Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720625.1:6525724-6528233[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.19 10 7.6 6.1 2 23 86 107 79 107 0.95

2 19 6.6e-06 0.00034 21.7 3.5 1 23 113 135 113 135 0.98

3 19 5.3e-06 0.00027 22.0 4.5 1 23 141 163 141 163 0.98

4 19 1.4e-05 0.00074 20.6 0.1 1 23 169 191 169 191 0.97

5 19 0.0003 0.016 16.4 1.3 1 23 197 219 197 219 0.98

6 19 8.3e-07 4.3e-05 24.5 2.2 1 23 225 247 225 247 0.99

7 19 2e-05 0.001 20.2 6.1 1 23 253 275 253 275 0.98

8 19 0.034 1.7 10.0 9.1 1 23 281 303 281 303 0.99

9 19 0.00027 0.014 16.6 2.9 1 23 309 331 309 331 0.98

10 19 0.00062 0.032 15.4 2.8 1 23 337 359 337 359 0.97

11 19 0.00018 0.0094 17.1 1.9 1 23 365 387 365 387 0.98

12 19 4.9e-05 0.0025 18.9 3.1 1 23 397 420 397 420 0.96

13 19 2.7e-05 0.0014 19.7 2.7 1 23 426 448 426 448 0.99

14 19 4.1e-05 0.0021 19.2 1.5 1 23 454 476 454 476 0.98

15 19 4.1e-05 0.0021 19.2 2.5 1 20 482 501 482 505 0.91

16 19 1.2 63 5.1 5.2 1 23 516 538 516 538 0.98

17 19 1.6e-05 0.00081 20.5 4.8 1 23 544 566 544 566 0.98

18 19 0.00024 0.013 16.7 1.9 3 23 574 594 572 594 0.96

19 19 0.0028 0.15 13.4 0.1 1 23 600 623 600 623 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.19	10	7.6	6.1	2	23	86	107	79	107	0.95
2	19	6.6e-06	0.00034	21.7	3.5	1	23	113	135	113	135	0.98
3	19	5.3e-06	0.00027	22.0	4.5	1	23	141	163	141	163	0.98
4	19	1.4e-05	0.00074	20.6	0.1	1	23	169	191	169	191	0.97
5	19	0.0003	0.016	16.4	1.3	1	23	197	219	197	219	0.98
6	19	8.3e-07	4.3e-05	24.5	2.2	1	23	225	247	225	247	0.99
7	19	2e-05	0.001	20.2	6.1	1	23	253	275	253	275	0.98
8	19	0.034	1.7	10.0	9.1	1	23	281	303	281	303	0.99
9	19	0.00027	0.014	16.6	2.9	1	23	309	331	309	331	0.98
10	19	0.00062	0.032	15.4	2.8	1	23	337	359	337	359	0.97
11	19	0.00018	0.0094	17.1	1.9	1	23	365	387	365	387	0.98
12	19	4.9e-05	0.0025	18.9	3.1	1	23	397	420	397	420	0.96
13	19	2.7e-05	0.0014	19.7	2.7	1	23	426	448	426	448	0.99
14	19	4.1e-05	0.0021	19.2	1.5	1	23	454	476	454	476	0.98
15	19	4.1e-05	0.0021	19.2	2.5	1	20	482	501	482	505	0.91
16	19	1.2	63	5.1	5.2	1	23	516	538	516	538	0.98
17	19	1.6e-05	0.00081	20.5	4.8	1	23	544	566	544	566	0.98
18	19	0.00024	0.013	16.7	1.9	3	23	574	594	572	594	0.96
19	19	0.0028	0.15	13.4	0.1	1	23	600	623	600	623	0.93

