Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424435.1:22929831-22933162[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.5e-05 0.00096 20.6 1.1 1 23 147 169 147 169 0.98

2 15 2.4e-07 1.6e-05 26.2 0.6 1 23 175 197 175 197 0.98

3 15 5.2e-05 0.0033 18.9 3.1 1 23 203 225 203 225 0.98

4 15 3.5e-06 0.00023 22.6 4.9 2 23 232 253 231 253 0.97

5 15 5.1e-07 3.3e-05 25.2 1.6 1 23 259 281 259 281 0.99

6 15 3.9e-06 0.00025 22.4 2.6 1 23 287 309 287 309 0.98

7 15 4.3e-06 0.00027 22.3 0.8 1 23 315 337 315 337 0.98

8 15 4.1e-07 2.6e-05 25.5 1.2 1 23 343 365 343 365 0.95

9 15 2e-05 0.0013 20.2 1.5 1 23 371 393 371 393 0.96

10 15 3.6e-07 2.3e-05 25.7 1.5 1 23 399 421 399 421 0.98

11 15 3e-06 0.00019 22.8 2.9 1 23 430 452 430 452 0.97

12 15 4.5e-06 0.00029 22.2 3.4 1 23 458 480 458 480 0.98

13 15 2.7e-06 0.00017 22.9 0.3 1 23 486 508 486 508 0.99

14 15 9.2e-06 0.00059 21.2 2.2 1 23 514 536 514 536 0.99

15 15 0.00011 0.0069 17.9 0.3 1 22 542 563 542 566 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.5e-05	0.00096	20.6	1.1	1	23	147	169	147	169	0.98
2	15	2.4e-07	1.6e-05	26.2	0.6	1	23	175	197	175	197	0.98
3	15	5.2e-05	0.0033	18.9	3.1	1	23	203	225	203	225	0.98
4	15	3.5e-06	0.00023	22.6	4.9	2	23	232	253	231	253	0.97
5	15	5.1e-07	3.3e-05	25.2	1.6	1	23	259	281	259	281	0.99
6	15	3.9e-06	0.00025	22.4	2.6	1	23	287	309	287	309	0.98
7	15	4.3e-06	0.00027	22.3	0.8	1	23	315	337	315	337	0.98
8	15	4.1e-07	2.6e-05	25.5	1.2	1	23	343	365	343	365	0.95
9	15	2e-05	0.0013	20.2	1.5	1	23	371	393	371	393	0.96
10	15	3.6e-07	2.3e-05	25.7	1.5	1	23	399	421	399	421	0.98
11	15	3e-06	0.00019	22.8	2.9	1	23	430	452	430	452	0.97
12	15	4.5e-06	0.00029	22.2	3.4	1	23	458	480	458	480	0.98
13	15	2.7e-06	0.00017	22.9	0.3	1	23	486	508	486	508	0.99
14	15	9.2e-06	0.00059	21.2	2.2	1	23	514	536	514	536	0.99
15	15	0.00011	0.0069	17.9	0.3	1	22	542	563	542	566	0.89

