Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424437.1:4901008-4913855[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00011 0.0071 17.8 0.1 1 23 91 113 91 113 0.98

2 17 0.00038 0.024 16.1 0.6 1 23 119 141 119 141 0.96

3 17 1.1e-05 0.00073 20.9 1.3 1 23 147 169 147 169 0.98

4 17 5.7e-05 0.0036 18.8 2.2 1 23 175 197 175 197 0.98

5 17 0.00012 0.0074 17.8 1.6 1 23 203 225 203 225 0.97

6 17 4e-05 0.0026 19.2 2.3 1 23 231 253 231 253 0.98

7 17 5.8e-05 0.0037 18.7 0.7 1 23 259 281 259 281 0.98

8 17 5e-07 3.2e-05 25.2 1.8 1 23 287 309 287 309 0.99

9 17 0.00012 0.0075 17.8 3.7 1 23 315 337 315 337 0.98

10 17 1.1 73 5.2 1.3 1 14 343 356 343 357 0.88

11 17 0.00065 0.042 15.4 3.4 1 23 403 425 403 425 0.99

12 17 1.2e-05 0.00079 20.8 2.4 1 23 431 453 431 453 0.98

13 17 7.2e-05 0.0046 18.4 6.3 1 23 459 481 459 481 0.99

14 17 0.11 6.9 8.4 7.3 1 23 487 509 487 509 0.98

15 17 0.00093 0.059 14.9 1.4 3 23 517 537 515 537 0.98

16 17 0.019 1.2 10.8 5.2 1 23 543 566 543 566 0.95

17 17 0.00012 0.0077 17.7 0.5 1 23 572 594 572 594 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00011	0.0071	17.8	0.1	1	23	91	113	91	113	0.98
2	17	0.00038	0.024	16.1	0.6	1	23	119	141	119	141	0.96
3	17	1.1e-05	0.00073	20.9	1.3	1	23	147	169	147	169	0.98
4	17	5.7e-05	0.0036	18.8	2.2	1	23	175	197	175	197	0.98
5	17	0.00012	0.0074	17.8	1.6	1	23	203	225	203	225	0.97
6	17	4e-05	0.0026	19.2	2.3	1	23	231	253	231	253	0.98
7	17	5.8e-05	0.0037	18.7	0.7	1	23	259	281	259	281	0.98
8	17	5e-07	3.2e-05	25.2	1.8	1	23	287	309	287	309	0.99
9	17	0.00012	0.0075	17.8	3.7	1	23	315	337	315	337	0.98
10	17	1.1	73	5.2	1.3	1	14	343	356	343	357	0.88
11	17	0.00065	0.042	15.4	3.4	1	23	403	425	403	425	0.99
12	17	1.2e-05	0.00079	20.8	2.4	1	23	431	453	431	453	0.98
13	17	7.2e-05	0.0046	18.4	6.3	1	23	459	481	459	481	0.99
14	17	0.11	6.9	8.4	7.3	1	23	487	509	487	509	0.98
15	17	0.00093	0.059	14.9	1.4	3	23	517	537	515	537	0.98
16	17	0.019	1.2	10.8	5.2	1	23	543	566	543	566	0.95
17	17	0.00012	0.0077	17.7	0.5	1	23	572	594	572	594	0.97

