Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720628.1:30220077-30221981[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00045 0.024 15.9 0.2 1 23 64 86 64 86 0.98

2 18 0.00044 0.023 15.9 0.6 1 23 92 114 92 114 0.97

3 18 0.05 2.6 9.4 0.4 1 23 120 143 120 143 0.96

4 18 0.00033 0.017 16.3 5.5 1 23 149 171 149 171 0.97

5 18 0.0018 0.092 14.0 6.3 1 23 177 199 177 199 0.98

6 18 0.22 11 7.4 0.4 3 23 207 228 205 228 0.96

7 18 7.5e-05 0.0039 18.3 4.4 1 23 234 256 234 256 0.99

8 18 7.3e-06 0.00038 21.5 3.2 1 23 262 284 262 284 0.98

9 18 0.028 1.5 10.2 1.0 1 23 290 313 290 313 0.96

10 18 0.021 1.1 10.6 0.4 1 23 319 342 319 342 0.96

11 18 0.00058 0.03 15.5 1.4 1 23 348 370 348 370 0.98

12 18 6.5e-05 0.0034 18.5 2.8 1 23 376 398 376 398 0.97

13 18 0.00035 0.018 16.2 1.0 1 23 404 427 404 427 0.97

14 18 0.00062 0.032 15.4 2.9 1 23 433 455 433 455 0.98

15 18 0.00093 0.049 14.9 4.5 1 23 461 483 461 483 0.98

16 18 0.0014 0.073 14.3 2.6 1 23 489 511 489 511 0.98

17 18 0.0072 0.37 12.1 3.1 1 23 517 540 517 540 0.96

18 18 0.029 1.5 10.2 4.3 2 23 547 568 546 569 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00045	0.024	15.9	0.2	1	23	64	86	64	86	0.98
2	18	0.00044	0.023	15.9	0.6	1	23	92	114	92	114	0.97
3	18	0.05	2.6	9.4	0.4	1	23	120	143	120	143	0.96
4	18	0.00033	0.017	16.3	5.5	1	23	149	171	149	171	0.97
5	18	0.0018	0.092	14.0	6.3	1	23	177	199	177	199	0.98
6	18	0.22	11	7.4	0.4	3	23	207	228	205	228	0.96
7	18	7.5e-05	0.0039	18.3	4.4	1	23	234	256	234	256	0.99
8	18	7.3e-06	0.00038	21.5	3.2	1	23	262	284	262	284	0.98
9	18	0.028	1.5	10.2	1.0	1	23	290	313	290	313	0.96
10	18	0.021	1.1	10.6	0.4	1	23	319	342	319	342	0.96
11	18	0.00058	0.03	15.5	1.4	1	23	348	370	348	370	0.98
12	18	6.5e-05	0.0034	18.5	2.8	1	23	376	398	376	398	0.97
13	18	0.00035	0.018	16.2	1.0	1	23	404	427	404	427	0.97
14	18	0.00062	0.032	15.4	2.9	1	23	433	455	433	455	0.98
15	18	0.00093	0.049	14.9	4.5	1	23	461	483	461	483	0.98
16	18	0.0014	0.073	14.3	2.6	1	23	489	511	489	511	0.98
17	18	0.0072	0.37	12.1	3.1	1	23	517	540	517	540	0.96
18	18	0.029	1.5	10.2	4.3	2	23	547	568	546	569	0.94

