Cfla002639.1
Basic Information
- Insect
- Cantharis flavilabris
- Gene Symbol
- dl
- Assembly
- GCA_949152465.1
- Location
- OX424435.1:27591241-27593992[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-55 5.6e-51 174.0 0.0 1 169 182 346 182 346 0.96 2 2 0.52 3e+03 -0.8 0.1 36 86 519 567 512 588 0.63
Sequence Information
- Coding Sequence
- ATGGAAGTCATAGGTTCTATCAAAGAATTTAACAGCCATAAGGAAGATTGGTTTTTATATCGAGAACGACTAGAACAATATTTAGAAGCGAATAAAATTAAGAACCCAAAACGACGAATATCAATTCTGTTAACTTTACTAGATAGAGAAACTTATGAAATCCTTCATAATCTCTGCTATCCCGATCAGCTAGGGGACAAAACGTACAATCAACTTTGCAAATTATTAGAACATCATTTTTGCCAAAGGATTTCAGTTTTAAGAGAAAGAATACGTTTTTATTCGTTACGACAGAATTCAGAAGAAACAATAAACGATTGGCAATTGGAGAGTGAATTGAAAAATGATTCCTCCCAAAGTCGATCTGTAATAGCGCAATCCTTAGCTTCTCAACATCACAGCAAAGGAGTAGTAATTAAAGAggacaaaaataattataattctaaCGGTAAAACAAACATTGAAAATCCAATTAAGCCAATTAACGCATCTCAAAATACACTGATACCAAATATGACCCCCTTAAAGCGACATAAACCATATGTTCGCATTACCGAACAACCGGCATCACTGATAAGATTCAGATACGCGTGCGAAGGTTCCAGAGGATCTATTCTTGGAGTTTCCAGTACTCCAGACAACAAAACGTATCCCACAATTGAAGTCGTTGGTTTTCGTGGAAAAGCAATTGCTGTAGTTTCGTGCGTCACCACTGACCCACCCCACAGACCACATCCGTTTCAATTAGCTGGAAAATTTGGATGCAGGAAGGGAGTATGTGTAATGGATATTCCTCCCGATACTATGTCGCTAACTTTTTCGAATGTAGGCATCGAGTGCATTAAAAAGAAGGAAGTCGAAGCGGCGATTCAATTAAGGAAACAAATTCGAATTGATCCATACAATActggATTTTATTTTAACCACGAAAATATAATGTTTAATTCTGTTCGACTATGCATTCAAGTGTTCTTAGAAAATGGTGGAGAAAAGAAAATTCCATTGAGTCCCGTTATTACAAATCCAATTTATGATAAGAAATTGATGAacgaattaattataattaaaatgtcgCACTGCGTTATGACTGTGGATGGAAGCAGAAATGAAGTTATATTGCTATGCGACAAAatAGTTAAAGATGATATTCAAGTTCGATTTTATGAAAATGTGGGAGGCGAAGTAGTCTGGGAAAGCTTTGGAATATTTAGCGAAGATGATATTCATAAAAACGTGGCATTGAGCTTTAAAGtgccaaaatacaaaaaattggatATAACAGAGCCAGTTACAGTTTACATACAGTTGAAAAGACCTTCTGATGGTGAAACAAGCGAACCTCTACCTTTTCAATATTATCCGATACATTCGGaattagcAGTTATTAAACGTAAAcgttacaattttgaaaatgatgctTTACAAAGAGAATATTTGCCAAAACCTGATTTTCAACAGCCGAgtCCAATTCAGCCATACTTTTCTCCCATGCCGTACTTTCCCCCCAATTGGAATTCAAATGCTTCACCAAATTTACCAACAATGCACGGTATGCAACACTTTCCTACCAATATGGTCACGTGtcataataattcacaaaattataatattcaaatgaACGTCAACAATAATCCATATCATATTCACAACGAATTGGAACCATCATGCCGAAACGAATACATTGCTTCATCTTTTAATAACCATTTTGACGTGAACCAATCAAACGACTTGAACAATATCAGTTTGAGCGGATTGACTGATTTAGCACAATTCAATATGGAGCAATTATCTGATCAATTCCTTAATAGTCTATCGTTAGATAACATTCCTCCACAATAA
- Protein Sequence
- MEVIGSIKEFNSHKEDWFLYRERLEQYLEANKIKNPKRRISILLTLLDRETYEILHNLCYPDQLGDKTYNQLCKLLEHHFCQRISVLRERIRFYSLRQNSEETINDWQLESELKNDSSQSRSVIAQSLASQHHSKGVVIKEDKNNYNSNGKTNIENPIKPINASQNTLIPNMTPLKRHKPYVRITEQPASLIRFRYACEGSRGSILGVSSTPDNKTYPTIEVVGFRGKAIAVVSCVTTDPPHRPHPFQLAGKFGCRKGVCVMDIPPDTMSLTFSNVGIECIKKKEVEAAIQLRKQIRIDPYNTGFYFNHENIMFNSVRLCIQVFLENGGEKKIPLSPVITNPIYDKKLMNELIIIKMSHCVMTVDGSRNEVILLCDKIVKDDIQVRFYENVGGEVVWESFGIFSEDDIHKNVALSFKVPKYKKLDITEPVTVYIQLKRPSDGETSEPLPFQYYPIHSELAVIKRKRYNFENDALQREYLPKPDFQQPSPIQPYFSPMPYFPPNWNSNASPNLPTMHGMQHFPTNMVTCHNNSQNYNIQMNVNNNPYHIHNELEPSCRNEYIASSFNNHFDVNQSNDLNNISLSGLTDLAQFNMEQLSDQFLNSLSLDNIPPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00270817;
- 90% Identity
- -
- 80% Identity
- -