Cfla003174.1
Basic Information
- Insect
- Cantharis flavilabris
- Gene Symbol
- bab1
- Assembly
- GCA_949152465.1
- Location
- OX424435.1:33571553-33586383[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-17 2.3e-14 53.9 0.0 1 43 28 71 28 73 0.95 2 2 6.2 2.5e+03 -0.6 0.4 6 15 158 167 157 171 0.88
Sequence Information
- Coding Sequence
- ATGTGGCAGAAATGTTGGAGTACGAACCAAAGCCTTGTACACAATTTAAGATTTAGAGAGAGAGGACCGTTGAAATCGTGGCGACCAGAAACTATGGCAGAAGCAATTTTTTCCGTATTAAAAGAGGGTTTATCATTATCTCAAGCGGCAAGAAAGTACGATATTCCTTATCCAACCTTCGTTCTTTACGCAAATCGAGTACACAATATGTTAGGACCTTCTGCCGATGGTGGTTCGGATTTAAGGCCGAAAGGAAGAGGGAGACCTCAAAGGATATTATTAGGAGTATGGCCAGACGATCATATAAAAGGAGTAATACGTGCCGTAGTTTTTCGCGATTCTCATCATATTAAAGACGAACCGGTGTTAGCTTATCCAAGAATGCACgaCGGTGTCGGTTTACCGCCAAATTATCCAAATAGTACTTGTAGTAATGGATCCGAATCCACGGTGTCTCCAAGTATGGCAACTGCTGCGGCAGTGGCGGCGGTTGCGCAAGGTCTGAGACAGCAAATGTGCAATATGATGGCGGCAGCGCAACAACAAAATACTGCGCACGATACCGCGTTAGTTAATTCGTTATCGTTAGCAAGCCATTGTGGTACGGCTAGCATGCCGAGTAATGGTACCACGCCGATGAGTATGAGTATGAGCAATCTTGCGTCGATGAGATTGGGAAGTCCGGCGGGTAGCGTGCAAGATTTAAGAATAAGTCCGGCGGGATCGGGATTGGAAAGTCCATTATCATCGCCATTAGAATTAACAAATGTGATGGAAACGACGGGGCTTAATTTAGGTATGGGCAATAACGTAGATGTAGCCGGTATTGGAGTATCGGGCATGACTTATAAACCTGCACGGCCTTTTACTTCGCCTAGAGCAGAAAATCTCTTCCAGGAAGATATAGAAGAATTGGTAAAACCGATGCACACAACAAATTCAAGATCAAAGGACACAATGGCTTCCATAAAAATGGAACCATTGACAGAGTGCCGTGGTGAATGA
- Protein Sequence
- MWQKCWSTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDDHIKGVIRAVVFRDSHHIKDEPVLAYPRMHDGVGLPPNYPNSTCSNGSESTVSPSMATAAAVAAVAQGLRQQMCNMMAAAQQQNTAHDTALVNSLSLASHCGTASMPSNGTTPMSMSMSNLASMRLGSPAGSVQDLRISPAGSGLESPLSSPLELTNVMETTGLNLGMGNNVDVAGIGVSGMTYKPARPFTSPRAENLFQEDIEELVKPMHTTNSRSKDTMASIKMEPLTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01210114;
- 90% Identity
- iTF_00398774;
- 80% Identity
- iTF_00269682;