Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424436.1:55948107-55949992[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 4e-05 0.0026 19.2 0.3 1 23 91 113 91 113 0.98

2 16 1e-05 0.00066 21.1 0.3 1 23 119 142 119 142 0.97

3 16 0.0017 0.11 14.1 0.7 1 23 153 176 153 176 0.94

4 16 0.00052 0.033 15.7 0.1 2 23 196 217 195 217 0.96

5 16 6 3.8e+02 2.9 8.1 1 23 223 245 223 245 0.82

6 16 6.8e-05 0.0044 18.5 0.4 3 23 255 275 253 275 0.97

7 16 4e-06 0.00025 22.4 5.0 1 23 281 303 281 303 0.98

8 16 0.00047 0.03 15.9 2.3 1 23 309 331 309 331 0.98

9 16 7.6e-07 4.9e-05 24.6 0.2 1 23 337 359 337 359 0.98

10 16 0.0005 0.032 15.8 1.5 1 23 365 387 365 387 0.98

11 16 4.6e-07 2.9e-05 25.3 1.9 3 23 395 415 393 415 0.96

12 16 1.1e-06 7.2e-05 24.1 0.1 2 23 421 442 420 442 0.97

13 16 3.7e-05 0.0024 19.3 3.1 1 23 448 470 448 470 0.98

14 16 0.00039 0.025 16.1 0.4 1 23 476 498 476 498 0.97

15 16 3.1e-08 2e-06 29.0 0.9 1 23 504 526 504 526 0.99

16 16 0.0019 0.12 13.9 0.2 1 20 532 551 532 553 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	4e-05	0.0026	19.2	0.3	1	23	91	113	91	113	0.98
2	16	1e-05	0.00066	21.1	0.3	1	23	119	142	119	142	0.97
3	16	0.0017	0.11	14.1	0.7	1	23	153	176	153	176	0.94
4	16	0.00052	0.033	15.7	0.1	2	23	196	217	195	217	0.96
5	16	6	3.8e+02	2.9	8.1	1	23	223	245	223	245	0.82
6	16	6.8e-05	0.0044	18.5	0.4	3	23	255	275	253	275	0.97
7	16	4e-06	0.00025	22.4	5.0	1	23	281	303	281	303	0.98
8	16	0.00047	0.03	15.9	2.3	1	23	309	331	309	331	0.98
9	16	7.6e-07	4.9e-05	24.6	0.2	1	23	337	359	337	359	0.98
10	16	0.0005	0.032	15.8	1.5	1	23	365	387	365	387	0.98
11	16	4.6e-07	2.9e-05	25.3	1.9	3	23	395	415	393	415	0.96
12	16	1.1e-06	7.2e-05	24.1	0.1	2	23	421	442	420	442	0.97
13	16	3.7e-05	0.0024	19.3	3.1	1	23	448	470	448	470	0.98
14	16	0.00039	0.025	16.1	0.4	1	23	476	498	476	498	0.97
15	16	3.1e-08	2e-06	29.0	0.9	1	23	504	526	504	526	0.99
16	16	0.0019	0.12	13.9	0.2	1	20	532	551	532	553	0.93

