Basic Information

Insect: Cantharis flavilabris
Gene Symbol: salm
Assembly: GCA_949152465.1
Location: OX424435.1:25521843-25529518[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.1e-05 0.00068 21.0 0.9 1 23 375 397 375 397 0.98

2 9 1.5e-05 0.00093 20.6 1.9 1 23 403 425 403 425 0.98

3 9 0.13 8.5 8.1 3.8 2 23 730 751 729 751 0.98

4 9 9.1e-07 5.9e-05 24.4 1.0 1 23 757 779 757 779 0.97

5 9 0.00013 0.0082 17.6 2.6 1 23 789 811 789 811 0.98

6 9 0.044 2.8 9.7 4.1 2 23 1071 1092 1070 1092 0.97

7 9 7e-07 4.5e-05 24.8 1.3 1 23 1098 1120 1098 1120 0.99

8 9 2.9e-06 0.00019 22.8 4.0 3 23 1204 1224 1202 1224 0.96

9 9 4.2e-07 2.7e-05 25.5 0.9 1 23 1230 1252 1230 1252 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.1e-05	0.00068	21.0	0.9	1	23	375	397	375	397	0.98
2	9	1.5e-05	0.00093	20.6	1.9	1	23	403	425	403	425	0.98
3	9	0.13	8.5	8.1	3.8	2	23	730	751	729	751	0.98
4	9	9.1e-07	5.9e-05	24.4	1.0	1	23	757	779	757	779	0.97
5	9	0.00013	0.0082	17.6	2.6	1	23	789	811	789	811	0.98
6	9	0.044	2.8	9.7	4.1	2	23	1071	1092	1070	1092	0.97
7	9	7e-07	4.5e-05	24.8	1.3	1	23	1098	1120	1098	1120	0.99
8	9	2.9e-06	0.00019	22.8	4.0	3	23	1204	1224	1202	1224	0.96
9	9	4.2e-07	2.7e-05	25.5	0.9	1	23	1230	1252	1230	1252	0.98

