Cbil014627.1
Basic Information
- Insect
- Camptogramma bilineatum
- Gene Symbol
- -
- Assembly
- GCA_958496255.1
- Location
- OY292464.1:702166-711875[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.3e-12 8.6e-09 35.6 0.0 4 39 143 179 140 183 0.89 2 4 1.9e-12 2.7e-09 37.3 0.4 2 39 195 232 194 235 0.93 3 4 4.2e-16 5.8e-13 49.0 0.2 2 45 250 294 249 294 0.96 4 4 1.3e-18 1.8e-15 57.0 0.0 1 44 301 345 301 346 0.96
Sequence Information
- Coding Sequence
- ATGCCAGGCTCCAGAACAGCCACAGTAAAATGCGAACCTCAATCTGATGAAGATGAAGACAGACTTCAGTTGCCTGAACACTTCCTAAATATTACGAGCCCCGAAGAGCTGGAAGAGCTAGCGCCGCCCGCGCCAGCCGCGCCCGCCGCCACGCCCGTCTGCGTGAAGCAGGAGCCGGGGGAATCCGCGATACACCTGGAGACCCTGGAGTCAGCTCCAAATTGCACGGGCTCTCTACTGGTGCGTCGCATGGCGATATTGAGGTCAACTGAAGTGCCTGACTCTGCTAGCTTCACGCCGCTGCAACCGATCAAGGATGAACCGTCTTCTGAAGGAGAACAGCAGCACCTGAGCAGTGATGAGTTGAGCGACTCGTGCGGTCTGTCGGAGCCGCTGCGAGGGAGCCCCAAGACCTGGACGCAGCAGGACATGGACAACGCGCTGGATGCACTCAGGAACCACAACATGAGCTTGACTAAGGCATCATCCACGTACGGCATCCCGTCGACCACACTGTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCGAAGAAGGAGGGCGCCGCCAAGTCCTGGTCCGAGGCAGACCTGCGCGCCGCTTTACACGCGCTCAGGGCCGGCGCTATATCCGCCAACAAGGCTAGTAAGGCCTATGGCATCCCGAGCAGCACTCTGTACAAGATAGCGCGTCGCGAGGGCATCCGCCTGGCGGCTCCGTTCAACGCGGCGCCCGTGGCCTGGCGGCGCGGAGACCTGGCGCGCGCCCTGGCCGCCATCCGCGCCGGCCGCGCCTCCGTGCAGCGCGCCGCCTCGCAGTACGGCATCCCCACAGGTACTCTCTACGGACGTTGCAAACGAGAAGGTATTGAATTATCTCGGTCCAACCCCACGCCGTGGTCTGAAGACGCCATGGGAGAGGCGCTAGACGCTGTCAGAGTTGGTCAGATGTCGATAAATCAGGCAGCGATTCACTACAACTTACCATACTCATCGCTTTATGGCAGATTTAAGCGCTGCAAGTACCAGACTCAGCCCATCCCACAGCAGGAAATGCAAGCCCCTCCAGAAATGGTCCACCAAGATTTAAACTACTACCAGCAAACGGCCATGTACCCGGAACCGGACCACTCCCTCCAACACTACCCGGAGTTTGTCCAGGACAACATGGATTATGGGCAAGTGTACTACAACCAGAACTTTGGCAGCATCCTGACCAGCTGA
- Protein Sequence
- MPGSRTATVKCEPQSDEDEDRLQLPEHFLNITSPEELEELAPPAPAAPAATPVCVKQEPGESAIHLETLESAPNCTGSLLVRRMAILRSTEVPDSASFTPLQPIKDEPSSEGEQQHLSSDELSDSCGLSEPLRGSPKTWTQQDMDNALDALRNHNMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEADLRAALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVAWRRGDLARALAAIRAGRASVQRAASQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALDAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQTQPIPQQEMQAPPEMVHQDLNYYQQTAMYPEPDHSLQHYPEFVQDNMDYGQVYYNQNFGSILTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01528203;
- 90% Identity
- -
- 80% Identity
- -