Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720628.1:33402208-33404046[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0016 0.081 14.2 2.3 2 23 84 105 83 105 0.95

2 18 0.0043 0.22 12.8 2.0 1 23 111 133 111 133 0.97

3 18 0.00018 0.0094 17.1 2.4 1 23 139 161 139 161 0.97

4 18 0.028 1.5 10.2 2.4 1 23 167 190 167 190 0.94

5 18 0.00031 0.016 16.4 4.6 1 23 209 231 209 231 0.98

6 18 0.0052 0.27 12.5 2.8 1 23 237 260 237 260 0.97

7 18 0.0036 0.19 13.0 8.6 1 23 266 288 266 288 0.98

8 18 0.0019 0.1 13.9 2.1 3 23 296 316 294 316 0.96

9 18 1.8e-05 0.00096 20.2 0.7 1 23 322 344 322 344 0.98

10 18 0.0045 0.23 12.7 3.7 3 23 352 372 350 372 0.98

11 18 2.7e-06 0.00014 22.9 1.2 1 23 378 400 378 400 0.98

12 18 0.012 0.64 11.4 3.7 3 23 408 428 406 428 0.98

13 18 0.00018 0.0093 17.1 2.0 1 23 434 456 434 456 0.98

14 18 0.023 1.2 10.5 1.5 3 23 466 486 464 486 0.98

15 18 8.6e-05 0.0045 18.1 2.3 1 23 492 514 492 514 0.98

16 18 0.022 1.1 10.6 3.4 1 23 520 543 520 543 0.97

17 18 0.012 0.62 11.4 0.1 1 23 549 571 549 571 0.97

18 18 0.0015 0.077 14.2 3.7 1 23 577 600 577 600 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0016	0.081	14.2	2.3	2	23	84	105	83	105	0.95
2	18	0.0043	0.22	12.8	2.0	1	23	111	133	111	133	0.97
3	18	0.00018	0.0094	17.1	2.4	1	23	139	161	139	161	0.97
4	18	0.028	1.5	10.2	2.4	1	23	167	190	167	190	0.94
5	18	0.00031	0.016	16.4	4.6	1	23	209	231	209	231	0.98
6	18	0.0052	0.27	12.5	2.8	1	23	237	260	237	260	0.97
7	18	0.0036	0.19	13.0	8.6	1	23	266	288	266	288	0.98
8	18	0.0019	0.1	13.9	2.1	3	23	296	316	294	316	0.96
9	18	1.8e-05	0.00096	20.2	0.7	1	23	322	344	322	344	0.98
10	18	0.0045	0.23	12.7	3.7	3	23	352	372	350	372	0.98
11	18	2.7e-06	0.00014	22.9	1.2	1	23	378	400	378	400	0.98
12	18	0.012	0.64	11.4	3.7	3	23	408	428	406	428	0.98
13	18	0.00018	0.0093	17.1	2.0	1	23	434	456	434	456	0.98
14	18	0.023	1.2	10.5	1.5	3	23	466	486	464	486	0.98
15	18	8.6e-05	0.0045	18.1	2.3	1	23	492	514	492	514	0.98
16	18	0.022	1.1	10.6	3.4	1	23	520	543	520	543	0.97
17	18	0.012	0.62	11.4	0.1	1	23	549	571	549	571	0.97
18	18	0.0015	0.077	14.2	3.7	1	23	577	600	577	600	0.97

