACTTTACACCAACTGGAGGTGGCTGCGGAAACACGAAAAGGAGCACGAGAAAGGAATTCTGTCAAAGGCAAAACTGAAAGACGCACGGTTCAATTGCAAGTGTTGTGGTCGTAGATTTGAAACGAAAGAAGAACACAGGCTTCACCAAAAAAAGGAACACGCTGATATATTAACATGCAACGATTGCGAAAAGGTTTTCTCCAACATGGATTCCTTGAGGTCCCACCAAAATATTTACCACAAGGGGCAACCGCGCAAACTGTACCTTTACATCTGCGAGAAGTGCGGCCTGCAGTTTCGTCAGAAGGCAATGCTGTTGCACCACGAGAGCAGCAATTGCGGGACAGGACCAATTTACCCGTGCGAAGTGTGCGGGAAGGGTTTTAGCAGTATTTACACCCGGACGTCCCATCTGAAAATTCACGATCCCAAGAAAAAGTTTCTGTGTAAATTTTGCGGCAAGGAGTTTCGGTGGAAAGGGCAGCTTAAAATTCACGAGCGCAGCCACACGGGAGAAAAACCTTTCAAATGCCTCTATTGCCCTAAAGCGTTTGCATATCGTGAGAGTTTGGTGACGCACAGCAGCCTGCACACGGGAATTAAACCGCACGTCTGCCGAGCTTGCGGTTCGAGGTTTTCCTGTGTCGGAAATTTGATCAAGCATCGAGTAACGCATGCTAATTCGTGCGGGACCTggtataacaaaaacaacaaacaagaatga
Protein Sequence: MVDESVKAKNVGKRKAAKENSCLDCGKVFKYKKILEKHAAMHKGEHPYWCKLCMQNFASLEEKKLHGLNVHPIKVKKRKCKLCPDLLFETKDEFFLHNTVLHADHLYPCFMCSDCAKQFKTKSELTHHINSKCGTIKLFQCKVCNLNLMTAGSLHNHMLIHNGERSHMCGYCGKRFLTIGQLQVHERTHTQDKAFVCEVCGKGFCHRQSLITHSTLHTGVKPFQCENCSHAFSCVGNLMKHRRTHPDTCGSTPVTTHRVNNPSTKMKIQINTPKCVKLKTLQKEQQLEMKLAAYKEKLEKTKQDNVNKKDVVTGSEYVVKEEVVEASYAGLEIKVEDTELEKPDKLLETITENTIKCETSKNDDLSDEDKKDIRKVRKVKIRLKSEKESKEEFQNFLKDRDLENVSEAPCKDCGKLYTNWRWLRKHEKEHEKGILSKAKLKDARFNCKCCGRRFETKEEHRLHQKKEHADILTCNDCEKVFSNMDSLRSHQNIYHKGQPRKLYLYICEKCGLQFRQKAMLLHHESSNCGTGPIYPCEVCGKGFSSIYTRTSHLKIHDPKKKFLCKFCGKEFRWKGQLKIHERSHTGEKPFKCLYCPKAFAYRESLVTHSSLHTGIKPHVCRACGSRFSCVGNLIKHRVTHANSCGTWYNKNNKQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00271663;
90% Identity: iTF_00271663;
80% Identity: -