Cbil021374.1
Basic Information
- Insect
- Camptogramma bilineatum
- Gene Symbol
- -
- Assembly
- GCA_958496255.1
- Location
- OY292471.1:10497853-10500560[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-09 7e-06 26.3 0.0 1 45 12 56 12 56 0.94 2 2 7.9 1.1e+04 -3.1 0.0 28 42 243 258 242 259 0.77
Sequence Information
- Coding Sequence
- atgtcTCCTCGTAAAAAGAGAGGGGAGTCTTGGTCAGAAGACGATTTAAAAGCGGCCTTGAAAGCTTTACAAAAAGGTATCTTAAGTCAGCGAGCCATAGCTCTCAAGTATAAAATTCCGCGAAGAACATTGAGGGATCATTTGAAGAGTGGTCAAGATGTCAAACGTTTAGGACGAAAACCTGTCTTAACAAACGCGCAGGAAAATGATTTATGTGCTAGAATAAAGAGGTTCGCAAAAATTGGAGTACCCCTTACGCCAAAGTTCATTAGAAAGCAAGCTTTTATGTTTTGTGAGAGATTTGAAATCAAACACAACTTCAATTCCTTAAAAAGGATTGCAGGTGCTGATTGGTTAAGTCAGTTTTTGAAGAGAAACCCATCAATCAGCAAACGTAAGCCCCAAATAATGAACCCAGCTCGTGCTCAAAAATTGAACAAACCAATAGTTCAGCAACATTTCCAGAGTGTAAGTAAGTTATACGACCAGTTGGACATTCTTCAGCATCCTGAAAGATTGTATAATATGGATGAGAAAGGTTGCCGAATTACCGTCCATAAGCAGCACACAGTACTTGCAGAGAAAGGAAGTAAGAGAGTTCACCTTGTTGCACCCGAACACGCAGAAAACGTTACGATTGCAATGTGCGTCAATGCCATAGGAACAGCGATTCCTCCTATGCTCCTCTTTAAGGGGCAAAGACAAAGACCTGATCTTTCAGAAAACTTACCTGCTGGAACATTAGTTAGAATGGCACCGAAAGGGTCTATGACTGCGGACTTGTTTGTGGAATTCATCCAGCACCTAGCGAAATACAAGGTACCCGGAAAATGTTTACTCATTTTTGATGGCGCTAAATGTCATTTATCGATCGTAGCACTCGAAGAAGCagataaaaatgacattgtgttatATTGCCTCCCTTCAAACACAACGCACGAGCTACAGCCCCTGGATAAGTCCGTTAACAAGTCTTATGAACATCACTGGGATGAAGAAGTTCTCCACTTCTTATACGTTAGCGCCGACAGAGCACTCACAAAAGCCacattcaataaaatatttactcgAGTTTGGCCCAAGTGTATGACGCACAGTAACATAGTCAATGGCTTCAAGGCTACCGGTCTCTTCCCGTTCGATCCTGAAGCAATACCAGAGGATGCTTTTGCCCCATCTGTTTTATCAGAAATTCCCTGCCCCCAAACTCAGGAGCCCCTGCAAAACCCTAACTCATTAAACAATGACACTGATGACACTGATGACATCGATGACACTGATCATGATCAATTAGCCAAAATTCCAATTACACCAACAGCACAGAGACAAACAGAATCATGTAATGAAAATATCAATCCAGGCATCAAGCCCCACCTTGTGGATTATAGCTCGTCATCCGATGTTTCTTATATGGAATCAGTTTTGCAAAATCCTACATCACAAGTTACGGTAGAAGAGGAGCAGGATGAAACACTTGATGgacataaaaatttaaaacaacatgATCCGGCCGTTCCTGGTTGTTCAGGATTACAAAGATCAGCACGCGACGACACCGGTTCTGATTCAACTATTTCAGATTTGGATTCATTCGTAACTAGGCCTATTTTCAAGCAATCAAAATATTTCGCTGATAATATCTATAGTTACTCATCAGATGAATCGTCATGGGATGAAAGTCAGTGTCCTATTAACAAAGCAGAAACAACACCGAAAAAACAAATGATCTGTAATATTCCAAATAAAACTCGCTGCTCAGATGATGACATTCCATTGGCCAGTCTACAACAAAAGAAAAAGACACAATTTCATGAATTCATACCAACGCCAAACTATGCATTGACTAAATCTAAAAAGCCGCGTAAGAAAGCGATGAACTACAAAGGACAAAGAATCACTAAAGACTTATTCAATGACGAAACCGAAAAAGAAAGCAGAAGGAAAAAATATGACAAGACCATGAATAAAACTGATAAAGAGCAGAAAAGTGATAAGAGAAATAAGAAACCAAgggaaaataacaaaaatagcgAAAACAACCAGAAGAAGAAAGAGGAAGAAAAAATGAACACTGacgaaaaagaaagaaaagggAAAAAACATGACAAGACAATGAATAAAACTGATAAAGAGCAGAAAAGTgatcaaagaaataaaaacccacagaaaaatgaaaaaatagcgAAAAAATGCCAGAAGAAGAAagaggaaaaaaaaataaacacggaTGAAAAAGAAGACTGGTACTGTTATGCTTGTTGCGAAATAAAACAGTTAGATATGCGGCAATGCGAAATCTGTGGAAGATGGTACCATGAGGAGTGTGTAGGTCTCTCTAAATGTGATATAGAGTTTATTTGCCCAGATTGCTAA
- Protein Sequence
- MSPRKKRGESWSEDDLKAALKALQKGILSQRAIALKYKIPRRTLRDHLKSGQDVKRLGRKPVLTNAQENDLCARIKRFAKIGVPLTPKFIRKQAFMFCERFEIKHNFNSLKRIAGADWLSQFLKRNPSISKRKPQIMNPARAQKLNKPIVQQHFQSVSKLYDQLDILQHPERLYNMDEKGCRITVHKQHTVLAEKGSKRVHLVAPEHAENVTIAMCVNAIGTAIPPMLLFKGQRQRPDLSENLPAGTLVRMAPKGSMTADLFVEFIQHLAKYKVPGKCLLIFDGAKCHLSIVALEEADKNDIVLYCLPSNTTHELQPLDKSVNKSYEHHWDEEVLHFLYVSADRALTKATFNKIFTRVWPKCMTHSNIVNGFKATGLFPFDPEAIPEDAFAPSVLSEIPCPQTQEPLQNPNSLNNDTDDTDDIDDTDHDQLAKIPITPTAQRQTESCNENINPGIKPHLVDYSSSSDVSYMESVLQNPTSQVTVEEEQDETLDGHKNLKQHDPAVPGCSGLQRSARDDTGSDSTISDLDSFVTRPIFKQSKYFADNIYSYSSDESSWDESQCPINKAETTPKKQMICNIPNKTRCSDDDIPLASLQQKKKTQFHEFIPTPNYALTKSKKPRKKAMNYKGQRITKDLFNDETEKESRRKKYDKTMNKTDKEQKSDKRNKKPRENNKNSENNQKKKEEEKMNTDEKERKGKKHDKTMNKTDKEQKSDQRNKNPQKNEKIAKKCQKKKEEKKINTDEKEDWYCYACCEIKQLDMRQCEICGRWYHEECVGLSKCDIEFICPDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01509533;
- 90% Identity
- -
- 80% Identity
- -