Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424437.1:5222472-5223953[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.1e-05 0.002 19.6 2.6 1 23 43 65 43 65 0.99

2 16 4.5e-06 0.00029 22.2 2.6 1 23 71 93 71 93 0.98

3 16 0.004 0.26 12.9 1.3 2 23 100 121 99 121 0.92

4 16 9.6e-06 0.00061 21.2 3.2 1 23 127 149 127 149 0.99

5 16 9.8e-06 0.00062 21.2 3.9 1 23 155 177 155 177 0.99

6 16 0.00061 0.039 15.5 2.4 1 23 183 205 183 205 0.98

7 16 0.0005 0.032 15.8 0.9 1 23 211 233 211 233 0.98

8 16 0.0054 0.35 12.5 2.1 3 23 241 261 239 261 0.98

9 16 0.0003 0.019 16.5 0.8 1 23 267 289 267 289 0.97

10 16 3.2e-05 0.002 19.5 2.9 1 23 295 317 295 317 0.99

11 16 6.6e-05 0.0042 18.6 1.5 1 23 323 345 323 345 0.99

12 16 0.00032 0.02 16.4 1.5 1 23 351 373 351 373 0.98

13 16 0.0027 0.17 13.5 5.9 1 23 379 401 379 401 0.98

14 16 0.0022 0.14 13.8 0.6 1 22 407 428 407 428 0.97

15 16 0.032 2 10.1 5.7 1 23 435 458 435 458 0.95

16 16 3.2e-05 0.0021 19.5 3.0 1 23 464 486 464 486 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.1e-05	0.002	19.6	2.6	1	23	43	65	43	65	0.99
2	16	4.5e-06	0.00029	22.2	2.6	1	23	71	93	71	93	0.98
3	16	0.004	0.26	12.9	1.3	2	23	100	121	99	121	0.92
4	16	9.6e-06	0.00061	21.2	3.2	1	23	127	149	127	149	0.99
5	16	9.8e-06	0.00062	21.2	3.9	1	23	155	177	155	177	0.99
6	16	0.00061	0.039	15.5	2.4	1	23	183	205	183	205	0.98
7	16	0.0005	0.032	15.8	0.9	1	23	211	233	211	233	0.98
8	16	0.0054	0.35	12.5	2.1	3	23	241	261	239	261	0.98
9	16	0.0003	0.019	16.5	0.8	1	23	267	289	267	289	0.97
10	16	3.2e-05	0.002	19.5	2.9	1	23	295	317	295	317	0.99
11	16	6.6e-05	0.0042	18.6	1.5	1	23	323	345	323	345	0.99
12	16	0.00032	0.02	16.4	1.5	1	23	351	373	351	373	0.98
13	16	0.0027	0.17	13.5	5.9	1	23	379	401	379	401	0.98
14	16	0.0022	0.14	13.8	0.6	1	22	407	428	407	428	0.97
15	16	0.032	2	10.1	5.7	1	23	435	458	435	458	0.95
16	16	3.2e-05	0.0021	19.5	3.0	1	23	464	486	464	486	0.97

Sequence Information

Coding Sequence: ATGAAGACGGAAGGAATTGAATTGAAATCggaagatttgcatcattccGTTGATAGTAAAGAAGAGACTTTGATTCTAAAATCGCAACCTGTGGGAGAATATAAGCTGGAAACAAGCGCAAAACCCTTCAAGTGTGATCTTTGTGCGTATACGTGCGCACAaaagggtaatttaaaaaatcatttaagaactcatacacGCGAGAAACCGTATATGTGCGAAATTTGTGACTTTACATGTACACAACAAGGGAGTTTGAAAAACCACTTACGAACTCACagcggcgagaaaccgtttatcTGTATATTTTGTGACTACACCTGTGCTTACCAGGGAAGCCTAACaattcatttaagaactcataccggaGAGAAACCATATACGTGTGAAGTTTGCCGGTTAAGATTTTCCCAAAAAGGACACTTAAAGGatcatttaaaaactcacacAGGTCTAAAACCGTTTCAATGCGAAATTTGCGACTATAAATGCTCCCGGcagtttgatttaaaacttcatttacGAACCCacacgggggaaaaaccgtttaagTGCAGTATCTGTGACTACACTTGTGCACAGAAAGGAAACTTAAAGTTTCACTTGGCAACTCACGCAGGCCAAAAACCGTTTATGTGCGAATTTTGCGACTTTAAAGGTCGACGTAAAGGAGATTTGGTGagtcatttaagaactcatactgggGAGAAGCCGTTTGGTTGCAAACTTTGTGACTTCAAATGTGCACGTAAAGgagatttaaaaattcattcgaGAATACATTCAGGTCACAAGCCCTTTAAATGCGAAATGTGTGACTATAGATCTACGAGTAAAGCTACCTTAAATGTACATTTATTCGttcatacgggggaaaaaccgttcgagtgtgAAATTTGCGATTACAAGTGTGCACGACGGACAGacttaaaatatcatttaagaactcatacagGCGACAAACCGTATAAATGCGAATTTTGTGACTTTAGAAGTGCACAGAGAAGCAGTTTAAAAATTCATGTAAGAACTCATTCCGGCGTGAAACCCTATACATGCGaattttgtgactataaatcTGCAAGCAGAAGTAACTTAAAAATGCATGTGTACACTCATACAGGCCAAAAACCTCATACGTGTCATATTTGTGACTACAAGTGTGCTCGACAAATAGATTTGGATTATCATTTAAGAACCCATACAGGCGACCGACCATTTACGTGTGACTTGTGTCAGTCCAGATATGCACGTAAAGCTGATTTAAAGTATCACTTAAGAACTGGTATTGATGGAAAATCGTTTCggtgtaaaatttgtaactatGAATGTGCACGCAAGTGCAgcttaaaacttcattttttgAGTGTTCATACAGATGACAAACCGTTTGCATGcgaaatttgtgattataaatgtaccCGTAAGGGAGATCTGAAAAGTCACACTAAAACTCACACTGCGGAGGAACAATTTGCTTAA
Protein Sequence: MKTEGIELKSEDLHHSVDSKEETLILKSQPVGEYKLETSAKPFKCDLCAYTCAQKGNLKNHLRTHTREKPYMCEICDFTCTQQGSLKNHLRTHSGEKPFICIFCDYTCAYQGSLTIHLRTHTGEKPYTCEVCRLRFSQKGHLKDHLKTHTGLKPFQCEICDYKCSRQFDLKLHLRTHTGEKPFKCSICDYTCAQKGNLKFHLATHAGQKPFMCEFCDFKGRRKGDLVSHLRTHTGEKPFGCKLCDFKCARKGDLKIHSRIHSGHKPFKCEMCDYRSTSKATLNVHLFVHTGEKPFECEICDYKCARRTDLKYHLRTHTGDKPYKCEFCDFRSAQRSSLKIHVRTHSGVKPYTCEFCDYKSASRSNLKMHVYTHTGQKPHTCHICDYKCARQIDLDYHLRTHTGDRPFTCDLCQSRYARKADLKYHLRTGIDGKSFRCKICNYECARKCSLKLHFLSVHTDDKPFACEICDYKCTRKGDLKSHTKTHTAEEQFA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00271530;
90% Identity: iTF_00271530;
80% Identity: -