Sequence Information

Coding Sequence: ATGGACTCGACGAATTTAACATCCGATATTTGTATTAAGCAAGAAGTTACAGATTGCGGTAATATCAAACAAGAAGACCGCAATGGTAATACTACAACAAGAAATCAATTAGTTGGTTCATATGAAAATCTTAAAGTTGAAACTGTCaagttagaaaatatttctgaaGTAGAAAGCGTTGCGGGTGATATTGATCCTGTCGTTGTAATCAAAGATGAATTATCAAGTGACCTCTACAAATGCAACAAAGTACGTACGTGTCAGTTCTGTACTAAAACATTTCAGTGTGATTCTCAACTCAACGTTCACATGAGGTCGCACACCGATTTTCGACCGTTTTCATGTCACGTCTGTTCTAAATCGTTTAAAGACGTTTCCACTCTTAACTCTCACTTGAAAACTCATTCGTCAGAAAGGCCGTTTAATTGTGAATCCTGCAGTAAATCCTTTAAACTTAATTCACACCTCCAGCGACACATTAGGACTCACAATGGTGAAAAACCGTTCAAGTGTGCTGAATGTCCGAAAGCATATACCACTAAACGGGCGTTAACTAACCATATAATCGGTCACTTAGGCACCAAACCATTCAGTTGTCTTGTTTGTTCCAAAACTTTCAAGAACGAAAAGTCTTTACCGGATCACATGAAAACTCATACAGGGGAAAAGCCATTCACATGCGAATTTTGCAATAAGGCGTTTAGGCAGAAACAACAGTTGACGGTGCACATTAAGACGCATACAGACGAAAGACCCCACAAGTGCGACGTTTGCTTGAAATCGTTTCGGGATAAAAGAACGTTGACGCATCATATCAGAACTCACACTGGCGAAAAGCCGTACAAATGCGAGCATTGCGATTTTCGTTGTGCGAAAAAGCACACGTTAACCGTTCACTCTCGCCGACACACCGACGAAAAGCCATACGAATGTACCTACTGCTGTAAGCGATTCGCACAAAGCAGCAGCCTGGTGGCTCATCGTCGACTGCACACTGGTGAAAAACCCTACGTTTGTGATCAGTGCGGCCAAAGATTTACCCTAAAATATAGTTTAAGATATCACAAATATCGGCACGACGGAGTTCGAGCTTATAAGTGCGAATTTTGTGGCAGCACCTTTTTTACTCCCTTCTCGTTGAAAGCTCATCGAAAGTTACACTTTGCTATTAAACCAAAGAAAGCAATTTATGATTGCAAAATATGTGATAAGTTTTATTCGTCGCGCTCATCGTTAAAATTACATCACCTGCGTgtccatataaaattaaaaaagtttaaatgcaCTTTGTGCCAGAGTGCTTTTGTTCACACCGCCGAACTGAAACGCCACATGAGAACACATACCCGTGAGAAAAACCACAAATGTGAAATAtgcgaaaaattattttccgcCAAACAAAGTTTGAGAATTCACATGAGGATCCACAACGGTGTAAAGCCCTACAAATGTAAATACTGCTCTAAGGCTTTCTCAACAAGCACGCAGTTAAAAGTTCACAACGTGAATTTTCATTTCGACTTGATTAGTGAGGATGTTAATCCATACAAGTGTAATCAGTGCAGTTACACGACGTTACATAAGATTTACTACAAACGCCATTTGGTGACGCATTTCGGGATTAAATTGTATAAGTGTTACATCTGCAATAAATCGTTCACCAGATTATATACCTTAAAACTGCACATACAACATCACACCGATCAAAGTAACTTGGATTGTTTACACTGTAAAGAAAGTTTTCCCTCCAAGATGCTGCTACGAAAGCACCTGAAGGTACATAGAAATCCTAAGCGATACAAATGCACTTTGTGCTTGAAGGCGTTTGTTACTTCGACTGTTTTGAACATGCACATTGCAGGAGTTCACAATAAAATGCGAGCGTTTAGATTCAAACCATGTCCAATAGCGTTTGAAATTCCGTTGGGTCCAACAGCACCGTATCCAGTTACAACACCAGCCGGTCCAGCAGCTCCGTTACTGGACACTACGCCTGAAGCTCCAACTAATGGAAGATGA
Protein Sequence: MDSTNLTSDICIKQEVTDCGNIKQEDRNGNTTTRNQLVGSYENLKVETVKLENISEVESVAGDIDPVVVIKDELSSDLYKCNKVRTCQFCTKTFQCDSQLNVHMRSHTDFRPFSCHVCSKSFKDVSTLNSHLKTHSSERPFNCESCSKSFKLNSHLQRHIRTHNGEKPFKCAECPKAYTTKRALTNHIIGHLGTKPFSCLVCSKTFKNEKSLPDHMKTHTGEKPFTCEFCNKAFRQKQQLTVHIKTHTDERPHKCDVCLKSFRDKRTLTHHIRTHTGEKPYKCEHCDFRCAKKHTLTVHSRRHTDEKPYECTYCCKRFAQSSSLVAHRRLHTGEKPYVCDQCGQRFTLKYSLRYHKYRHDGVRAYKCEFCGSTFFTPFSLKAHRKLHFAIKPKKAIYDCKICDKFYSSRSSLKLHHLRVHIKLKKFKCTLCQSAFVHTAELKRHMRTHTREKNHKCEICEKLFSAKQSLRIHMRIHNGVKPYKCKYCSKAFSTSTQLKVHNVNFHFDLISEDVNPYKCNQCSYTTLHKIYYKRHLVTHFGIKLYKCYICNKSFTRLYTLKLHIQHHTDQSNLDCLHCKESFPSKMLLRKHLKVHRNPKRYKCTLCLKAFVTSTVLNMHIAGVHNKMRAFRFKPCPIAFEIPLGPTAPYPVTTPAGPAAPLLDTTPEAPTNGR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00271522;
90% Identity: iTF_00272979;
80% Identity: -