Sequence Information

Coding Sequence: ATGCAAGAAGATTTTAATGTGTACGAACGAACATCTTTATCGTCCGAGGAAGGGAGTACTGTAGTCGCCGGAGCAGGGGAAGAATTAACAGAAGTTGGTGTGCTCGTATGTTCACGCTGTCAAgaacaatttacaatttttcacgAATACATTCAACATAAAGccatttgttgtaaaataaatcaagaaGAACCGGCACCTTCCGAGCCCGACGACGCAGCGGTTTCGGAAAACGAAGAAGATGCAGAATCTGGCGGAAAGCAACTCGAACAAGTCAGAAAACATCGTCAAGATGCGGCAAACAATAACAGCCTTGAAGAAAGTTCGCctgaagacaatgaaaattcTAGTTTAAGTTTTCAATTTCCCGCTTCAACAGGTCACGTTACCCTAGAGGCACTACAAAATACTAAAGTTGCTGTAGCCCAGTTTGCAGCTACGGCGATGGCTAACAATCCAGGAAACGAAGCGGCAATACAAGAATTAGCAATGTTACAATCGACGTTATTTACACTTCAGCATCAGCAAGTATTTCAATTGCAACTAATTAATCAATTGCAACAGCAACTTTCTTTAAATAGAGTGAATCCAAAAACATCTTCGTCGCCTTCGCCTAAAATGGAATTGGCCGACGATTCATCTGTACATTCGTCTCCCTCGCCGCCACCAATTATGGAAACGCACAACAAAAGCGATTCGCCAATTATAACTCCAATTTTGCCTCCGACTCAAATCAAACGCGAGTGTTCCCCGGTTTTGAAAGAACCCATGCCAATGCCAGCATCATTACCGCCCCCAATTAGTCAACCTCTCGAACCAACACAACCTCTTACCACTACCGATACGTGTACAGAAATACCGATTCCATTGTCAACATGTCTTTCCATTCAACCACCTCTATGTTCAATATCGGCTTCGTTAGCATCAACCATAATAACTCACAATAACGAACCCCCTACCGAGGAGGAACCGAATACTTTGGAAATGTTACAAAAACGTGCACAAGAAGTATTAGATAATGCTAGTCAAGGATTGTTGGCCAATAATTTAGCCGACGAACTAGCGTTTAGAAGAAAAGATTCTTTATCCTATGACAAGGGAAGGAACGAACCGTTTTTTAAACATAGGTGTAGATATTGTGGAAAAGTGTTTGGATCAGACTCTGCACTACAAATACATATCCGATCTCATACTGGTGAACGTCCATATAAGTGTAACGTTTGTGGCAGCAGATTTACAACCAAGGGTAATTTAAAAGTTCACTTTCAAAGACATTCTGCCAAATTTCCGCATATCAAAATGAATCCTAATCCCGTTCCGGAACATTTAGATAAGTACCATCCTCCATTATTAGCACAATTAGGTCAACAATCTGCATTATCGCCGGGCGGGCCTCCACATCATCCTCCTCACGGTTTTCCAGGAAGTTCACCATTCCCATCTTCATCAATTCCAATGTACAGACCCCCAGGACCACCGCAAGatttaataaacaatagatTACAGCCTACACCCATCAGACCGCAAGAAGCTGCTTTAAGAATATTTCATCCGCATCCTATTTTTATGAAACCAGAAGAGCAAGATTTGCCGGAAAATTTAAGTAAACCAAATAGTAGATCTCCAGTTCCTCAAGAAACCGATACTAAATCGGAAACGGAAAACGAAAAACAAGAATTAGATGAGCATAGAACAGAACTTATTGTTCCTAGAATAACACCAAAACAAGAAATGGATATCGACGAACCCGAACACGAATCGGAAAGATTTCCATCGCCTCCGCCGTTCGACGAATGTAGTACGGATAGCAAATACAGTAACGAAGACTTATTAGAACCCAGATCTCCGATTAATCATAGTGATAGTATACAAGATGAACCGGAAAACTTATCAAACAAAAATAGCTCAATTACGATTCCTCTTAGTATATCCACGGCACAAAGACTACCAGCAAATTTTCCTTTCGGTCAAACAAATTCGCCACCAAGCAGTACATCGTCGGGTAGTTTAGGTTCCTTTCCGCACATAGATCCCGCAAAAGATCCAACAATTTATACACATTTATTGCCTAGACCAGGTAGTAACGATAATTCGTGGGAGAGTTTAATAGAAATTACCAAAACTTCCGAGACAGCAAAACTTCAACAGTTAGtggataatattgaaaacaaattaaccGATCCAAATCAGTGCGTAATATGTCATCGAGTTTTATCGTGTAAAAGTGCATTGCAAATGCATTATCGAACTCACACCGGCGAACGGCCCTTTAAGTGTAAAATTTGTAGTCGGGCTTTTACGACGaaaggtaatttaaaaactcataTGGGAGTTCATCGAGCTAAACCACCAATGAGAGTTCTACACCAGTGTCCGGTGTGTCATAAGAAATTTACAAATGCACTTGTGTTACAACAACATATACGTTTGCACACGGGCGAACCTACTGATCTCACTCCAGAACAAATTCAAGCCGCCGAAGTTAAAGAATTACCTTCTCCGGGAGGATTTCCGTCGCTTCATAATTCCATGAATCCATTCCTTAATCACAACATTTCACTTCCCGGTTTATCTCCACTAGGATCTGGTCAGTTTccttttaatatgaaatttggCGATTCAGATATGAAATCGGAAAACGATTATATGGATGAAGACGACATCGACGATGACGACATGAGTACATCCGAACATAACAATTTTCCAACGTCGCCGGGTATGTCTGAGAATCATATTCCCACCACCACCACGCCGCAGTATTCGACATCTTCGGGAATTAGTTATTCTGCAGAAGACCTGTGTTCCAGAATGATCAATTCGTCACCTCCCATGATGAACGGCGATAAATCACCTGCACAATCTGGAATGACCAGTCCGGGCAGCTCCGATATTCGTTCATCTCCAATTCACAGATCTACACCCGTCCAGATACCACGACCACCGTCATCTCAGCAACCCGGCAGTCCCACGCCGTCAGATACAAATTCATTAGGAGCATTGGACCTCACACGTTCATCGCAACCACTTTTGCCAACTTCAGGTCAAAACATCATTCCTTCGTCGTTATTTACTAACTTCGGTCTTCTACCTCCTTCACAAGCGACCACTCCACTAATGTCTTCTGCGCTATCTTCACTGACGACTACGGTGCTGACATCGACTCCTTTCAATCCTCTTGGGTTGATGTCTCCTGCAGGTCGTGGAAATACCACGTGCAATATTTGCTTCAAAACCTTTGCTTGCCATTCAGCTCTCGAAATTCATTATCGAAGTCACACAAAGGAACGACCTTTCAAGTGCAACGTCTGCGATCGAGGATTTTCGACAAAGGGAAATATGAAGCAGCATATGTTAACGCATAAAATTCGTGATATGCCTCAACACATGTTCGAAAAACCTCCAATCAAACTCGAAGAACCTCCAGCACCGCAACCTGTCGAAATTCAACCGCCGCCGCCGGAGCCCGAAAAACCGAGAGAACCGATTCCACTTCCCGTGCAAGTACCAGAACCTCCGCCACCAAGTGAGTCACTGCCTAAAAGAGCGCCAACCGAAATCGAGATGCCCTTACCCAAACGTCCTCCGAGCTTGCAGGGCAGTAAACACTTGTGCCACGTGTGTAATAAGAACTTCTCATCAAGCTCGGCCTTGCAGATACACATGCGAACACATACGGGTGACAAACCATTCCGATGTACCGTTTGTCAGAAGGCCTTCACTACAAAGGGTAACTTAAAGGTTCATATGGGTACGCATATGTGGAGCAATGGAGCCTCGCGCAGAGGCCGTCGCATGTCCTTAGACCTACCACCCATTCCGATGACTCCCAAGGATTCCGAATTTCTGCAACGAAGGCCAGATCTTTTTTACCCATATCTCCCAGCTCCGTTCCTTAACGGCATGCAGCAAAAGATGAACGAGATATCGGTCATTCAAAACTCACACAATGGTTTAGTGGGAGCTGGAAAGTATAGCGGATTTCTAGGATTTAGTTATCCTCCATCCGAACAAATGCGCTCAAATGTAAACTCTCCCGAACGAAGTAGTTCTCCTAATAGGGATTCAGAGCGACTGTGGGATTTGCATTTTGATCGTAAGTCGACAAGTGAATCAGCCCATGAAGAATTAATACCGCCTAGTCGCGAAGGACTAGCTGCATGA
Protein Sequence: MQEDFNVYERTSLSSEEGSTVVAGAGEELTEVGVLVCSRCQEQFTIFHEYIQHKAICCKINQEEPAPSEPDDAAVSENEEDAESGGKQLEQVRKHRQDAANNNSLEESSPEDNENSSLSFQFPASTGHVTLEALQNTKVAVAQFAATAMANNPGNEAAIQELAMLQSTLFTLQHQQVFQLQLINQLQQQLSLNRVNPKTSSSPSPKMELADDSSVHSSPSPPPIMETHNKSDSPIITPILPPTQIKRECSPVLKEPMPMPASLPPPISQPLEPTQPLTTTDTCTEIPIPLSTCLSIQPPLCSISASLASTIITHNNEPPTEEEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRRKDSLSYDKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPYKCNVCGSRFTTKGNLKVHFQRHSAKFPHIKMNPNPVPEHLDKYHPPLLAQLGQQSALSPGGPPHHPPHGFPGSSPFPSSSIPMYRPPGPPQDLINNRLQPTPIRPQEAALRIFHPHPIFMKPEEQDLPENLSKPNSRSPVPQETDTKSETENEKQELDEHRTELIVPRITPKQEMDIDEPEHESERFPSPPPFDECSTDSKYSNEDLLEPRSPINHSDSIQDEPENLSNKNSSITIPLSISTAQRLPANFPFGQTNSPPSSTSSGSLGSFPHIDPAKDPTIYTHLLPRPGSNDNSWESLIEITKTSETAKLQQLVDNIENKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICSRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVKELPSPGGFPSLHNSMNPFLNHNISLPGLSPLGSGQFPFNMKFGDSDMKSENDYMDEDDIDDDDMSTSEHNNFPTSPGMSENHIPTTTTPQYSTSSGISYSAEDLCSRMINSSPPMMNGDKSPAQSGMTSPGSSDIRSSPIHRSTPVQIPRPPSSQQPGSPTPSDTNSLGALDLTRSSQPLLPTSGQNIIPSSLFTNFGLLPPSQATTPLMSSALSSLTTTVLTSTPFNPLGLMSPAGRGNTTCNICFKTFACHSALEIHYRSHTKERPFKCNVCDRGFSTKGNMKQHMLTHKIRDMPQHMFEKPPIKLEEPPAPQPVEIQPPPPEPEKPREPIPLPVQVPEPPPPSESLPKRAPTEIEMPLPKRPPSLQGSKHLCHVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWSNGASRRGRRMSLDLPPIPMTPKDSEFLQRRPDLFYPYLPAPFLNGMQQKMNEISVIQNSHNGLVGAGKYSGFLGFSYPPSEQMRSNVNSPERSSSPNRDSERLWDLHFDRKSTSESAHEELIPPSREGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00399812;
90% Identity: iTF_01292403;
80% Identity: -