Sequence Information

Coding Sequence: ATGGAGAACATAGAAGTCAAATTGAAGGATTTGCAACAGTCCGTTGATATTAAGGAAGGTCGTCCGATGTTACAACATCAGCAGGATAGCAATCTTGACGAAAAGGATACTTCATGTCAATCAGATGGCTTTCAAATTAagatagaagaagaagaaatggaaTTCCAGTTGGATGATTTGCACCATTCCATAGACATTAAAGAAGAGATTTCCATTGTGGAATCCCAACCACCGGTTATTCTTTTGAAAACTCTCGCTGGCGAGAAACTGTATACATGCGAAGTTTGCGGCTACATATCGGCAgttaaaggaaatttaaaaagacATTCAAGAATCCATACTGGAGAGAAGCCTTTTTTATGTGGAATTTGTGATTATAGATGTGCACTGAAGGAGGCTTTAATAAGTCACATGAGGACTCATAACAACGACAAATCGTTTACGTGTAAAATTTGCGGCATCAAGTGTAGTCGTAGAGGTAACTTGGCAATGCATTTATTAACTCACACGGACCAGAAGCCTTTCAGTTGCGAACATTGCGACTATAGAGGTGCACGAAAGGATTATTTGAAAATCCACTTAAGAACTCATACGGGAAACAAGCCGTTTACATGTAAAATATGCGACTATAAATGTGCACGTCGGGATGACTTACGGGTTCACGTAGATAGTCATTCTGGCGAGAAGCAGTTTTCATGTGATATTTGTGAATATAAATTTGTACACAAAAAAAGTATAATCAGGCATATGAGGATTCATACTGGGGAAAAACCGTATGcgtgtaaaatttgtgattacaAATGTACACAGCCAGGAATGCTGAATCTTCATGTGAGgattcatactggcgaaaaaccatttacctGCGAGATTTGTGGTCACAAATTTGCGCGCAGCGGAAATCTTACTAGTCATTTGAAGACTCATACAGGGGAAAAACCTTTTACATGCGATATGTGTAATTATAACTGCACGCGTAAACGGGATTTAAAACGGCATTTAATTgttcatactggcgagaagccgtttatatgtaaaatttgcgGATACAAATGTGCACataagGAAGCTCCGTGCTATTCCAATAATTTTCCTCAAATTAAAATAGAAGAAGTAGAAATCAAGTTGGAGGATTTGCATCATTCGATagacattaaagaagaattcTCCATTCGAGAATGCAAAGTAGAATTAAGCGGGAAACCGTTCAAGTGTGACATTTGTGATTTTCGAAGTGCATACAAGGGCTGTTTAAAAACCCACTTAAGAACTCATTCTGACGATAAGCCTTTCacgtgtgaaatttgtgactataGATGTTCACGTAAAGGAGATTTGACAATTCATTTGAGATATCAtgcgggggaaaaaccgtacacttgtaaaatttgtaattataaatgcGTACGTGAAGGCCATTTGAAGAGGCATTTGAaaactcataccggggaaaaaccgttttctTGTGatttttgtgattataaatgttcggATACCTGTCGGTTGAAACAGCACGTGAGGactcatacgggggaaaaaccttTTGGATGTAGTATTTGCGATCATAAATCTTCAACGAAACAGCAGTTGGTGGTGCACATGAAAATTCATACAGGGGAAAAATTGTTTGAGTGTAAATTTTGCGATCACAAATATTCGACCAAACATCTGCTGGTGGTTCACAATATGAGAAATCACACCGGAGAGAAACCGTTCGCCTGCGGAATCTGTAACTATAAAAGTGCAGTCAAATATGATTTGAAACGGCATATAAAGACGCATTCCACCAAGTAA
Protein Sequence: MENIEVKLKDLQQSVDIKEGRPMLQHQQDSNLDEKDTSCQSDGFQIKIEEEEMEFQLDDLHHSIDIKEEISIVESQPPVILLKTLAGEKLYTCEVCGYISAVKGNLKRHSRIHTGEKPFLCGICDYRCALKEALISHMRTHNNDKSFTCKICGIKCSRRGNLAMHLLTHTDQKPFSCEHCDYRGARKDYLKIHLRTHTGNKPFTCKICDYKCARRDDLRVHVDSHSGEKQFSCDICEYKFVHKKSIIRHMRIHTGEKPYACKICDYKCTQPGMLNLHVRIHTGEKPFTCEICGHKFARSGNLTSHLKTHTGEKPFTCDMCNYNCTRKRDLKRHLIVHTGEKPFICKICGYKCAHKEAPCYSNNFPQIKIEEVEIKLEDLHHSIDIKEEFSIRECKVELSGKPFKCDICDFRSAYKGCLKTHLRTHSDDKPFTCEICDYRCSRKGDLTIHLRYHAGEKPYTCKICNYKCVREGHLKRHLKTHTGEKPFSCDFCDYKCSDTCRLKQHVRTHTGEKPFGCSICDHKSSTKQQLVVHMKIHTGEKLFECKFCDHKYSTKHLLVVHNMRNHTGEKPFACGICNYKSAVKYDLKRHIKTHSTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00271557;
90% Identity: -
80% Identity: -