Basic Information

Gene Symbol
Bgb
Assembly
GCA_958496255.1
Location
OY292453.1:9691493-9706141[-]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.3e-44 2.1e-39 135.5 0.4 1 96 33 121 33 131 0.94
2 2 2e-34 5.7e-30 104.8 0.1 89 163 217 291 193 295 0.89

Sequence Information

Coding Sequence
ATGCAAGCAATGAGTGACCCCGCGTCGTTGGCAGGCATGCTTCCCTTTGACTCCATTGGACTTTATGAACAGCCCAAACCGCGGTTCATCTTCAAGATGCCTCGGGTGGTTCCTGATCAGAAAGCCAAATTTGAATCCGATGATCTCTTCAAAAGGCTGAGCCGAGAAAGTGAGGTGAGGTACACAGGGTACCGTGATCGTCCCCCTGAAGAGCGTCAGATGAGGTTCACTAGCGGCTGCCGCGAGGGTCACACCGAGGTCGCTTTCACCGCCACCGGCACCAACCTGCAGCTCGTGTTTGACCACTCACCTTACAACAACAGAGGCTGCGACTTCCAGAAAGAAAACGGCAAGTGCAAATTATTAAGGGACTCAGAAAAACACCGTTTTCTAACAATTATGCACCCTCCTAGTGAAAATAAAAAGCAACGTTCGCGAGAGCCATTTTGGAAAAGGGAGAAAAGCATTTCCCCAGAAATCGATAGTGGAAAAGCGTTCGTGATTGGAGGGCGTCGCGACGCGTCGCCGCCCTGCAACATGGCCGCCGTCCCGTCTCCCTCATCCCTCTCCAGATCACTAATTGCATTTATGATATCTCACTACACTGCTACACAGATACAACATACAGGGTTCATTGAACACGCACTCCGAGAGATTAAACGAGTCCACATAATTTCCCGGTTCATAATGAATGGAGTGTGCGTGAGATGGCGGGGTTGGATCGACTTGGAGCGATTAGATGGAGCTGGATGCTTGGAGCTCGATGAGGAGCGCGCGGCGATAGAAGACGCGGCGTTGCGCGATCAGATTGAGAGGTACAACCAGCGACTGCGGGACTTTGAAGACAAGCAACGCGCGTACCGAGAGCATGGAGACGAGCTGCGCGCGCACTCGCACGTGCACGCTCAGCGCTGCCACCAGACGCGCCAGGCGCCGCACGCCGCGCACCCCGCGCACCCACACCCCTCACACCCGGTACATATCAAACCCCACTCACAAGGAGCACTTATTTCATAA
Protein Sequence
MQAMSDPASLAGMLPFDSIGLYEQPKPRFIFKMPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFTSGCREGHTEVAFTATGTNLQLVFDHSPYNNRGCDFQKENGKCKLLRDSEKHRFLTIMHPPSENKKQRSREPFWKREKSISPEIDSGKAFVIGGRRDASPPCNMAAVPSPSSLSRSLIAFMISHYTATQIQHTGFIEHALREIKRVHIISRFIMNGVCVRWRGWIDLERLDGAGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGDELRAHSHVHAQRCHQTRQAPHAAHPAHPHPSHPVHIKPHSQGALIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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