Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424437.1:4217717-4219255[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.9e-05 0.0051 18.3 0.1 1 23 12 34 12 34 0.98

2 18 0.00065 0.042 15.4 0.3 1 23 40 62 40 62 0.96

3 18 3.2e-05 0.0021 19.5 0.4 1 23 68 90 68 90 0.98

4 18 5e-08 3.2e-06 28.4 0.7 1 23 96 118 96 118 0.98

5 18 0.0018 0.12 14.0 3.7 1 23 124 146 124 146 0.98

6 18 7.7e-05 0.0049 18.3 3.2 1 23 152 174 152 174 0.98

7 18 0.016 1 11.1 1.3 1 23 180 202 180 202 0.98

8 18 7.3e-05 0.0046 18.4 0.5 1 23 208 230 208 230 0.97

9 18 0.00061 0.039 15.5 1.3 1 23 236 258 236 258 0.97

10 18 0.00057 0.036 15.6 0.4 1 23 264 286 264 286 0.98

11 18 0.00029 0.019 16.5 2.6 3 23 294 314 292 314 0.98

12 18 3.6e-05 0.0023 19.4 1.5 1 23 320 342 320 342 0.97

13 18 2e-05 0.0013 20.2 2.9 1 23 348 370 348 370 0.97

14 18 0.00034 0.021 16.3 0.7 1 23 376 398 376 398 0.98

15 18 0.00023 0.015 16.9 1.6 1 23 404 426 404 426 0.98

16 18 1.1e-05 0.00067 21.1 2.4 1 23 432 454 432 454 0.99

17 18 0.00051 0.033 15.8 2.8 1 23 460 482 460 482 0.98

18 18 3.8e-05 0.0024 19.3 2.1 1 23 488 510 488 510 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.9e-05	0.0051	18.3	0.1	1	23	12	34	12	34	0.98
2	18	0.00065	0.042	15.4	0.3	1	23	40	62	40	62	0.96
3	18	3.2e-05	0.0021	19.5	0.4	1	23	68	90	68	90	0.98
4	18	5e-08	3.2e-06	28.4	0.7	1	23	96	118	96	118	0.98
5	18	0.0018	0.12	14.0	3.7	1	23	124	146	124	146	0.98
6	18	7.7e-05	0.0049	18.3	3.2	1	23	152	174	152	174	0.98
7	18	0.016	1	11.1	1.3	1	23	180	202	180	202	0.98
8	18	7.3e-05	0.0046	18.4	0.5	1	23	208	230	208	230	0.97
9	18	0.00061	0.039	15.5	1.3	1	23	236	258	236	258	0.97
10	18	0.00057	0.036	15.6	0.4	1	23	264	286	264	286	0.98
11	18	0.00029	0.019	16.5	2.6	3	23	294	314	292	314	0.98
12	18	3.6e-05	0.0023	19.4	1.5	1	23	320	342	320	342	0.97
13	18	2e-05	0.0013	20.2	2.9	1	23	348	370	348	370	0.97
14	18	0.00034	0.021	16.3	0.7	1	23	376	398	376	398	0.98
15	18	0.00023	0.015	16.9	1.6	1	23	404	426	404	426	0.98
16	18	1.1e-05	0.00067	21.1	2.4	1	23	432	454	432	454	0.99
17	18	0.00051	0.033	15.8	2.8	1	23	460	482	460	482	0.98
18	18	3.8e-05	0.0024	19.3	2.1	1	23	488	510	488	510	0.98