Sequence Information

Coding Sequence: atgaaCAAAATGGAATTAAATTCTTATAACGAAAGTTCTTGCAGAACTTGCTTAGGcgaatgtaataaattaacgtcaatatatgaaaataattcaGCCGATCTTACCTTTGCAAACATGATCATGTCTTTTACTTCTGTTTTgttgGAAGAAAACGATGGATTATATGGTTACATTTGTGAAAGTTGCGCCACGCAAGTGTCGAATGCGTATAAGTTTATGAAAAGATGTGAAGAGGTagatttaactttgaaattgtttcTTAATTCGTGTAAAACAGCTTTAACTGGAGGGCTGGAAATGGAATCCGATGTTATTGCCAATGACAAACAAGGAGATGTAAACATTTCAGAGATGGTTAGTTCAACTAATTTAGATGAATTACTTGAAATCGATGATGGTTGTGATTTGgtttcaaatgtaaaaaataggaaactttttgtttgtaaaatttgccaaaaaagtTATGTACAACATACTGGATTAGTGTGGCACATGAGGTTACACACGGGCGAAAGACCTTTTGTATGCAATCAATGCGGTCGAGGTTTTATAAGATCCGATGATTTGTTAAGGCATCGTCGTACTCACACTGGCGAGAGACCTTTTGTTTGTCAAATTTGTAATCGAGGATTTAAacaaaagtttcatttatcggaacATGAACGATCTCACAATGGTAAACGAGAACTTAAGTGCAAAGAATGTGGTAAATGTTTCGTAAGACATGGAGTTTTAAGAACCCACATGAGGACACATACCGGAGTAAAAGCATATTCCTGCAAATTATGCTCTAAAAGTTTTGTTGGATCTGATACTCTGACAAAACATATGAGAACACACACTGGTGAAAAACCTTATAACTGCAGCCATTGTAACCGGTCATTTGCACAATCGGATCAGTTACAAGTGCACTTTCGAATTCACTCGGGTGAAAAACCATACGTTTGCAATGTATGCAGCAAAGCTTTCACACAACAGCACGGTCTAAACGTTCATTTACTCAGTCACACAGGAGAAAGACCATTTTTGTGTGCGACTTGTGGAAAGTCGTTTATCAGATCTGATGATCTCAAAAAGCATACACGAACGCACAGTCAAGAGAGACCCTATCTGTGTACTCTTTGTCCTAAAGCCTTCATACAATCATTTCATTTATCCGAACATTTAAGAACTCACACCGAGAATAAGGAATTTTCGTGTGGTGTTTGTAACAAAACATTTTCACGTAATGGTTCACTTCGGTCACATTTAAAAACTCACACTCAAAGTTATGTCGAAAAACAGCACTCATGCAGTATATGTGAAAAGCGATTTAGTGTCAGTTACTCACTGAACAAACACATGTTGACTCATACCGGAGAAAGACCTCATCAATGTCCATTTTGTCCAAAGacATTCACTCAAACTGGTCACCTCGAAACTCATCTAAAAGTACACACAGGTGAAAAACCTTATGTTTGTAATGTTTGTAACAAAGGTTTTGCCGTTAGTTCTCGACTGACCGTCCATATGAGGAGTCACACGGGCGAGAGGCCTTATACTTGCTCACTGTGTGGAAAGGGATGTACAACATCGACAATGTTAAAAATACATGTGCGAACACACACAGGAGAAACACCTTATTTATGTCCATCTTGTCCTAAAGCATTTTCAAGGTCGGATTTACTTAATTTGCATAGAAAAAATAACGGTCATtga
Protein Sequence: MNKMELNSYNESSCRTCLGECNKLTSIYENNSADLTFANMIMSFTSVLLEENDGLYGYICESCATQVSNAYKFMKRCEEVDLTLKLFLNSCKTALTGGLEMESDVIANDKQGDVNISEMVSSTNLDELLEIDDGCDLVSNVKNRKLFVCKICQKSYVQHTGLVWHMRLHTGERPFVCNQCGRGFIRSDDLLRHRRTHTGERPFVCQICNRGFKQKFHLSEHERSHNGKRELKCKECGKCFVRHGVLRTHMRTHTGVKAYSCKLCSKSFVGSDTLTKHMRTHTGEKPYNCSHCNRSFAQSDQLQVHFRIHSGEKPYVCNVCSKAFTQQHGLNVHLLSHTGERPFLCATCGKSFIRSDDLKKHTRTHSQERPYLCTLCPKAFIQSFHLSEHLRTHTENKEFSCGVCNKTFSRNGSLRSHLKTHTQSYVEKQHSCSICEKRFSVSYSLNKHMLTHTGERPHQCPFCPKTFTQTGHLETHLKVHTGEKPYVCNVCNKGFAVSSRLTVHMRSHTGERPYTCSLCGKGCTTSTMLKIHVRTHTGETPYLCPSCPKAFSRSDLLNLHRKNNGH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00927937;
90% Identity: iTF_00271511;
80% Identity: -