Cfla015634.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Cantharis flavilabris
Gene Symbol
-
Assembly
GCA_949152465.1
Location
OX424437.1:3887950-3899215[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.49 31 6.4 6.1 1 23 133 155 133 155 0.99
2 24 0.0018 0.12 14.0 1.4 2 23 162 183 161 183 0.97
3 24 0.068 4.3 9.1 1.6 1 23 189 212 189 212 0.96
4 24 0.037 2.3 9.9 2.5 1 23 219 241 219 241 0.97
5 24 0.0014 0.09 14.4 1.1 1 23 247 269 247 269 0.98
6 24 0.048 3.1 9.5 1.5 1 23 275 298 275 298 0.96
7 24 1.3e-05 0.00085 20.7 2.8 1 23 304 326 304 326 0.99
8 24 0.29 19 7.1 3.7 1 23 332 354 332 354 0.98
9 24 0.00014 0.0086 17.6 0.2 1 23 360 382 360 382 0.98
10 24 0.0021 0.13 13.8 0.3 5 23 392 410 389 410 0.95
11 24 6.3e-06 0.0004 21.8 1.2 1 23 416 438 416 438 0.98
12 24 0.0018 0.11 14.1 7.5 1 23 444 466 444 466 0.98
13 24 0.00013 0.0081 17.6 4.0 1 23 541 563 541 563 0.99
14 24 0.00062 0.039 15.5 3.6 1 23 569 591 569 591 0.99
15 24 0.037 2.4 9.9 1.5 1 23 597 620 597 620 0.95
16 24 0.00089 0.057 15.0 2.8 1 23 626 648 626 648 0.98
17 24 0.32 21 6.9 2.0 1 23 654 676 654 676 0.98
18 24 0.00031 0.02 16.5 3.9 1 23 682 704 682 704 0.99
19 24 0.003 0.19 13.3 0.3 1 23 710 732 710 732 0.94
20 24 1.3e-06 8e-05 24.0 1.9 1 23 738 760 738 760 0.99
21 24 0.0058 0.37 12.4 1.5 1 23 766 788 766 788 0.99
22 24 0.11 7.1 8.4 5.0 1 23 794 816 794 816 0.99
23 24 0.0012 0.08 14.5 0.3 1 23 822 844 822 844 0.94
24 24 5.1e-05 0.0033 18.9 3.1 1 23 850 872 850 872 0.99

Sequence Information

Coding Sequence
ATGATTGAACCAAATCACGACATGGATATCAAGCTGGAAGACGTCCATCTTTCCATCAACACCACAGCGACTCCTTCAAGTAATTCAGAGGTAAAAACTGGTagcaaacatattaaaattgaagacgTGGAGGATGTGGATATCGAACTGGAATCCTTGCATCATTCCTTTGACATTAAAGAGGAGACTTCAGGAAGAGAATCCCAATTGGATCAAAATTGCCAATTCAATTTGCATCCTGGTAAGGAACCTCCATGCCATTCAATTAGCTGCTCCCAAATTAAGACGGAAATAGAAGAAGTAGATTTCAAGttggaagatttgcatcattcgGTTGATATTAAAGAGGAAATTTCAATTCTAGAATCTCAACTGCCCAAAGCAGACAAGAAGCCGTTTAAATGTGAAAGTTGCGATTACAAATGTGAGCATAAAGGAATCTTCGAAAGACATCTACGGAAGCACACCGAGAAGAAACCGTTGACATGCGAAGTATGCGGAtacaaatgtaaacaaaaatcaattttaaaagtgCATGTAAGAGTTCATACAGGAGATAGGCCGTTTTCGTGTGGACTCTGCGACTACAAAGGTTCACGGAAGAACAGATTAAAGCAGCATTACGCCAGAACTCATAGTAGCGAAGAGGAACAGTTTGCGTGTGAAGTTTGTGAGTATAAATGTGCGCATAAAGGAATCTTAGAAAGACATTTAAGGAAGCATGCAGACAAAAAACTGTTTACGTGTGATGTTTGCGGTTACAAATGCAAGCAAAAATCCATCTTGGAGGTTCATGCAAGAATCCATACCGGAGACAAGCCGTTTACGTGTAAAATTTGTGACTACAAGGGTGCACGGAAGGACCGAGTCAAGCAGCATTACTTAAGAACTCATGCTACCGAGAAACAGTTTACGTGCGAAGTCTGCGGCTACCAATGTACAACAAATGCATATCTAAAAAGGCACGTAAGGACTCATACTGGTGAGAAGCCTTTCTCATGTGGATTTTGCAACTACAAATGTGCACAGCAAGCCAGGTTGCGTTTTCATATAAGAACTCACACCGGCGATAAGCCGTTTATATGCGCAGTCTGTGACCTAAAGTTTGCAGAGAAAGAAAAACTCAAAGTTCACTTAAGAACTCAcactggcgaaaaaccgtttgggTGTATAATCTGTGATTTTAGGAGTGCGCGCCAGGACGACTTAAATAAACATATAAGAACTCATACAGGCGAGAAACTTTTTCCCTGTGAAATCTGCGACTATAAGAGTTCGCGCAAGGAAAACTTAAAAActcatttaaaaactcatacAGGCCTCAAACCCTTCATGTGCGAGATTTGTGAATACAAATGTGCGCACAAGCATagcttaaaaaatcatttaagaactcatacagGTGAGAAACCGTTTGGTTGCGATATTTGTGATTACAAGTGTACACAGAAGGAAACTCCAAGCCATTCGAATATCTACCCCCAAATCAAGATAGAAATAGAGGAAGTAGTGGAAGTTAAATTGGAAGATCTGCATCATTCCGTTGACATTAAAGATGAGATCGTAATTCAGGAGTATCAACAGGATTTGGAATGCAAACCAGAAACAAGCAGTAAACCGTTCAAGTGTGAAttatgcgattataaatgtgcacacAGCGGAGCCCTACAGAGgcatttaaaaactcataccGGAGACAAACAGTTTACGTGTGGAATTTGTGAATACAAATGTTCACGAAAGGATAGATTGAAGATCCATTTGAAAACTCACACCGACAGCAAGGCGTTCAAGTGTGAGATTTGCGATTTTGCATGCGCTCGGGTGGAAAAATTAAACCTTCATTTCTTACGAACGCACTCCAGTAAGAAACAGTTTATGTGCGACGTTTGCGGCTACAAATGTAAAAcgaattcaattttgaaaaggcatttaaaaattcataccgTAGAAAAACCGTTCAGGTGcgaattttgtgaatttaaatgTTCGCAAGAAGTGAGGTTAAGTATTCACGTGAGGGCTcacactggcgagaaaccatttaccTGCGAATCTTGCGACTACAAATGTGCATCGAAGGGAGATTTTAAACGGCATTTAAGAACTCACACTGGGGAGAAGCCGTATGCGTGTATAATATGCGATTTTACGAGTGCGCGtcaaaatgatttgaacaaACATGTAAGAACTCATACAGGCGATAAACCGTTCACCTGTGAGCTGTGTGGCTACAAATACACAACAAACGCATATTTGAAAAGGCATCTCCGGACTCACTCCGGCGAGAAACCCTATCAGTGTGAATTTTGCGATTATAAGTGTGCAGAAcagggcagattaaatattcaTGTAAGAAGCCACACTGGCGATAAACCATTTAAATGTGAACATTGTGACTATAGAGGTGCATGTAAAGGTGACTTGAAAAGACATTcgagaactcataccggcgaaaaaccgtatgCCTGCataatttgtgattttaaaagtGCACGTCGGGATGATTTGAACAAACACATTAGAACCCATACAGGCGAGAAGCCGTTTACTTGCGATACTTGTGACTTTAGAACTTCACGTAAGGAAAACCTAAAGTatcatttaagaactcacacTGGCGAGAAGTAG
Protein Sequence
MIEPNHDMDIKLEDVHLSINTTATPSSNSEVKTGSKHIKIEDVEDVDIELESLHHSFDIKEETSGRESQLDQNCQFNLHPGKEPPCHSISCSQIKTEIEEVDFKLEDLHHSVDIKEEISILESQLPKADKKPFKCESCDYKCEHKGIFERHLRKHTEKKPLTCEVCGYKCKQKSILKVHVRVHTGDRPFSCGLCDYKGSRKNRLKQHYARTHSSEEEQFACEVCEYKCAHKGILERHLRKHADKKLFTCDVCGYKCKQKSILEVHARIHTGDKPFTCKICDYKGARKDRVKQHYLRTHATEKQFTCEVCGYQCTTNAYLKRHVRTHTGEKPFSCGFCNYKCAQQARLRFHIRTHTGDKPFICAVCDLKFAEKEKLKVHLRTHTGEKPFGCIICDFRSARQDDLNKHIRTHTGEKLFPCEICDYKSSRKENLKTHLKTHTGLKPFMCEICEYKCAHKHSLKNHLRTHTGEKPFGCDICDYKCTQKETPSHSNIYPQIKIEIEEVVEVKLEDLHHSVDIKDEIVIQEYQQDLECKPETSSKPFKCELCDYKCAHSGALQRHLKTHTGDKQFTCGICEYKCSRKDRLKIHLKTHTDSKAFKCEICDFACARVEKLNLHFLRTHSSKKQFMCDVCGYKCKTNSILKRHLKIHTVEKPFRCEFCEFKCSQEVRLSIHVRAHTGEKPFTCESCDYKCASKGDFKRHLRTHTGEKPYACIICDFTSARQNDLNKHVRTHTGDKPFTCELCGYKYTTNAYLKRHLRTHSGEKPYQCEFCDYKCAEQGRLNIHVRSHTGDKPFKCEHCDYRGACKGDLKRHSRTHTGEKPYACIICDFKSARRDDLNKHIRTHTGEKPFTCDTCDFRTSRKENLKYHLRTHTGEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00271509;
90% Identity
-
80% Identity
-