Cfla003175.1
Basic Information
- Insect
- Cantharis flavilabris
- Gene Symbol
- -
- Assembly
- GCA_949152465.1
- Location
- OX424435.1:33589271-33595481[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0011 0.44 11.4 0.0 3 38 53 87 51 89 0.94 2 2 1.5e-10 5.9e-08 33.4 0.0 1 35 149 184 149 189 0.92
Sequence Information
- Coding Sequence
- ATGCCCTGGAGTTGGTTGCAGTTCAATCCAGCCGCTACGTATGTACAGGTTTCGTCCCAAGATTTTGGTTATAATAACTGCGAAGAAAATAAGCAGTCAGATTTGCAAATAAGCGTGGATTACTTCTCTTCACGTAAATCGCCTAGATGGAATTCTGAAGACCTTCAGAGAGCTATTGAACTAGTGCGCTCCGGCGTACCTATTAAACCTTCGGCAGAGCAATGTAACATCCCTGTAATGACTCTTTGGCGACGAACTAGAGCTTTAGGTGTTATTAGCAGTCGGGCGATGACATATTCGCTAAGACCACAAAGCACTTCTAATAAATTGCACAAAAATTACGAAATGTCGGAAAATTGTTTGCAAGAAGACTGTAACGACCATACTTGGCAAAACGATAGTGATGaTTACCCCAGCTTACTAAAGCTTAAAACTCCAACTTGGACACAAGAGCAACTAAAAGAAGCCATCGACGCCGTAGTGAAACAGAAAATGCGTTTTACTCAAGCTTCGTCTCGTTATGGAATTCCCAAAGGAACGCTTTATGATAATATTCTCGGAAAATCTAAGCGCATGGCTGTACTCGAGGAAGCAGGTTTGACACACAACGAAGAGGCGGCCGTGTTAGAATTTTGTTGTGATGTTTCCATTTCTCCCTACAACAGACGCACAAAAAAATCTCTTCATTCGATATTAAACTTTGTCGAAAAAATTAGACGCAATCGCGACCCCGAGTTTATGTTCACCGGTCTCTCGGGATTCAGATGGTGGTGGGCATTTTGCAAAAAACACAGTATCGTTTCGCTTTTCTACGATAATGGAACTAgcaattga
- Protein Sequence
- MPWSWLQFNPAATYVQVSSQDFGYNNCEENKQSDLQISVDYFSSRKSPRWNSEDLQRAIELVRSGVPIKPSAEQCNIPVMTLWRRTRALGVISSRAMTYSLRPQSTSNKLHKNYEMSENCLQEDCNDHTWQNDSDDYPSLLKLKTPTWTQEQLKEAIDAVVKQKMRFTQASSRYGIPKGTLYDNILGKSKRMAVLEEAGLTHNEEAAVLEFCCDVSISPYNRRTKKSLHSILNFVEKIRRNRDPEFMFTGLSGFRWWWAFCKKHSIVSLFYDNGTSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00271000;
- 90% Identity
- iTF_00271000;
- 80% Identity
- -