Sequence Information

Coding Sequence: ATGGATCAAAAAGTATATGTGGAAGAGTCCCAcagtttggaaaaaaatattagctgtgaaattaaaacagaacCCGAAGATGCAACATTCGGCAACGAGGACTTGCATCACTCAATTGACATCAAAGAAGAAAGCTCTTTACTGGAATCTCAACAAAGTGAAGAAAACAAAGTACAAATTTATCAGCAATTCGAATGTGATATATGCAagattaactttttcaatgaACCCCAACTGGTAAAACATTTAGAAACACATTCCGTGAAAAAACCATTTGCATGTGGAGTTTGTAGTTATACAAGCTCTCGGAGGGGATATTTGCAGGATCATTTAAAAACCCATACCGGGGAGAAACCGTATGCGTGTGAAATGTGCAATTATAAAGGTTCGctgaaacaaaaactaaagGAGCACATAATCAGGCTTCATACTAACCGGAAACCATTTTTCTGTCagatttgtgattataaatgttcgtTTACCCAGGATTTGAAACGGCATATGAGAACTCACACGGGTGAGAAACTGTTTGCATGTAAAGTTTGTAATCATAAATGCTCGGTCAAACGAGATTTTCAACGACACATCAGAACTCACACCGGGGAGAAACCGTTTGGTTGCAAAGCTTGCGACAATAAATATTCAGCCAAGCGTGAATTGAAATTGCATATTTTGAAGGCTCATTCTGGTGAGCAACCGTTTAAATGTGAagtttgcgattataaatgttcagTGAAACAACATTTGGTGATTCATATGCGGACTCATACTGGGGAGAAACCATTTTCCTGTGAAGTCTGTgagtataaattttcaaaccgaCATCAATTGACAGGGCATATGAGAACTCACACCGGTGAGAAACCGTTTGCATGTGAATTTTGTGACTATAAAAGTTCATTCAAACAGGTATTGAAGCagcatattatgaaaattcatACCGGTGAAAAACCGTTTGCTTGTGATATGTGTGATTCTAAATTTACAATCAAGCAGGTGTTGAAACAGcatattttaagaattcacattggtaaaaaaatgtttgcgtgtgaaatttgcgattataaatgtgcaATTAAACAGTATCTGGTAACGCATATGAGAACTCATTCCATTGATAAACCATTtgcatgtgaaatttgtgactaCAAATGTTCGATTAAGGAATATTTGAGACGGCATATGAAAACTCATACGGGCATCAAACCGTTTGTCTGTGACCTTTgcgaattgaaattttcggtGAAGCATACATTGAACCAGCATATTCTAAGAGCCCATGCTGAAGGAAAGCCTTTTAGTTGCGAAATTTGTGAGTATAAATGTTCGGTCAAGGAAGACTTGAAACGGCATTCGAGAAGTCATAACTGCGAGAAACAGTTTTCTTGCGATATTTGCGACTACAGATGTTACATGAAGCAACATCTGGTGTCGCACATGAGAGTTCACACCAGCGATAAACCTTTTGTGTGCAGATATTGTGATTATAGATGTTCACGAAGAGGACGTTTAATAgatcatttaaaaatccattcaACAGAGAAACCGTTTGCATGTAATATGtgtgattgtaaattttcattcaagCGAGTACTGAAACAGCATGTTATGAGAATTCATATTGACGAAAAAATGATTAAGTGTGAATTATGTAACTACAAATGTTCGATCAAGCAAGATTTGAAACGCCACGTCAAAGCTCATCATAGCGATAAACAGTTTGCTAATGAAATTGGTGATTACGAAACCAAGTGGGCACCGGTTTTAAACCTAAATTGTGAGTCTAATTCAGTGCGTCAGGAGTTTCCTTATGTAAAGAATGAATCAAATTATTCTGTAACTATTACCGATCTTCCTATAAAAACAGAGGCTGTAAGTTTCATAAAGGAAGAATTTGTTACGTAA
Protein Sequence: MDQKVYVEESHSLEKNISCEIKTEPEDATFGNEDLHHSIDIKEESSLLESQQSEENKVQIYQQFECDICKINFFNEPQLVKHLETHSVKKPFACGVCSYTSSRRGYLQDHLKTHTGEKPYACEMCNYKGSLKQKLKEHIIRLHTNRKPFFCQICDYKCSFTQDLKRHMRTHTGEKLFACKVCNHKCSVKRDFQRHIRTHTGEKPFGCKACDNKYSAKRELKLHILKAHSGEQPFKCEVCDYKCSVKQHLVIHMRTHTGEKPFSCEVCEYKFSNRHQLTGHMRTHTGEKPFACEFCDYKSSFKQVLKQHIMKIHTGEKPFACDMCDSKFTIKQVLKQHILRIHIGKKMFACEICDYKCAIKQYLVTHMRTHSIDKPFACEICDYKCSIKEYLRRHMKTHTGIKPFVCDLCELKFSVKHTLNQHILRAHAEGKPFSCEICEYKCSVKEDLKRHSRSHNCEKQFSCDICDYRCYMKQHLVSHMRVHTSDKPFVCRYCDYRCSRRGRLIDHLKIHSTEKPFACNMCDCKFSFKRVLKQHVMRIHIDEKMIKCELCNYKCSIKQDLKRHVKAHHSDKQFANEIGDYETKWAPVLNLNCESNSVRQEFPYVKNESNYSVTITDLPIKTEAVSFIKEEFVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00271563;
90% Identity: -
80% Identity: -