Cfla005629.1
Basic Information
- Insect
- Cantharis flavilabris
- Gene Symbol
- bab2
- Assembly
- GCA_949152465.1
- Location
- OX424435.1:56436399-56459060[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.2e-11 8.7e-09 36.1 0.0 1 39 376 415 376 419 0.90 2 4 1.9e-12 7.7e-10 39.4 0.1 1 39 430 468 430 472 0.95 3 4 6e-17 2.4e-14 53.8 0.0 1 45 485 530 485 530 0.97 4 4 1e-15 4.1e-13 49.9 0.0 1 39 537 576 537 581 0.92
Sequence Information
- Coding Sequence
- ATGGTGGGGCAGCAGTATTGCTTAAGATGGAATAATTATCAAACGAACATGACATCTGTTTTTcacaaattacttcaaaatgaAGATTTTGTGGACGTGACATTGGCATGCAAAGATCTATCGCTAAAAGCTCATAAAGTGGTGTTATCTGCATGTTcttcatattttcaaaagttacttttagaaaatccatgtCAACACCCCACAATAATTATGCCCCAAGACGTTTGTTATGCTGATCTTAAATTCATTATTGAATTTGTATATAAAGGAGAAATCGATGTTTCTCAAGCAGAGCTGCAGtCTTTGTTAAAAACAGCggatcaattaaaaataaagggTTTGTGTGAATCTGAAGAAAAGGATAATTCGCATTCTTCGATTTTTATACCAAGCAACAGTTGTGGTTCAAAACTTAGTCAAGTATCATCACCTAAGCactataaaaaacaaataaatagtaataaacgACATAAATTTAGAGAAGTTGATTTAGATGATTTACCGGATGAAGATTGTAAAGACAATATAGTTCAAGAAGATATATCCGATGAAGATAGTGACACACCATTAATTGTTGATGAAGCACCAAAAAGAAGGAAGTTAATAGCATCGGCTCAATCTACTCCAATTAACATGAGCAGTCATGGCTTATTGGCAGGACAGGCTTTATTCTCTCAATTATGTGAAAACGATGATTTCCCACCAGAACCCCCAGCACCTTCCGCAACACCCGTTGGAGATGTCGATCTTCAAGATCACTCGCCAACCCGTAATTTATTTCAATCATCTCATAGAACAGATTTGTCAGATGTTCACATTAAATATGAggatataaaaaaagaaactaatattaaatttgaaacattacGATCTTACGATCATGATTCAATGATGGATATGGATGCTTCACATTTATCCGGCCCTGATCATTCTATGGAGAGTCACGAAGATTCAAAACGATCTATGCATTCCATGATGATTACTCCAGAATTAATTGGAATGTTACCCGGAGTATCTGGGGGAAGGCTAGaaGGTATCAAAGATGAAAATGGTCAAATGAAAAGCAACGGTCATTCAGATGCATTATTAATAAGATCTCACACCGGAGGTCCTAAAACGTGGACTCAAGAAGATATGGAGTTAGCTTTAGATGCCTTAAGAAATCATAACATGAGTTTAACAAAAGCTTCAGCAACGTATGGTATTCCATCCACTACTCTGTGGCAACGAGCACATAGATTAGGAATTGATACACCAAAAAAGGAGGGTCCTACAAAATCATGGacggaagaaaatttaaattccgcACTAGAAGCGTTGCGAACGGGTACCATTTCTGCGAATAAAGCTAGTAAAGCATACGGAATACCTAGTAGTACATTATATAAAATAGCTAGAAGAGAAGGTATTAAATTGGCAGCGCCTTTCAATGCAGCACCAACGACATGGTCTCCAGAGGACCTAGAAAAAGCCTTAGAATCAATTAGATCAGGTCAAGCATCAGTTCAAAAAGCATCTACGGAATTTGGTATTCCTACTGGTACTTTATATGGAAGGTGTAAAAGGGAAGGCATTGAACTTTCCCGCTCGAATCCTACTCCTTGGTCAGAGGATGCAATGGGAGAAGCTTTGGAAGCTGTCAGgTTAGGACATATGTCGATAAATCAAGCTGCAATTCATTACAATCTACCATATTCATCTTTGTATGGACGATTTAAGAGAGGAGTAAAATATGACACCGAAACCATCGATTCAAATAATTCAGATAGTCAGTCTCAACCAGATTCTCAAGTTTTGGTAATGGATTATCCAAACTCACATCAACAAATTCAATATCAACATCATGGAAATAGCTGA
- Protein Sequence
- MVGQQYCLRWNNYQTNMTSVFHKLLQNEDFVDVTLACKDLSLKAHKVVLSACSSYFQKLLLENPCQHPTIIMPQDVCYADLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCESEEKDNSHSSIFIPSNSCGSKLSQVSSPKHYKKQINSNKRHKFREVDLDDLPDEDCKDNIVQEDISDEDSDTPLIVDEAPKRRKLIASAQSTPINMSSHGLLAGQALFSQLCENDDFPPEPPAPSATPVGDVDLQDHSPTRNLFQSSHRTDLSDVHIKYEDIKKETNIKFETLRSYDHDSMMDMDASHLSGPDHSMESHEDSKRSMHSMMITPELIGMLPGVSGGRLEGIKDENGQMKSNGHSDALLIRSHTGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIKLAAPFNAAPTTWSPEDLEKALESIRSGQASVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGVKYDTETIDSNNSDSQSQPDSQVLVMDYPNSHQQIQYQHHGNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00003877;
- 90% Identity
- iTF_01291426;
- 80% Identity
- iTF_00268716;