Sequence Information

Coding Sequence: ATGATGTCGTTTACTTGCTTACAGGTGACATTTGAAGACGATTTGCCCAACACCGTGTGCCTTACGTGTTCAAATAGAATCGAAAGTGCTTACTTGCTCAAATTACAATGCCGAGAGTCGGATTCCACATTGCGTCGATATTTAAATTCGGAATTTCGATCTGAAAATTGTAATTCTGATCAAGTAAAGAATAACCTAAGCCACGGTTTGCTGTTGGAATTAACGAACGAAGAATCCGAAAATTTTATCGATACAAATAAAAGTAAGACGTTTGAATGCGACGAATGTAAACTTGTGTTTGATAAACAAAAACTACTACGAATACATATCCGTGGTCACAAGAAAAAGAAACGATATGCCTGCAAAATTTGTAACAAGAATTTTATAGAATCTGTTCAACTAAATCAACACATGAATGTAATGCACAACAGAGAAGAATTCGAAAATAACACGATACATATTTGTACAGTGTGCGACGACAAATTTAGTACTAACGCAAGCTTAATTGAACACATGGTACGTAAGCATACCCAGAAAGAGACCAAGGAATTAAGTGAAGAAAACGCAATGCACAACGAAAGATTGATGTGTAATGTTTGTAACAAGACGTATTTAAAGGCCAGTAATTTGGCCGCCCACATGGGAACTCATACGGGCGAAAAACCTTTCGAATGCCATATCTGTAGGAAAAGGTTCACTCAAGGACGCGCTCACGCTTGCCACATGCGAACACATTCTAAGGAAATTGAAAAACCTTACGGctgcaaaatttgcaacaaagaATTTGCACGCGAAAGTCAATTAGCGGTCCATTCGAAAAAACATTTAGCTACGAAATCATTTGTTTGCAGCATCTGTAATAAGAGTTGTTGTAATTCGGGTAACCTCAAGTCGCATATGCGTTTGCACACCGGAGATAAGCCATATTCCTGCAATATTTGTGGTCGAACGTTTGCTCAAAGTAATGCACACTCTTATCATATGAAAACACATTCAGGTGAGAGACCTTTCGAATGCGACGTATGTCCGAAAGCATTTACTACTAACGGCCAATTGATAAATCATCGTCGTTTACATAcaggcgaaaaaccgttcgtgTGCGCCGTTTGCAATAAACGATTTACGCAAAAAGTTGCGCACACAATTCACATGATGACCCACACTGGCAATAAGCCACACTTGTGCAGTATATGTGGcaaaaaatattcacaaaacAGTCAATTGGTTGAACACATGCGTACTCACACGGGGGAAACTTTACAGTGTAATGTGTGTGGGAAGGGTTACTCTACGGCTGGAAATTTAGGTGCCCACATGAAGACGCATACAGGTATAAAGACTCACGTGTGTCAAATTTGTCACAAAGGTTTTTATGTTGCTAACAAATTGGCAAAACATATGAGGACCCACACCGGAGAGCGGCCTTACGCTTGTACAATGTGTCCAAAACGTTTTACTAGTTCCGAAGTAATGAAAGTACACAATAGAATTCACACAGGAGAAAGACCATACCGTTGCAGTATTTGCGATAAAGGTTTCACAAATAATTCCCAACTCACCGTTCATCTTCGTTCTCACACTGGTCAGAGACCATACATATGTACAGTTTGTTTGCAAAGCTTTACCACTTCTGCAAGTCTAAACTCTCATTCCAGTACTTGTACTAGGTTGATTGAAACCactatttattctaattttactCCAAATTAA
Protein Sequence: MMSFTCLQVTFEDDLPNTVCLTCSNRIESAYLLKLQCRESDSTLRRYLNSEFRSENCNSDQVKNNLSHGLLLELTNEESENFIDTNKSKTFECDECKLVFDKQKLLRIHIRGHKKKKRYACKICNKNFIESVQLNQHMNVMHNREEFENNTIHICTVCDDKFSTNASLIEHMVRKHTQKETKELSEENAMHNERLMCNVCNKTYLKASNLAAHMGTHTGEKPFECHICRKRFTQGRAHACHMRTHSKEIEKPYGCKICNKEFARESQLAVHSKKHLATKSFVCSICNKSCCNSGNLKSHMRLHTGDKPYSCNICGRTFAQSNAHSYHMKTHSGERPFECDVCPKAFTTNGQLINHRRLHTGEKPFVCAVCNKRFTQKVAHTIHMMTHTGNKPHLCSICGKKYSQNSQLVEHMRTHTGETLQCNVCGKGYSTAGNLGAHMKTHTGIKTHVCQICHKGFYVANKLAKHMRTHTGERPYACTMCPKRFTSSEVMKVHNRIHTGERPYRCSICDKGFTNNSQLTVHLRSHTGQRPYICTVCLQSFTTSASLNSHSSTCTRLIETTIYSNFTPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00272978; iTF_00271519; iTF_01294079; iTF_01292044;
90% Identity: iTF_00272978; iTF_00271519; iTF_01294079; iTF_01292044;
80% Identity: -