Sequence Information

Coding Sequence: ATGCATTTGAGAACTCATACAGGCGAGAAGCCTTACatgtgtgaaatttgtgattttgcGTTTCCGGCTACCGGATCTCTAAACAGgcatttaaaaactcatacTGGCCGGAAGCCGTTTCTGTGTGACATTTGTGACTTCCAAAGTGGCAGTCAAGCCGACTTGAAACGGCACGTAAGAACTCACACTGGCGATAAGCCTTTCGTTTGCGAAATTTGTGACTTTAAATCTGCCGAAAGAGGAAATTTACGGAGACATTTAAGGACTCACACCGGCGACAAGCCGTTTCCATGTGAAATTTGTGGATTTAAGTTTTCCGATCAAGGAAATTTGAAGAGGCATTTAAagactcataccggcgagaaaccatttaagtgtGAAAATTGCGATTTCAGATGTGCAGTTAAACAGGATTTAAAGAGGCACTTTAGAAtccataccggggaaaaaccgttttcgTGCGACACATGCGACTTTAAATGTTCCGATAGAGGAAACTTAAAAAAGCATTTAATAACTCACTCCGGCACGAAGCCATTTATGTGTGAAGTCTGCGTTTTTGACACAGCACACAAGGAAAGTTTGAAAAGTCATGTGAAAACCCACacaggcgagaaaccatttgctTGCGATATCTGTGCCTTTAAGTTTGCCGTTAAGCAGGATCTAAAGAGACATTTAAGAACTCActccggggaaaaaccgtatgcATGTGatatttgtgattttaaatgtgCGCAAAAGGGATATTTAAAAACGCATTTGACaattcataccggggaaaaaccgttttcaTGTGAATTTTGCGCATTTACGACTGCGCAGCGGGAAAACTTGAAAATTCATATCAGaattcataccggggaaaaaccgttcggTTGTGAattttgcgaatataaatgtgcGAGGAAGGAAGACTTAAATAGGCACTTGAGAACTCATACTGGTAGTAAACCGTTTGCATGTaaaatttgcgattttaaatgttcgttggcgggaaatttgaaaaaccatATGAGAATTCATACTAGTGACAAACCGCATGCGTGTAAAATATGCGACTCGAAATATAAGGATAAAGCAAGTTTAAAGAGACATTTAAGAACccatacgggggaaaaaccgtttccTTGCGATATATGTAGTTTTAAATCTTCTgatgaaagaaatttaaaaacgcattTGATGACTCATacaggcgagaaaccgttttcatgtgaattttgtgaatttaCCACTGCGCATAGAGGAAGCTTAACAGCTCATAtaagaactcatactggcgaaaaaccgttcgagtgtgAAACTTGCGAGTATAAATGTGCGAGAAAGGAAGATTTAAACAGGCATATAAGGACTCATACCGGTAGCAAACCGTTCACATGTGAATTTTGCAGCTTTACCTGCGCAGAAAGGGGAAATTTACGACGTCATTTAAGAATTCACACTGGAGACAAGCCGTATTCGTGTGAATTTTGTGGCTCAAAATTTGGAGATAAGAGAAATTTTAAACGGCATTTAAGAATTCATGCTGCCTAG
Protein Sequence: MHLRTHTGEKPYMCEICDFAFPATGSLNRHLKTHTGRKPFLCDICDFQSGSQADLKRHVRTHTGDKPFVCEICDFKSAERGNLRRHLRTHTGDKPFPCEICGFKFSDQGNLKRHLKTHTGEKPFKCENCDFRCAVKQDLKRHFRIHTGEKPFSCDTCDFKCSDRGNLKKHLITHSGTKPFMCEVCVFDTAHKESLKSHVKTHTGEKPFACDICAFKFAVKQDLKRHLRTHSGEKPYACDICDFKCAQKGYLKTHLTIHTGEKPFSCEFCAFTTAQRENLKIHIRIHTGEKPFGCEFCEYKCARKEDLNRHLRTHTGSKPFACKICDFKCSLAGNLKNHMRIHTSDKPHACKICDSKYKDKASLKRHLRTHTGEKPFPCDICSFKSSDERNLKTHLMTHTGEKPFSCEFCEFTTAHRGSLTAHIRTHTGEKPFECETCEYKCARKEDLNRHIRTHTGSKPFTCEFCSFTCAERGNLRRHLRIHTGDKPYSCEFCGSKFGDKRNFKRHLRIHAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00269400;
90% Identity: iTF_00269400;
80% Identity: iTF_00269400;