Sequence Information

Coding Sequence: ATGGATCAAAAACCTATATTGGAAGAGTTTCAACATCTAGAAGAAAGAGAAGAAGTTTTGCTAACAATTAAGACAGAAGAGCCAGATGatacgaaatttaatttggacgATTTGCATCATGCAATTGACATCAAAGAAGAAAACCTATTTCTAGAATCTCGAATAGACCAAGAATGTGATTTAGAATGTAAGGCAAATTTTGATAGTAAACCAGTGTCCTCACACATGCAGTGTGTTCAAAAGCCGATAGTATGTCGAAAATGTAACTACAAGTGTTCGAACAGCAGTGATTTGAAACTGCACGTAAAAGCTCATGTACCCGAGAAAGcttttaaatgtgaaatttgtgagtACAAAAGTTTAACCAAACATCAGTTGCTAGTACACATGCGAATTCATACCGGAGAGAAACCCTACGTGTGTACAATTTGtgacttgaaattttcacaaaaaggAGGTTTAACGAATCATTGCAAAACTCACACAGGGGTGAAACCTTTCTTGTGCGCATTATGTGACTATAAATGCGCACATAAGGGCGGATTGAAAATGCACATTTTGAGAAATCACACTGAAAATGAACCGTTTGCGTGTGAAATCAAACGAGAGGTGGCCAATGTCCGATATGCTTGTGATATATGCGACTATAAATGTGTATACAAATGTAGTTTGAAACGGCATATGATAACTCATACTGGGGATAAGCCATTCGAATGTGCGGTTTGTTCCTTTAAATGTTCATTCAAACGTAATTTGAAGCTGCATATGTTGTCCGTTCACTCTACCGATAAACCGTTTATGTgtacattttgtaaatacagATGTTCaacccaaaaatatttgaaacggCATACGAAAACTCATACCGGAGTGAAATCGATTGCTTGCGAATtgtgcgattataaatgtttggATAAAACTTACTTGACCCGGCATATGAGAACTCATACGGGCGAGAAACTATTTGTATGTACTCTTTGCGATCGTAAAATTTCAACCAAGCAACAATTGGTAATTCATATGAGAACTCACACCGGAGAGAAACCGTTCGGATGTAAACTTTGTGATCACAAGACTTCGAACAAACGTCAGTTGTTATTGCATATGAGAAATCATACAGGGGAGAAGCCGTTCGTGTGCAACGTTTgcagttataaattttcaaccaaGCAACAGCTGGTAAAACATATGATGATTCACACCGGAGATAAACCGTTTGGATGTCAAGTTTGCGATCATAGGTCTTCAACCAAATATCACTTGTTATTGCATATAACAACTCATACCGGTGAAAAACGCTTTGTATGTAACGTCTGCGATCATAAATTGTCAACTAAACAACAGTTGGTAGCTCACAAGAGAACTCACATCGGAGACAGCTCGAAACCTTTCGGTTGTAAGTTTTGCGATAGCAGGTCTTCAACCAAATATAAGTTGGACTTGCATATGAGAATCCACACCGGAGAGAAACCGTACGCTTGTCAAATTTGCGACTTCAAATGTTCACGGAAAGACAGTTTGAAAAATCATGTTATAACCCACACCGGAGAGAAACCTTTTAAGTGTGCATTATGTGACTATAAATGTGCATTCaaagacaaatttaaaatacatattttgagAAATCATACCGAAAATAAGCCGTTTGcctgtgaaatttgtgactaTAAAGGTGCAATCGAATATGCATTTAAACGGCACGTGAGAACTCACTCGGGCGAAAAGCCATTCGAGTGCGAAGTTTGCTACAATAAATATTCGCGGAAGTATCATTTGGAACAGCATATTTCGAAAAAACATTCCGATGAAAATCTGGTCATTCTCAAAAAGGACGTTTAG
Protein Sequence: MDQKPILEEFQHLEEREEVLLTIKTEEPDDTKFNLDDLHHAIDIKEENLFLESRIDQECDLECKANFDSKPVSSHMQCVQKPIVCRKCNYKCSNSSDLKLHVKAHVPEKAFKCEICEYKSLTKHQLLVHMRIHTGEKPYVCTICDLKFSQKGGLTNHCKTHTGVKPFLCALCDYKCAHKGGLKMHILRNHTENEPFACEIKREVANVRYACDICDYKCVYKCSLKRHMITHTGDKPFECAVCSFKCSFKRNLKLHMLSVHSTDKPFMCTFCKYRCSTQKYLKRHTKTHTGVKSIACELCDYKCLDKTYLTRHMRTHTGEKLFVCTLCDRKISTKQQLVIHMRTHTGEKPFGCKLCDHKTSNKRQLLLHMRNHTGEKPFVCNVCSYKFSTKQQLVKHMMIHTGDKPFGCQVCDHRSSTKYHLLLHITTHTGEKRFVCNVCDHKLSTKQQLVAHKRTHIGDSSKPFGCKFCDSRSSTKYKLDLHMRIHTGEKPYACQICDFKCSRKDSLKNHVITHTGEKPFKCALCDYKCAFKDKFKIHILRNHTENKPFACEICDYKGAIEYAFKRHVRTHSGEKPFECEVCYNKYSRKYHLEQHISKKHSDENLVILKKDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00271574;
90% Identity: -
80% Identity: -